RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TRIM37O94972 964 aa6.14□□□□□ -1.43
VPS13B-207ENST00000518569 LLGL2Q6P1M3 1020 aa6.14□□□□□ -1.43
VPS13B-207ENST00000518569 KIAA1211Q6ZU35 1233 aa6.14□□□□□ -1.43
VPS13B-207ENST00000518569 ACAD11Q709F0 780 aa6.14□□□□□ -1.43
VPS13B-207ENST00000518569 NPM2Q86SE8 214 aaKnown RBP6.14□□□□□ -1.43
VPS13B-207ENST00000518569 RUSC1Q9BVN2 902 aa6.14□□□□□ -1.43
VPS13B-207ENST00000518569 TMPRSS13Q9BYE2 586 aa6.14□□□□□ -1.43
VPS13B-207ENST00000518569 RNF208Q9H0X6 261 aa6.14□□□□□ -1.43
VPS13B-207ENST00000518569 GGT7Q9UJ14 662 aa6.14□□□□□ -1.43
VPS13B-207ENST00000518569 USP21Q9UK80 565 aa6.14□□□□□ -1.43
VPS13B-207ENST00000518569 WISP1O95388 367 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 CTSBP07858 339 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 TCF3P15923 654 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 MBTPS1Q14703 1052 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 Q6ZS46 218 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 METTL16Q86W50 562 aaKnown RBP6.13□□□□□ -1.43
VPS13B-207ENST00000518569 SMG8Q8ND04 991 aaKnown RBP6.13□□□□□ -1.43
VPS13B-207ENST00000518569 PHC3Q8NDX5 983 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 TMEM74Q96NL1 305 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 AKTIPQ9H8T0 292 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 SUGCTQ9HAC7 445 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 CBX8Q9HC52 389 aa6.13□□□□□ -1.43
VPS13B-207ENST00000518569 ECEL1O95672 775 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 DLGAP3O95886 979 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 HDLBPQ00341 1268 aaKnown RBP6.12□□□□□ -1.43
VPS13B-207ENST00000518569 KIF4BQ2VIQ3 1234 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 RASIP1Q5U651 963 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 ANKRD34AQ69YU3 496 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 CCDC84Q86UT8 332 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-207ENST00000518569 GRIN3AQ8TCU5 1115 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 WFDC12Q8WWY7 111 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 KCNB2Q92953 911 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 RHOVQ96L33 236 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 CCDC86Q9H6F5 360 aaKnown RBP6.12□□□□□ -1.43
VPS13B-207ENST00000518569 CYP4F12Q9HCS2 524 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 TPSG1Q9NRR2 321 aa6.12□□□□□ -1.43
VPS13B-207ENST00000518569 LMNB1P20700 586 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 ITGB7P26010 798 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 GBP2P32456 591 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-207ENST00000518569 LMNB2Q03252 620 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 PDE3AQ14432 1141 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 MAP3K11Q16584 847 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 RSPO4Q2I0M5 234 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-207ENST00000518569 NUTM2GQ5VZR2 741 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 MAP1SQ66K74 1059 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-207ENST00000518569 TXNRD3Q86VQ6 643 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 TRIM42Q8IWZ5 723 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 CEP41Q9BYV8 373 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 KCNQ5Q9NR82 932 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 KBTBD4Q9NVX7 518 aa6.11□□□□□ -1.43
VPS13B-207ENST00000518569 ZNF862O60290 1169 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 AOC2O75106 756 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 SLFN14P0C7P3 912 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 TFE3P19532 575 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-207ENST00000518569 NOS3P29474 1203 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 DIEXFQ68CQ4 756 aaKnown RBP6.1□□□□□ -1.43
VPS13B-207ENST00000518569 GPBAR1Q8TDU6 330 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 WDR18Q9BV38 432 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 ZC3H12CQ9C0D7 883 aaKnown RBP6.1□□□□□ -1.43
VPS13B-207ENST00000518569 MIR1-1HGQ9H1L0 117 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 COPRSQ9NQ92 184 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 RAD18Q9NS91 495 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 TLR6Q9Y2C9 796 aa6.1□□□□□ -1.43
VPS13B-207ENST00000518569 DYRK3O43781 588 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 TIAF1O95411 115 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 PF4P02776 101 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 LIG1P18858 919 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 IREB2P48200 963 aaKnown RBP6.09□□□□□ -1.43
VPS13B-207ENST00000518569 CAMK2GQ13555 558 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-207ENST00000518569 FDX2Q6P4F2 183 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 USP48Q86UV5 1035 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 NT5DC4Q86YG4 428 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 DZIP1LQ8IYY4 767 aaKnown RBP6.09□□□□□ -1.43
VPS13B-207ENST00000518569 ZNF654Q8IZM8 581 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 AGGF1Q8N302 714 aaeCLIP6.09□□□□□ -1.43
VPS13B-207ENST00000518569 GAL3ST3Q96A11 431 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 DDX41Q9UJV9 622 aaKnown RBP6.09□□□□□ -1.43
VPS13B-207ENST00000518569 PCDHB5Q9Y5E4 795 aa6.09□□□□□ -1.43
VPS13B-207ENST00000518569 MINDY4BA8MYZ0 360 aa6.08□□□□□ -1.44
VPS13B-207ENST00000518569 ALX3O95076 343 aa6.08□□□□□ -1.44
VPS13B-207ENST00000518569 GARTP22102 1010 aa6.08□□□□□ -1.44
VPS13B-207ENST00000518569 EIF4A3P38919 411 aaKnown RBP6.08□□□□□ -1.44
VPS13B-207ENST00000518569 SOX4Q06945 474 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-207ENST00000518569 UVSSAQ2YD98 709 aa6.08□□□□□ -1.44
VPS13B-207ENST00000518569 NKAPLQ5M9Q1 402 aa6.08□□□□□ -1.44
VPS13B-207ENST00000518569 WDR89Q96FK6 387 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-207ENST00000518569 ACSBG1Q96GR2 724 aa6.08□□□□□ -1.44
VPS13B-207ENST00000518569 TGIF2Q9GZN2 237 aa6.08□□□□□ -1.44
VPS13B-207ENST00000518569 PCDHGC5Q9Y5F6 944 aa6.08□□□□□ -1.44
VPS13B-207ENST00000518569 ROBO2Q9HCK4 1378 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 ADH5P11766 374 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 GLB1P16278 677 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 ID3Q02535 119 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 RAD51AP2Q09MP3 1159 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 ZNF394Q53GI3 561 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 ZC3H12AQ5D1E8 599 aaKnown RBP6.07□□□□□ -1.44
VPS13B-207ENST00000518569 MPRIPQ6WCQ1 1025 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 C12orf50Q8NA57 414 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-207ENST00000518569 GATAD2BQ8WXI9 593 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 FAM46AQ96IP4 442 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms