RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 CHADLQ6NUI6 762 aa6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 CDC37L1Q7L3B6 337 aa6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 MTMR14Q8NCE2 650 aa6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 FAM163AQ96GL9 167 aaPredicted RBP6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 TDRD3Q9H7E2 651 aaKnown RBP6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 HELLSQ9NRZ9 838 aa6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 ZNF70Q9UC06 446 aaPredicted RBP6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 DAGLAQ9Y4D2 1042 aa6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 COL4A5P29400 1685 aa6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 MYH13Q9UKX3 1938 aa6.54□□□□□ -1.36
SCARNA16.4-201ENST00000516956 SALL3Q9BXA9 1300 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 GPR75-ASB3A0A0A6YYF3 556 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 TCP10L2B9ZVM9 353 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 WNT10BO00744 389 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 CDC45O75419 566 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 MBD4O95243 580 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 POLR3DP05423 398 aaPredicted RBP6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 SLC3A2P08195 630 aaKnown RBP6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 TDO2P48775 406 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 GRIK5Q16478 980 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 NBPF9Q3BBW0 867 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 SUPT20HL1Q3ZLR7 823 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 MCMDC2Q4G0Z9 681 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 CWC27Q6UX04 472 aaKnown RBP6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 KRT26Q7Z3Y9 468 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 CRACR2BQ8N4Y2 399 aaPredicted RBP6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 ZNF784Q8NCA9 323 aaPredicted RBP6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 SMC1BQ8NDV3 1235 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 TRPM4Q8TD43 1214 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 PRMT6Q96LA8 375 aaPredicted RBP6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 GGA3Q9NZ52 723 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 PPP2R3BQ9Y5P8 575 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 SLC4A4Q9Y6R1 1079 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 RFX7Q2KHR2 1363 aa6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 COL1A1P02452 1464 aaPredicted RBP6.53□□□□□ -1.36
SCARNA16.4-201ENST00000516956 GAKO14976 1311 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 PITPNM2Q9BZ72 1349 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 SHTN1A0MZ66 631 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 ENTPD3O75355 529 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 TOMM70O94826 608 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 PPP4CP60510 307 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 DYNLL1P63167 89 aaKnown RBP6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 TCP10Q12799 353 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 NMIQ13287 307 aaPredicted RBP6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 SPDYE2Q495Y8 402 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 FKBP1CQ5VVH2 108 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 DCAF15Q66K64 600 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 APOBEC3HQ6NTF7 200 aaKnown RBP6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 CDC42EP5Q6NZY7 148 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 TTC6Q86TZ1 520 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 USP48Q86UV5 1035 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 MAPKAPK5Q8IW41 473 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 SH3RF3Q8TEJ3 882 aaPredicted RBP6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 TGFBRAP1Q8WUH2 860 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 ARMT1Q9H993 441 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 ZNF408Q9H9D4 720 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 ZNF287Q9HBT7 754 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 ATP8A2Q9NTI2 1148 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 CTNNA3Q9UI47 895 aa6.52□□□□□ -1.37
SCARNA16.4-201ENST00000516956 RAD50Q92878 1312 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 WDR90Q96KV7 1748 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 SCN4AP35499 1836 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 PATL2C9JE40 543 aaKnown RBP6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 GPAA1O43292 621 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 PPP1R12BO60237 982 aaPredicted RBP6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 REC8O95072 547 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 GSPT1P15170 499 aaKnown RBP6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 MCCP23508 829 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 CHMLP26374 656 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 CACNB3P54284 484 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 FSTL1Q12841 308 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 RASA3Q14644 834 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 MAP1SQ66K74 1059 aaPredicted RBP6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 FAM83AQ86UY5 434 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 SKAP1Q86WV1 359 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 C2orf69Q8N8R5 385 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 RBM46Q8TBY0 533 aaKnown RBP6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 FAM151AQ8WW52 585 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 PUS7LQ9H0K6 701 aaKnown RBP6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 NAPBQ9H115 298 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 DEFB129Q9H1M3 183 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 DHX36Q9H2U1 1008 aaKnown RBP6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 UPF2Q9HAU5 1272 aaKnown RBP6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 MCM9Q9NXL9 1143 aa6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 SAP30BPQ9UHR5 308 aaKnown RBP6.51□□□□□ -1.37
SCARNA16.4-201ENST00000516956 CCDC171Q6TFL3 1326 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 SCN9AQ15858 1988 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 RPAP1Q9BWH6 1393 aaPredicted RBP6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 TCRBV5S4A2TA0A5A2 114 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 MINDY4BA8MYZ0 360 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 POTECB2RU33 542 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 M0R2C6 588 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 EGFRP00533 1210 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 IREB2P48200 963 aaKnown RBP6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 HIRAP54198 1017 aaPredicted RBP6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 GIMAP6Q6P9H5 292 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 ARMC9Q7Z3E5 817 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 LCORLQ8N3X6 602 aa6.5□□□□□ -1.37
SCARNA16.4-201ENST00000516956 OSBP2Q969R2 916 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms