RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 AP4E1Q9UPM8 1137 aa6.33□□□□□ -1.4
CXXC4-203ENST00000515509 SPRED3Q2MJR0 410 aa6.32□□□□□ -1.4
CXXC4-203ENST00000515509 CCNJLQ8IV13 435 aa6.32□□□□□ -1.4
CXXC4-203ENST00000515509 LIN7BQ9HAP6 207 aa6.32□□□□□ -1.4
CXXC4-203ENST00000515509 A0A1W2PP55 124 aa6.31□□□□□ -1.4
CXXC4-203ENST00000515509 ASPAP45381 313 aa6.31□□□□□ -1.4
CXXC4-203ENST00000515509 GRIA4P48058 902 aa6.31□□□□□ -1.4
CXXC4-203ENST00000515509 ECM1Q16610 540 aa6.31□□□□□ -1.4
CXXC4-203ENST00000515509 CORO1BQ9BR76 489 aa6.31□□□□□ -1.4
CXXC4-203ENST00000515509 TRAIPQ9BWF2 469 aa6.31□□□□□ -1.4
CXXC4-203ENST00000515509 DNAJC25Q9H1X3 360 aa6.31□□□□□ -1.4
CXXC4-203ENST00000515509 SLC5A6Q9Y289 635 aa6.31□□□□□ -1.4
CXXC4-203ENST00000515509 CPNE3O75131 537 aaKnown RBP6.3□□□□□ -1.4
CXXC4-203ENST00000515509 PAPLNO95428 1278 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 ECEL1O95672 775 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 SEZ6L2Q6UXD5 910 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 GALNT12Q8IXK2 581 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 DDX54Q8TDD1 881 aaKnown RBP6.3□□□□□ -1.4
CXXC4-203ENST00000515509 BCL7CQ8WUZ0 217 aaPredicted RBP6.3□□□□□ -1.4
CXXC4-203ENST00000515509 FAM129BQ96TA1 746 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 TCF12Q99081 682 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 TRIM56Q9BRZ2 755 aaKnown RBP6.3□□□□□ -1.4
CXXC4-203ENST00000515509 RBCK1Q9BYM8 510 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 C1GALT1Q9NS00 363 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 DCTN4Q9UJW0 460 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 DAGLAQ9Y4D2 1042 aa6.3□□□□□ -1.4
CXXC4-203ENST00000515509 DYNC1LI2O43237 492 aaPredicted RBP6.29□□□□□ -1.4
CXXC4-203ENST00000515509 PLCL1Q15111 1095 aa6.29□□□□□ -1.4
CXXC4-203ENST00000515509 OGFOD3Q6PK18 319 aa6.29□□□□□ -1.4
CXXC4-203ENST00000515509 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
CXXC4-203ENST00000515509 STK11IPQ8N1F8 1099 aa6.29□□□□□ -1.4
CXXC4-203ENST00000515509 GSX1Q9H4S2 264 aaPredicted RBP6.29□□□□□ -1.4
CXXC4-203ENST00000515509 BIN1O00499 593 aa6.28□□□□□ -1.4
CXXC4-203ENST00000515509 B3GALT4O96024 378 aa6.28□□□□□ -1.4
CXXC4-203ENST00000515509 PDE3AQ14432 1141 aa6.28□□□□□ -1.4
CXXC4-203ENST00000515509 ZNF792Q3KQV3 632 aa6.28□□□□□ -1.4
CXXC4-203ENST00000515509 CYP27C1Q4G0S4 372 aa6.28□□□□□ -1.4
CXXC4-203ENST00000515509 LGR6Q9HBX8 967 aa6.28□□□□□ -1.4
CXXC4-203ENST00000515509 PPP4R2Q9NY27 417 aa6.28□□□□□ -1.4
CXXC4-203ENST00000515509 AOC2O75106 756 aa6.27□□□□□ -1.41
CXXC4-203ENST00000515509 PDIA4P13667 645 aaKnown RBP6.27□□□□□ -1.41
CXXC4-203ENST00000515509 SPRED2Q7Z698 418 aa6.27□□□□□ -1.41
CXXC4-203ENST00000515509 WFDC3Q8IUB2 231 aa6.27□□□□□ -1.41
CXXC4-203ENST00000515509 ZSCAN29Q8IWY8 852 aaPredicted RBP6.27□□□□□ -1.41
CXXC4-203ENST00000515509 ALKBH8Q96BT7 664 aaKnown RBP6.27□□□□□ -1.41
CXXC4-203ENST00000515509 WDR18Q9BV38 432 aa6.27□□□□□ -1.41
CXXC4-203ENST00000515509 NIF3L1Q9GZT8 377 aa6.27□□□□□ -1.41
CXXC4-203ENST00000515509 ZNF576Q9H609 170 aa6.27□□□□□ -1.41
CXXC4-203ENST00000515509 MAPK1P28482 360 aa6.26□□□□□ -1.41
CXXC4-203ENST00000515509 ZNF648Q5T619 568 aaPredicted RBP6.26□□□□□ -1.41
CXXC4-203ENST00000515509 KIAA0319Q5VV43 1072 aa6.26□□□□□ -1.41
CXXC4-203ENST00000515509 MISP3Q96FF7 219 aa6.26□□□□□ -1.41
CXXC4-203ENST00000515509 IVNS1ABPQ9Y6Y0 642 aa6.26□□□□□ -1.41
CXXC4-203ENST00000515509 SYNGAP1Q96PV0 1343 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 EIF1AYO14602 144 aaKnown RBP6.25□□□□□ -1.41
CXXC4-203ENST00000515509 ITPKAP23677 461 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 PLCB3Q01970 1234 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 BNIP3Q12983 259 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 AP3B2Q13367 1082 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 CSRNP1Q96S65 589 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 EHD4Q9H223 541 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 NLRP2Q9NX02 1062 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 PPP1R9AQ9ULJ8 1098 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 TRAK1Q9UPV9 953 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.25□□□□□ -1.41
CXXC4-203ENST00000515509 CARMIL2Q6F5E8 1435 aa6.25□□□□□ -1.41
CXXC4-203ENST00000515509 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
CXXC4-203ENST00000515509 GADD45BO75293 160 aaPredicted RBP6.24□□□□□ -1.41
CXXC4-203ENST00000515509 USPL1Q5W0Q7 1092 aa6.24□□□□□ -1.41
CXXC4-203ENST00000515509 PLD6Q8N2A8 252 aaKnown RBP6.24□□□□□ -1.41
CXXC4-203ENST00000515509 NETO1Q8TDF5 533 aa6.24□□□□□ -1.41
CXXC4-203ENST00000515509 GPR182O15218 404 aa6.23□□□□□ -1.41
CXXC4-203ENST00000515509 FAM87AP0C7U9 286 aa6.23□□□□□ -1.41
CXXC4-203ENST00000515509 FUT4P22083 530 aa6.23□□□□□ -1.41
CXXC4-203ENST00000515509 CDK5R2Q13319 367 aa6.23□□□□□ -1.41
CXXC4-203ENST00000515509 ORC1Q13415 861 aa6.23□□□□□ -1.41
CXXC4-203ENST00000515509 ATG4DQ86TL0 474 aaPredicted RBP6.23□□□□□ -1.41
CXXC4-203ENST00000515509 FAM181AQ8N9Y4 354 aa6.23□□□□□ -1.41
CXXC4-203ENST00000515509 CCDC74AQ96AQ1 378 aa6.23□□□□□ -1.41
CXXC4-203ENST00000515509 PIDD1Q9HB75 910 aa6.23□□□□□ -1.41
CXXC4-203ENST00000515509 RC3H2Q9HBD1 1191 aaKnown RBP6.23□□□□□ -1.41
CXXC4-203ENST00000515509 CD8BP10966 210 aa6.22□□□□□ -1.41
CXXC4-203ENST00000515509 LIG1P18858 919 aa6.22□□□□□ -1.41
CXXC4-203ENST00000515509 PTPN12Q05209 780 aaKnown RBP6.22□□□□□ -1.41
CXXC4-203ENST00000515509 ZNF124Q15973 351 aa6.22□□□□□ -1.41
CXXC4-203ENST00000515509 TMC7Q7Z402 723 aa6.22□□□□□ -1.41
CXXC4-203ENST00000515509 FAM168AQ92567 244 aa6.22□□□□□ -1.41
CXXC4-203ENST00000515509 ATXN3LQ9H3M9 355 aa6.22□□□□□ -1.41
CXXC4-203ENST00000515509 NPHS2Q9NP85 383 aa6.22□□□□□ -1.41
CXXC4-203ENST00000515509 CRIM1Q9NZV1 1036 aa6.22□□□□□ -1.41
CXXC4-203ENST00000515509 FARP2O94887 1054 aaPredicted RBP6.21□□□□□ -1.42
CXXC4-203ENST00000515509 IGHA2P01877 340 aa6.21□□□□□ -1.42
CXXC4-203ENST00000515509 RNASE1P07998 156 aaKnown RBP6.21□□□□□ -1.42
CXXC4-203ENST00000515509 HNRNPUQ00839 825 aaKnown RBP eCLIP6.21□□□□□ -1.42
CXXC4-203ENST00000515509 GLIS3Q8NEA6 775 aa6.21□□□□□ -1.42
CXXC4-203ENST00000515509 WDR89Q96FK6 387 aaPredicted RBP6.21□□□□□ -1.42
CXXC4-203ENST00000515509 FANCD2OSQ96PS1 177 aa6.21□□□□□ -1.42
CXXC4-203ENST00000515509 CCDC86Q9H6F5 360 aaKnown RBP6.21□□□□□ -1.42
CXXC4-203ENST00000515509 ABCB6Q9NP58 842 aa6.21□□□□□ -1.42
CXXC4-203ENST00000515509 VAV3Q9UKW4 847 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms