RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 NFICP08651 508 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CHGAP10645 457 aaKnown RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 MT3P25713 68 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CD38P28907 300 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ARID4AP29374 1257 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 TXLNAP40222 546 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 EPHB3P54753 998 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 NRLP54845 237 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SSBP2P81877 361 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 DAB2P98082 770 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 MLLT1Q03111 559 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 FOXE3Q13461 319 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CCINQ13939 588 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 COL9A2Q14055 689 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 TBC1D10BQ4KMP7 808 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SPDYAQ5MJ70 313 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 RNF20Q5VTR2 975 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 FBXL22Q6P050 247 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ARHGAP27Q6ZUM4 889 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 PALM2Q8IXS6 379 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 TMEFF1Q8IYR6 380 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SPIRE2Q8WWL2 714 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 NEU4Q8WWR8 484 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 MYLIPQ8WY64 445 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 DDX1Q92499 740 aaKnown RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 FUBP1Q96AE4 644 aaKnown RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 PWWP2AQ96N64 755 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 TMPRSS13Q9BYE2 586 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 RNF32Q9H0A6 362 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SEMA4AQ9H3S1 761 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ZNF768Q9H5H4 540 aaKnown RBP0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ZBTB3Q9H5J0 574 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ETNK1Q9HBU6 452 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 NEUROD4Q9HD90 331 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ADAM29Q9UKF5 820 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 TESMINQ9Y4I5 508 aa0.21□□□□□ -2.38
RNU6-1238P-201ENST00000517215 TRIM38O00635 465 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 MUSKO15146 869 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 NOBOXO60393 691 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 HPXP02790 462 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 AZU1P20160 251 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SELENOPP49908 381 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ICAM4Q14773 271 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 PRR16Q569H4 304 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 TXNDC11Q6PKC3 985 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SMRP1Q8NCR6 262 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 PIWIL2Q8TC59 973 aaKnown RBP0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 C7orf43Q8WVR3 580 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SMG7Q92540 1137 aaKnown RBP0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 WNT8BQ93098 351 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ZNF503Q96F45 646 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 KLHDC7BQ96G42 594 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 INTS4Q96HW7 963 aaKnown RBP0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ALPK1Q96QP1 1244 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CARS2Q9HA77 564 aaKnown RBP0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CD248Q9HCU0 757 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SEC31BQ9NQW1 1179 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 FAM217BQ9NTX9 383 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ZNF112Q9UJU3 913 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 TRIM33Q9UPN9 1127 aa0.2□□□□□ -2.38
RNU6-1238P-201ENST00000517215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ZBTB7BO15156 539 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 RAMP2O60895 175 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 MYCP01106 439 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 GHRHP01286 108 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 FAM87AP0C7U9 286 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 DRD2P14416 443 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ITIH2P19823 946 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 RAB6AP20340 208 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CDC27P30260 824 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CLCN7P51798 805 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 GJA9P57773 515 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 NLRP12P59046 1061 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 MDM2Q00987 491 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 RUSC1-AS1Q66K80 236 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 LIPIQ6XZB0 460 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 HFE2Q6ZVN8 426 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 GAREM2Q75VX8 874 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 NPAS4Q8IUM7 802 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SPACA3Q8IXA5 215 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SPEM1Q8N4L4 309 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 C1orf127Q8N9H9 656 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 HELBQ8NG08 1087 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 PRRX2Q99811 253 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SPATA25Q9BR10 227 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 RBSNQ9H1K0 784 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CWC22Q9HCG8 908 aaKnown RBP0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 OSGEPQ9NPF4 335 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CABP1Q9NZU7 370 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 MDFICQ9P1T7 246 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ANKIB1Q9P2G1 1089 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ZNF580Q9UK33 172 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 IQSEC3Q9UPP2 1182 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 PCDHB11Q9Y5F2 797 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 ACTL7BQ9Y614 415 aa0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SETD1BQ9UPS6 1966 aaKnown RBP0.19□□□□□ -2.38
RNU6-1238P-201ENST00000517215 LOC102724428A0A0B4J2F2 783 aa0.18□□□□□ -2.38
RNU6-1238P-201ENST00000517215 SFI1A8K8P3 1242 aa0.18□□□□□ -2.38
RNU6-1238P-201ENST00000517215 CDK2AP1O14519 115 aa0.18□□□□□ -2.38
RNU6-1238P-201ENST00000517215 OPLAHO14841 1288 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms