RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 SALL1Q9NSC2 1324 aa12.68□□□□□ -0.38
LINC01843-201ENST00000515627 NFIAQ12857 509 aa12.68□□□□□ -0.38
LINC01843-201ENST00000515627 CDC42EP5Q6NZY7 148 aa12.68□□□□□ -0.38
LINC01843-201ENST00000515627 OTOP1Q7RTM1 612 aa12.68□□□□□ -0.38
LINC01843-201ENST00000515627 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
LINC01843-201ENST00000515627 ZKSCAN4Q969J2 545 aaPredicted RBP12.68□□□□□ -0.38
LINC01843-201ENST00000515627 OTUD5Q96G74 571 aa12.68□□□□□ -0.38
LINC01843-201ENST00000515627 TMOD2Q9NZR1 351 aa12.68□□□□□ -0.38
LINC01843-201ENST00000515627 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
LINC01843-201ENST00000515627 HTTP42858 3142 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 CCL15-CCL14A0A0B4J2E2 113 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 ZBTB22O15209 634 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 TRIM27P14373 513 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 MTX1Q13505 466 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 CCL15Q16663 113 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 CCDC102BQ68D86 513 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 OTUD7BQ6GQQ9 843 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 MIGA2Q7L4E1 593 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 CD99L2Q8TCZ2 262 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 WRNIP1Q96S55 665 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 CSADQ9Y600 493 aa12.67□□□□□ -0.38
LINC01843-201ENST00000515627 SEMA3EO15041 775 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 BCAR3O75815 825 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 GTF2A2P52657 109 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 TIMM10P62072 90 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 TCP10Q12799 353 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 RASGRF1Q13972 1273 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 ZFPM1Q8IX07 1006 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 FAM151AQ8WW52 585 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 DENND2AQ9ULE3 1009 aa12.66□□□□□ -0.38
LINC01843-201ENST00000515627 IRF6O14896 467 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 SRGAP3O43295 1099 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 LDHBP07195 334 aaKnown RBP12.65□□□□□ -0.38
LINC01843-201ENST00000515627 INPP5BP32019 993 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 SP3Q02447 781 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 TFCP2Q12800 502 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 ERO1BQ86YB8 467 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 ERO1AQ96HE7 468 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 GNL3LQ9NVN8 582 aaKnown RBP12.65□□□□□ -0.38
LINC01843-201ENST00000515627 ZNF112Q9UJU3 913 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 HDAC5Q9UQL6 1122 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 PTPN22Q9Y2R2 807 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 RFX7Q2KHR2 1363 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 ATRNL1Q5VV63 1379 aa12.65□□□□□ -0.38
LINC01843-201ENST00000515627 GAKO14976 1311 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 BTBD19C9JJ37 291 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 GNAI3P08754 354 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 PPIL2Q13356 520 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 TAF1CQ15572 869 aaPredicted RBP12.64□□□□□ -0.39
LINC01843-201ENST00000515627 DCAF15Q66K64 600 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 ATF7IPQ6VMQ6 1270 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 XAGE2Q96GT9 111 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 ZNF341Q9BYN7 854 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 USP40Q9NVE5 1235 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 ZSWIM8A7E2V4 1837 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 MYH2Q9UKX2 1941 aa12.64□□□□□ -0.39
LINC01843-201ENST00000515627 PDS5AQ29RF7 1337 aaKnown RBP12.63□□□□□ -0.39
LINC01843-201ENST00000515627 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
LINC01843-201ENST00000515627 CETPP11597 493 aa12.63□□□□□ -0.39
LINC01843-201ENST00000515627 SH3BP5LQ7L8J4 393 aa12.63□□□□□ -0.39
LINC01843-201ENST00000515627 ZNF384Q8TF68 577 aa12.63□□□□□ -0.39
LINC01843-201ENST00000515627 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
LINC01843-201ENST00000515627 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
LINC01843-201ENST00000515627 EFCC1Q9HA90 598 aa12.63□□□□□ -0.39
LINC01843-201ENST00000515627 ZFYVE28Q9HCC9 887 aa12.63□□□□□ -0.39
LINC01843-201ENST00000515627 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
LINC01843-201ENST00000515627 SLC34A2O95436 690 aa12.62□□□□□ -0.39
LINC01843-201ENST00000515627 SLURP2P0DP57 97 aa12.62□□□□□ -0.39
LINC01843-201ENST00000515627 PPATQ06203 517 aa12.62□□□□□ -0.39
LINC01843-201ENST00000515627 SNAPC2Q13487 334 aa12.62□□□□□ -0.39
LINC01843-201ENST00000515627 MOGSQ13724 837 aa12.62□□□□□ -0.39
LINC01843-201ENST00000515627 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.62□□□□□ -0.39
LINC01843-201ENST00000515627 FRAT1Q92837 279 aaPredicted RBP12.62□□□□□ -0.39
LINC01843-201ENST00000515627 IDI2Q9BXS1 227 aa12.62□□□□□ -0.39
LINC01843-201ENST00000515627 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
LINC01843-201ENST00000515627 DOCK2Q92608 1830 aa12.62□□□□□ -0.39
LINC01843-201ENST00000515627 RBBP6Q7Z6E9 1792 aaKnown RBP12.61□□□□□ -0.39
LINC01843-201ENST00000515627 AK9Q5TCS8 1911 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 PHF20L1A8MW92 1017 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
LINC01843-201ENST00000515627 TLR2O60603 784 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 WDHD1O75717 1129 aaPredicted RBP12.61□□□□□ -0.39
LINC01843-201ENST00000515627 RGS3P49796 1198 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 NOL9Q5SY16 702 aaKnown RBP12.61□□□□□ -0.39
LINC01843-201ENST00000515627 PI16Q6UXB8 463 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 TMEM57Q8N5G2 664 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 ARMC5Q96C12 935 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
LINC01843-201ENST00000515627 ARHGAP39Q9C0H5 1083 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
LINC01843-201ENST00000515627 DDX4Q9NQI0 724 aaKnown RBP12.61□□□□□ -0.39
LINC01843-201ENST00000515627 HMG20BQ9P0W2 317 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 ABCF2Q9UG63 623 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 KCNH4Q9UQ05 1017 aa12.61□□□□□ -0.39
LINC01843-201ENST00000515627 ENTPD3O75355 529 aa12.6□□□□□ -0.39
LINC01843-201ENST00000515627 GNAI2P04899 355 aa12.6□□□□□ -0.39
LINC01843-201ENST00000515627 CTGFP29279 349 aa12.6□□□□□ -0.39
LINC01843-201ENST00000515627 RHBDL3P58872 404 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms