RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
CPEB4-203ENST00000517880 H3BQV1 296 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 LETM1O95202 739 aaPredicted RBP12.62□□□□□ -0.39
CPEB4-203ENST00000517880 PCP11498 1178 aaKnown RBP12.62□□□□□ -0.39
CPEB4-203ENST00000517880 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 UBE2HP62256 183 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 KRT85P78386 507 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 IFFO2Q5TF58 517 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 ATL3Q6DD88 541 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 TMTC2Q8N394 836 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 NSUN7Q8NE18 718 aaKnown RBP12.62□□□□□ -0.39
CPEB4-203ENST00000517880 WDR66Q8TBY9 1149 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 GPT2Q8TD30 523 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 ANAPC4Q9UJX5 808 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 ANGEL1Q9UNK9 670 aaKnown RBP12.62□□□□□ -0.39
CPEB4-203ENST00000517880 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 TDO2P48775 406 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 NT5C2P49902 561 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 ANTXR2P58335 489 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 MFSD6Q6ZSS7 791 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 ZNF804AQ7Z570 1209 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 PROM2Q8N271 834 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 STAG1Q8WVM7 1258 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 BRIP1Q9BX63 1249 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
CPEB4-203ENST00000517880 ANKIB1Q9P2G1 1089 aa12.62□□□□□ -0.39
CPEB4-203ENST00000517880 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
CPEB4-203ENST00000517880 KLF18A0A0U1RQI7 1052 aa12.61□□□□□ -0.39
CPEB4-203ENST00000517880 RXRBP28702 533 aa12.61□□□□□ -0.39
CPEB4-203ENST00000517880 LIFRP42702 1097 aa12.61□□□□□ -0.39
CPEB4-203ENST00000517880 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
CPEB4-203ENST00000517880 CAVIN1Q6NZI2 390 aaKnown RBP12.61□□□□□ -0.39
CPEB4-203ENST00000517880 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
CPEB4-203ENST00000517880 CHST3Q7LGC8 479 aa12.61□□□□□ -0.39
CPEB4-203ENST00000517880 SGMS1Q86VZ5 419 aa12.61□□□□□ -0.39
CPEB4-203ENST00000517880 LCORLQ8N3X6 602 aa12.61□□□□□ -0.39
CPEB4-203ENST00000517880 CCDC24Q8N4L8 307 aa12.61□□□□□ -0.39
CPEB4-203ENST00000517880 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
CPEB4-203ENST00000517880 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
CPEB4-203ENST00000517880 EPB41L4AQ9HCS5 686 aaPredicted RBP12.61□□□□□ -0.39
CPEB4-203ENST00000517880 IQSEC3Q9UPP2 1182 aaPredicted RBP12.61□□□□□ -0.39
CPEB4-203ENST00000517880 ELP1O95163 1332 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
CPEB4-203ENST00000517880 TIAM2Q8IVF5 1701 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 PTPDC1A2A3K4 754 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
CPEB4-203ENST00000517880 SH2B2O14492 632 aaPredicted RBP12.6□□□□□ -0.39
CPEB4-203ENST00000517880 CDKL5O76039 1030 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 CTDNEP1O95476 244 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 RCAN1P53805 252 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 GSTO1P78417 241 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 ZSCAN23Q3MJ62 389 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 CERS3Q8IU89 383 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 TBC1D10CQ8IV04 446 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 TDRD7Q8NHU6 1098 aaKnown RBP12.6□□□□□ -0.39
CPEB4-203ENST00000517880 IGDCC4Q8TDY8 1250 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 NSUN4Q96CB9 384 aaKnown RBP12.6□□□□□ -0.39
CPEB4-203ENST00000517880 RIOK1Q9BRS2 568 aaKnown RBP12.6□□□□□ -0.39
CPEB4-203ENST00000517880 GRPEL1Q9HAV7 217 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 PODXL2Q9NZ53 605 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 NAP1L2Q9ULW6 460 aaPredicted RBP12.6□□□□□ -0.39
CPEB4-203ENST00000517880 CNPY2Q9Y2B0 182 aa12.6□□□□□ -0.39
CPEB4-203ENST00000517880 MYH13Q9UKX3 1938 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 B4E1Z4 1266 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 CPLX1O14810 134 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 JAK2O60674 1132 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 APBA3O96018 575 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 LDHCP07864 332 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 CCT2P78371 535 aaKnown RBP12.59□□□□□ -0.39
CPEB4-203ENST00000517880 DNM1Q05193 864 aaKnown RBP12.59□□□□□ -0.39
CPEB4-203ENST00000517880 SYNE3Q6ZMZ3 975 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 CYB5R4Q7L1T6 521 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 CDC37L1Q7L3B6 337 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 CRNKL1Q9BZJ0 848 aaKnown RBP12.59□□□□□ -0.39
CPEB4-203ENST00000517880 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 BRPF3Q9ULD4 1205 aa12.59□□□□□ -0.39
CPEB4-203ENST00000517880 COL1A1P02452 1464 aaPredicted RBP12.58□□□□□ -0.4
CPEB4-203ENST00000517880 CACNA1SQ13698 1873 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 ERICH2A1L162 156 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
CPEB4-203ENST00000517880 GOLGA8BA8MQT2 603 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 PRKAB2O43741 272 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.4
CPEB4-203ENST00000517880 MECOMQ03112 1051 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 PPARAQ07869 468 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 RESTQ13127 1097 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
CPEB4-203ENST00000517880 PPP2R5BQ15173 497 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 MIGA1Q8NAN2 632 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 DDX11Q96FC9 970 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 ZSWIM5Q9P217 1185 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 GGA1Q9UJY5 639 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 HPS5Q9UPZ3 1129 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 CCDC88AQ3V6T2 1871 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 TCHHQ07283 1943 aa12.58□□□□□ -0.4
CPEB4-203ENST00000517880 DUOX1Q9NRD9 1551 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms