RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 NMIQ13287 307 aaPredicted RBP11.38□□□□□ -0.59
CLN8-203ENST00000518780 KIF4BQ2VIQ3 1234 aa11.38□□□□□ -0.59
CLN8-203ENST00000518780 GIMAP6Q6P9H5 292 aa11.38□□□□□ -0.59
CLN8-203ENST00000518780 PRMT6Q96LA8 375 aaPredicted RBP11.38□□□□□ -0.59
CLN8-203ENST00000518780 STRBPQ96SI9 672 aaKnown RBP11.38□□□□□ -0.59
CLN8-203ENST00000518780 RIOK1Q9BRS2 568 aaKnown RBP11.38□□□□□ -0.59
CLN8-203ENST00000518780 CRNKL1Q9BZJ0 848 aaKnown RBP11.38□□□□□ -0.59
CLN8-203ENST00000518780 PUS7LQ9H0K6 701 aaKnown RBP11.38□□□□□ -0.59
CLN8-203ENST00000518780 TMOD2Q9NZR1 351 aa11.38□□□□□ -0.59
CLN8-203ENST00000518780 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
CLN8-203ENST00000518780 CHD4Q14839 1912 aa11.38□□□□□ -0.59
CLN8-203ENST00000518780 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 SGSM2O43147 1006 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 RHBDL3P58872 404 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 TNFAIP1Q13829 316 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 SPDYE2Q495Y8 402 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 CWC27Q6UX04 472 aaKnown RBP11.37□□□□□ -0.59
CLN8-203ENST00000518780 ADGRA1Q86SQ6 560 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 IDI2Q9BXS1 227 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 NACAP1Q9BZK3 213 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 TAF1DQ9H5J8 278 aaPredicted RBP11.37□□□□□ -0.59
CLN8-203ENST00000518780 ATP8A2Q9NTI2 1148 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 USP40Q9NVE5 1235 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 PGAP2Q9UHJ9 254 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 PSME4Q14997 1843 aa11.37□□□□□ -0.59
CLN8-203ENST00000518780 POTECB2RU33 542 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 PATL2C9JE40 543 aaKnown RBP11.36□□□□□ -0.59
CLN8-203ENST00000518780 GPAA1O43292 621 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 ENTPD3O75355 529 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 REC8O95072 547 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 MBD4O95243 580 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 TNNI2P48788 182 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
CLN8-203ENST00000518780 CDC42EP5Q6NZY7 148 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 KIAA1211Q6ZU35 1233 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 SAMD7Q7Z3H4 446 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 FAM83AQ86UY5 434 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 MIGA1Q8NAN2 632 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 FAM227BQ96M60 508 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 ESYT1Q9BSJ8 1104 aa11.36□□□□□ -0.59
CLN8-203ENST00000518780 AATFQ9NY61 560 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLN8-203ENST00000518780 ZNF70Q9UC06 446 aaPredicted RBP11.36□□□□□ -0.59
CLN8-203ENST00000518780 CCDC171Q6TFL3 1326 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 UTRNP46939 3433 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 A0A0D9SFI3 127 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 ALX1Q15699 326 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
CLN8-203ENST00000518780 APOBEC3FQ8IUX4 373 aaKnown RBP11.35□□□□□ -0.59
CLN8-203ENST00000518780 TEX11Q8IYF3 940 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 DSCC1Q9BVC3 393 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 TDRD3Q9H7E2 651 aaKnown RBP11.35□□□□□ -0.59
CLN8-203ENST00000518780 RRAGCQ9HB90 399 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
CLN8-203ENST00000518780 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 M0R2C6 588 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 WDHD1O75717 1129 aaPredicted RBP11.34□□□□□ -0.59
CLN8-203ENST00000518780 PRKCSHP14314 528 aaPredicted RBP11.34□□□□□ -0.59
CLN8-203ENST00000518780 HIRAP54198 1017 aaPredicted RBP11.34□□□□□ -0.59
CLN8-203ENST00000518780 DYNLL1P63167 89 aaKnown RBP11.34□□□□□ -0.59
CLN8-203ENST00000518780 AMOTL1Q8IY63 956 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 TRPM4Q8TD43 1214 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 SH3RF3Q8TEJ3 882 aaPredicted RBP11.34□□□□□ -0.59
CLN8-203ENST00000518780 FAM151AQ8WW52 585 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
CLN8-203ENST00000518780 HOOK2Q96ED9 719 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 SEC62Q99442 399 aaKnown RBP11.34□□□□□ -0.59
CLN8-203ENST00000518780 DHX36Q9H2U1 1008 aaKnown RBP11.34□□□□□ -0.59
CLN8-203ENST00000518780 ARMT1Q9H993 441 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 GPBP1L1Q9HC44 474 aaPredicted RBP11.34□□□□□ -0.59
CLN8-203ENST00000518780 CTNNA3Q9UI47 895 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 SLC4A4Q9Y6R1 1079 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 WDR90Q96KV7 1748 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 ZMYM6O95789 1325 aa11.34□□□□□ -0.59
CLN8-203ENST00000518780 MYH13Q9UKX3 1938 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 DOCK2Q92608 1830 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 GSG1L2A8MUP6 293 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 EGFRP00533 1210 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 CHGBP05060 677 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
CLN8-203ENST00000518780 YY1P25490 414 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 USP5P45974 858 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 SLFNL1Q499Z3 407 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 TTC6Q86TZ1 520 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
CLN8-203ENST00000518780 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
CLN8-203ENST00000518780 ZNF646O15015 1829 aaPredicted RBP11.32□□□□□ -0.6
CLN8-203ENST00000518780 MAST2Q6P0Q8 1798 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 APPP05067 770 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 NT5C2P49902 561 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 SBK1Q52WX2 424 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 ANGEL2Q5VTE6 544 aaKnown RBP11.32□□□□□ -0.6
CLN8-203ENST00000518780 CDC37L1Q7L3B6 337 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 ZNF589Q86UQ0 364 aaPredicted RBP11.32□□□□□ -0.6
CLN8-203ENST00000518780 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms