RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 PEAK1Q9H792 1746 aa9□□□□□ -0.97
CCDC6-203ENST00000518638 C21orf2O43822 256 aa8.99□□□□□ -0.97
CCDC6-203ENST00000518638 NID1P14543 1247 aa8.99□□□□□ -0.97
CCDC6-203ENST00000518638 PSMA6P60900 246 aaKnown RBP8.99□□□□□ -0.97
CCDC6-203ENST00000518638 TEAD4Q15561 434 aa8.99□□□□□ -0.97
CCDC6-203ENST00000518638 TBCELQ5QJ74 424 aa8.99□□□□□ -0.97
CCDC6-203ENST00000518638 MCTP1Q6DN14 999 aa8.99□□□□□ -0.97
CCDC6-203ENST00000518638 GAS2L2Q8NHY3 880 aa8.99□□□□□ -0.97
CCDC6-203ENST00000518638 STARD13Q9Y3M8 1113 aa8.99□□□□□ -0.97
CCDC6-203ENST00000518638 LMO7Q8WWI1 1683 aa8.99□□□□□ -0.97
CCDC6-203ENST00000518638 CPDO75976 1380 aa8.99□□□□□ -0.97
CCDC6-203ENST00000518638 BCL9O00512 1426 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 SAFB2Q14151 953 aaKnown RBP eCLIP8.98□□□□□ -0.97
CCDC6-203ENST00000518638 CHRNA2Q15822 529 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 BICDL1Q6ZP65 573 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 TXNRD3Q86VQ6 643 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 MICALL1Q8N3F8 863 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 ZDHHC1Q8WTX9 485 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 TNFRSF25Q93038 417 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 STK32BQ9NY57 414 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 LRRC37A3O60309 1634 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 AATKQ6ZMQ8 1374 aa8.98□□□□□ -0.97
CCDC6-203ENST00000518638 CRB1P82279 1406 aa8.97□□□□□ -0.97
CCDC6-203ENST00000518638 AKAP12Q02952 1782 aa8.97□□□□□ -0.97
CCDC6-203ENST00000518638 ZBTB7AO95365 584 aa8.97□□□□□ -0.97
CCDC6-203ENST00000518638 IGFBP4P22692 258 aa8.97□□□□□ -0.97
CCDC6-203ENST00000518638 WEE1P30291 646 aa8.97□□□□□ -0.97
CCDC6-203ENST00000518638 C8orf86Q6ZUL3 223 aa8.97□□□□□ -0.97
CCDC6-203ENST00000518638 STAG2Q8N3U4 1231 aa8.97□□□□□ -0.97
CCDC6-203ENST00000518638 SCG3Q8WXD2 468 aaKnown RBP8.97□□□□□ -0.97
CCDC6-203ENST00000518638 COL5A2P05997 1499 aaPredicted RBP8.96□□□□□ -0.97
CCDC6-203ENST00000518638 EML1O00423 815 aa8.96□□□□□ -0.98
CCDC6-203ENST00000518638 PPP1R12BO60237 982 aaPredicted RBP8.96□□□□□ -0.98
CCDC6-203ENST00000518638 LGR5O75473 907 aa8.96□□□□□ -0.98
CCDC6-203ENST00000518638 NOS2P35228 1153 aa8.96□□□□□ -0.98
CCDC6-203ENST00000518638 HIRAP54198 1017 aaPredicted RBP8.96□□□□□ -0.98
CCDC6-203ENST00000518638 ZC3H6P61129 1189 aaKnown RBP8.96□□□□□ -0.98
CCDC6-203ENST00000518638 NRG1Q02297 640 aaPredicted RBP8.96□□□□□ -0.98
CCDC6-203ENST00000518638 L3MBTL2Q969R5 705 aa8.96□□□□□ -0.98
CCDC6-203ENST00000518638 SERTM1A2A2V5 107 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 ELNP15502 786 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 SELPP16109 830 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 ADH7P40394 386 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 SLC15A2Q16348 729 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 DDB1Q16531 1140 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 GPR162Q16538 588 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 TRAPPC3LQ5T215 181 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 CLP1Q92989 425 aaKnown RBP8.95□□□□□ -0.98
CCDC6-203ENST00000518638 CHMP3Q9Y3E7 222 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 PARP3Q9Y6F1 533 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 PRR36Q9H6K5 1346 aa8.95□□□□□ -0.98
CCDC6-203ENST00000518638 WNK3Q9BYP7 1800 aa8.94□□□□□ -0.98
CCDC6-203ENST00000518638 TMEM88BA6NKF7 163 aa8.94□□□□□ -0.98
CCDC6-203ENST00000518638 TRIM26Q12899 539 aaPredicted RBP8.94□□□□□ -0.98
CCDC6-203ENST00000518638 TP53INP1Q96A56 240 aa8.94□□□□□ -0.98
CCDC6-203ENST00000518638 C2orf49Q9BVC5 232 aaPredicted RBP8.94□□□□□ -0.98
CCDC6-203ENST00000518638 ZNF232Q9UNY5 417 aa8.94□□□□□ -0.98
CCDC6-203ENST00000518638 POLR3AO14802 1390 aaPredicted RBP8.94□□□□□ -0.98
CCDC6-203ENST00000518638 BRD4O60885 1362 aaPredicted RBP8.94□□□□□ -0.98
CCDC6-203ENST00000518638 ADGRB1O14514 1584 aa8.94□□□□□ -0.98
CCDC6-203ENST00000518638 PAX4O43316 350 aa8.93□□□□□ -0.98
CCDC6-203ENST00000518638 NEUROD1Q13562 356 aa8.93□□□□□ -0.98
CCDC6-203ENST00000518638 OCLNQ16625 522 aa8.93□□□□□ -0.98
CCDC6-203ENST00000518638 SH3PXD2AQ5TCZ1 1133 aa8.93□□□□□ -0.98
CCDC6-203ENST00000518638 NLRP13Q86W25 1043 aa8.93□□□□□ -0.98
CCDC6-203ENST00000518638 LENG1Q96BZ8 264 aaPredicted RBP8.93□□□□□ -0.98
CCDC6-203ENST00000518638 HIRIP3Q9BW71 556 aaPredicted RBP8.93□□□□□ -0.98
CCDC6-203ENST00000518638 USTQ9Y2C2 406 aa8.93□□□□□ -0.98
CCDC6-203ENST00000518638 USP19O94966 1318 aa8.93□□□□□ -0.98
CCDC6-203ENST00000518638 TOPAZ1Q8N9V7 1692 aa8.93□□□□□ -0.98
CCDC6-203ENST00000518638 SHANK3Q9BYB0 1731 aa8.92□□□□□ -0.98
CCDC6-203ENST00000518638 PRMT3O60678 531 aa8.92□□□□□ -0.98
CCDC6-203ENST00000518638 TXLNAP40222 546 aa8.92□□□□□ -0.98
CCDC6-203ENST00000518638 TXNRD1Q16881 649 aa8.92□□□□□ -0.98
CCDC6-203ENST00000518638 ABTB2Q8N961 1025 aa8.92□□□□□ -0.98
CCDC6-203ENST00000518638 UTRNP46939 3433 aa8.92□□□□□ -0.98
CCDC6-203ENST00000518638 A0A0A0MRY4 1105 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 GRIN3BO60391 1043 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 LILRB5O75023 590 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 COBLO75128 1261 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 RAC1P63000 192 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 C20orf204Q6ZNR8 217 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 PRIMPOLQ96LW4 560 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 SLC30A3Q99726 388 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 RNF112Q9ULX5 631 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 TRAK1Q9UPV9 953 aa8.91□□□□□ -0.98
CCDC6-203ENST00000518638 GCP02774 474 aa8.9□□□□□ -0.98
CCDC6-203ENST00000518638 POLD1P28340 1107 aa8.9□□□□□ -0.98
CCDC6-203ENST00000518638 TXKP42681 527 aa8.9□□□□□ -0.98
CCDC6-203ENST00000518638 C1orf53Q5VUE5 145 aa8.9□□□□□ -0.98
CCDC6-203ENST00000518638 LRRC69Q6ZNQ3 347 aa8.9□□□□□ -0.98
CCDC6-203ENST00000518638 RETREG2Q8NC44 543 aa8.9□□□□□ -0.98
CCDC6-203ENST00000518638 NUDT16Q96DE0 195 aaKnown RBP8.9□□□□□ -0.98
CCDC6-203ENST00000518638 PDGFDQ9GZP0 370 aaPredicted RBP8.9□□□□□ -0.98
CCDC6-203ENST00000518638 CXXC1Q9P0U4 656 aaPredicted RBP8.9□□□□□ -0.98
CCDC6-203ENST00000518638 QSER1Q2KHR3 1735 aa8.9□□□□□ -0.98
CCDC6-203ENST00000518638 ARHGEF28Q8N1W1 1705 aaKnown RBP8.9□□□□□ -0.98
CCDC6-203ENST00000518638 NHSQ6T4R5 1651 aa8.9□□□□□ -0.98
CCDC6-203ENST00000518638 HSPA6P17066 643 aa8.89□□□□□ -0.99
CCDC6-203ENST00000518638 FKBP5Q13451 457 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms