RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SF3A1Q15459 793 aaKnown RBP3.57□□□□□ -1.84
SKP1-204ENST00000517691 C9orf131Q5VYM1 1079 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 MPRIPQ6WCQ1 1025 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 CAPN12Q6ZSI9 719 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 PTF1AQ7RTS3 328 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 NPAS4Q8IUM7 802 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 CCDC155Q8N6L0 562 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 PNNQ9H307 717 aaKnown RBP3.57□□□□□ -1.84
SKP1-204ENST00000517691 MYH16Q9H6N6 1097 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 PCDHB11Q9Y5F2 797 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 PEAK1Q9H792 1746 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 MEGF6O75095 1541 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 LTN1O94822 1766 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 MAP4K4O95819 1239 aaPredicted RBP3.56□□□□□ -1.84
SKP1-204ENST00000517691 HSP90AB1P08238 724 aaKnown RBP3.56□□□□□ -1.84
SKP1-204ENST00000517691 PHKG2P15735 406 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 COL8A1P27658 744 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 SCTRP47872 440 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 USP4Q13107 963 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 RSPO4Q2I0M5 234 aaPredicted RBP3.56□□□□□ -1.84
SKP1-204ENST00000517691 MTHFSDQ2M296 383 aaKnown RBP3.56□□□□□ -1.84
SKP1-204ENST00000517691 DIEXFQ68CQ4 756 aaKnown RBP3.56□□□□□ -1.84
SKP1-204ENST00000517691 TEX2Q8IWB9 1127 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 EHBP1Q8NDI1 1231 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 GAS2L2Q8NHY3 880 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 SLC10A4Q96EP9 437 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 PHACTR3Q96KR7 559 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 LNPKQ9C0E8 428 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 MRS2Q9HD23 443 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 KLHL42Q9P2K6 505 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 SEPT3Q9UH03 358 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 TNS2Q63HR2 1409 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 RGPD5Q99666 1765 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 NR3C2P08235 984 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 TIMP2P16035 220 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 WEE1P30291 646 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 CABP4P57796 275 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 EZH2Q15910 746 aaKnown RBP3.56□□□□□ -1.84
SKP1-204ENST00000517691 TSNAXIP1Q2TAA8 658 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 NBPF20Q3BBV1 942 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 AKAP4Q5JQC9 854 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 CCDC146Q8IYE0 955 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 TSEN2Q8NCE0 465 aaKnown RBP3.56□□□□□ -1.84
SKP1-204ENST00000517691 RTF1Q92541 710 aaKnown RBP3.56□□□□□ -1.84
SKP1-204ENST00000517691 KCTD15Q96SI1 283 aaPredicted RBP3.56□□□□□ -1.84
SKP1-204ENST00000517691 LGR6Q9HBX8 967 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 TMOD3Q9NYL9 352 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 DNMT3LQ9UJW3 386 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 RNF114Q9Y508 228 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 MAPK8IP3Q9UPT6 1336 aa3.56□□□□□ -1.84
SKP1-204ENST00000517691 THSD7AQ9UPZ6 1657 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 SENP3-EIF4A1A0A087X0R7 540 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 GNAT3A8MTJ3 354 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 ICMTO60725 284 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 ITGA6P23229 1130 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 VAMP1P23763 118 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 ERCC5P28715 1186 aaPredicted RBP3.55□□□□□ -1.84
SKP1-204ENST00000517691 TEFQ10587 303 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 CCDC184Q52MB2 194 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 NKAPLQ5M9Q1 402 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 FAM9BQ8IZU0 186 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 MPNDQ8N594 471 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.55□□□□□ -1.84
SKP1-204ENST00000517691 GTF3C2Q8WUA4 911 aaPredicted RBP3.55□□□□□ -1.84
SKP1-204ENST00000517691 PIGBQ92521 554 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 CAMKK2Q96RR4 588 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 HINFPQ9BQA5 517 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 ANO2Q9NQ90 1003 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 PRDM10Q9NQV6 1147 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 EGFL7Q9UHF1 273 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 ANKRD26Q9UPS8 1709 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 MAP2P11137 1827 aaKnown RBP3.55□□□□□ -1.84
SKP1-204ENST00000517691 KDRP35968 1356 aa3.55□□□□□ -1.84
SKP1-204ENST00000517691 TMEM229AB2RXF0 380 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 ERVV-2B6SEH9 535 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 M0R2N6 131 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 ERVH48-1M5A8F1 160 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 PLSCR1O15162 318 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 RNMTO43148 476 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 PEX14O75381 377 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 CENPBP07199 599 aaPredicted RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 GRM5P41594 1212 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 KCNQ4P56696 695 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 RIPK4P57078 832 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 RAB15P59190 212 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 ZNF211Q13398 564 aaPredicted RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 INTS6LQ5JSJ4 861 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 MCM10Q7L590 875 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 RUNDC1Q96C34 613 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 CDV3Q9UKY7 258 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 ASAP1Q9ULH1 1129 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 RRP7AQ9Y3A4 280 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 NCAPD2Q15021 1401 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 COL3A1P02461 1466 aaPredicted RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 EP400Q96L91 3159 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 TLDC2A0PJX2 215 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 PTCD1O75127 700 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 PARNO95453 639 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 STAU1O95793 577 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 ABL1P00519 1130 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms