RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GRM7Q14831 915 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 AMHR2Q16671 573 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 OXLD1Q5BKU9 147 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 EXOSC6Q5RKV6 272 aaKnown RBP1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 COL13A1Q5TAT6 717 aaPredicted RBP1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 SPRYD3Q8NCJ5 442 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 SPATA3Q8NHX4 192 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 WNT8BQ93098 351 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 ZG16BQ96DA0 208 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 LOXL4Q96JB6 756 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 RNF32Q9H0A6 362 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 DOLKQ9UPQ8 538 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 TSC22D4Q9Y3Q8 395 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 H3BRJ5 948 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 INO80B-WBP1J3KQ70 363 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 PSAPP07602 524 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 FBLP22087 321 aaKnown RBP1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 KCNC1P48547 511 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 EPHB3P54753 998 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 SLURP1P55000 103 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 KRTAP10-12P60413 245 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 PTK7Q13308 1070 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 IER5Q5VY09 327 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 IGFL4Q6B9Z1 124 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 SPACA3Q8IXA5 215 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 SLC7A3Q8WY07 619 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 MYLIPQ8WY64 445 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 INO80BQ9C086 356 aaPredicted RBP1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 RASSF4Q9H2L5 321 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 MBD1Q9UIS9 605 aaPredicted RBP1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 ST6GALNAC2Q9UJ37 374 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 DAGLAQ9Y4D2 1042 aa1.06□□□□□ -2.24
RNU6-542P-201ENST00000516405 AP1G2O75843 785 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 DCAF8L2P0C7V8 631 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 TRHRP34981 398 aaPredicted RBP1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 SOX18P35713 384 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 DPTQ07507 201 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 NR1H3Q13133 447 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 NKPD1Q17RQ9 610 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 ZKSCAN2Q63HK3 967 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 ARHGAP27Q6ZUM4 889 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 FAM129CQ86XR2 697 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 TNS4Q8IZW8 715 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 HEXIM2Q96MH2 286 aaKnown RBP1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 NELL2Q99435 816 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 USP26Q9BXU7 913 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 GSX1Q9H4S2 264 aaPredicted RBP1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 SP110Q9HB58 689 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 CHIC2Q9UKJ5 165 aa1.05□□□□□ -2.24
RNU6-542P-201ENST00000516405 IRS4O14654 1257 aaPredicted RBP1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 FFAR3O14843 346 aa1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 SMNDC1O75940 238 aaKnown RBP eCLIP1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 CNR2P34972 360 aa1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 CNKSR3Q6P9H4 555 aa1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 DYMQ7RTS9 669 aa1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 ALDH16A1Q8IZ83 802 aa1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 BBXQ8WY36 941 aaPredicted RBP1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 POP1Q99575 1024 aaKnown RBP1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 C11orf16Q9NQ32 467 aa1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 POLR3EQ9NVU0 708 aa1.04□□□□□ -2.24
RNU6-542P-201ENST00000516405 A0A087X1B8 175 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 NPIPB8E9PQR5 432 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 TGFBR3LH3BV60 316 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 BACH1O14867 736 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 HPXP02790 462 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 USP17L8P0C7I0 530 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 RAC2P15153 192 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 EPB42P16452 691 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 IDH3AP50213 366 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 INHBCP55103 352 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 RING1Q06587 406 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 C19orf57Q0VDD7 668 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 RALGPS1Q5JS13 557 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 NT5DC1Q5TFE4 455 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 FAM214BQ7L5A3 538 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 TTC6Q86TZ1 520 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 PARP9Q8IXQ6 854 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 DDX1Q92499 740 aaKnown RBP1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 ZNF592Q92610 1267 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 SIRT1Q96EB6 747 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 DUSP23Q9BVJ7 150 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 SSBP3Q9BWW4 388 aaPredicted RBP1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 ZNF358Q9NW07 568 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 USP20Q9Y2K6 914 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 PCDHGA11Q9Y5H2 935 aa1.03□□□□□ -2.24
RNU6-542P-201ENST00000516405 DNAJC25-GNG10A0A024R161 153 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 SOX1O00570 391 aaPredicted RBP1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 N4BP3O15049 544 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 ASPAP45381 313 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 PSMA6P60900 246 aaKnown RBP1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 NPAS4Q8IUM7 802 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 CHST13Q8NET6 341 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 USP33Q8TEY7 942 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 KISS1RQ969F8 398 aaPredicted RBP1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 PWWP2AQ96N64 755 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 ALPK1Q96QP1 1244 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 DNAJC25Q9H1X3 360 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 C19orf44Q9H6X5 657 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms