RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 XPCQ01831 940 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC11-210ENST00000513600 SGO2Q562F6 1265 aa10.53□□□□□ -0.72
TRAPPC11-210ENST00000513600 TMCO4Q5TGY1 634 aa10.53□□□□□ -0.72
TRAPPC11-210ENST00000513600 TRIM42Q8IWZ5 723 aa10.53□□□□□ -0.72
TRAPPC11-210ENST00000513600 YIPF2Q9BWQ6 316 aa10.53□□□□□ -0.72
TRAPPC11-210ENST00000513600 ENC1O14682 589 aa10.52□□□□□ -0.73
TRAPPC11-210ENST00000513600 IGLV1-40P01703 118 aa10.52□□□□□ -0.73
TRAPPC11-210ENST00000513600 SLFN14P0C7P3 912 aa10.52□□□□□ -0.73
TRAPPC11-210ENST00000513600 RXRBP28702 533 aa10.52□□□□□ -0.73
TRAPPC11-210ENST00000513600 PSMD2Q13200 908 aa10.52□□□□□ -0.73
TRAPPC11-210ENST00000513600 KCNB2Q92953 911 aa10.52□□□□□ -0.73
TRAPPC11-210ENST00000513600 RNF19AQ9NV58 838 aa10.52□□□□□ -0.73
TRAPPC11-210ENST00000513600 ZNF862O60290 1169 aa10.51□□□□□ -0.73
TRAPPC11-210ENST00000513600 FBXO24O75426 580 aa10.51□□□□□ -0.73
TRAPPC11-210ENST00000513600 LIG1P18858 919 aa10.51□□□□□ -0.73
TRAPPC11-210ENST00000513600 RNF43Q68DV7 783 aa10.51□□□□□ -0.73
TRAPPC11-210ENST00000513600 DYMQ7RTS9 669 aa10.51□□□□□ -0.73
TRAPPC11-210ENST00000513600 STK35Q8TDR2 534 aa10.51□□□□□ -0.73
TRAPPC11-210ENST00000513600 TTF2Q9UNY4 1162 aaKnown RBP10.51□□□□□ -0.73
TRAPPC11-210ENST00000513600 AP4E1Q9UPM8 1137 aa10.51□□□□□ -0.73
TRAPPC11-210ENST00000513600 ACTL7BQ9Y614 415 aa10.51□□□□□ -0.73
TRAPPC11-210ENST00000513600 HMX2A2RU54 273 aa10.5□□□□□ -0.73
TRAPPC11-210ENST00000513600 NFIAQ12857 509 aa10.5□□□□□ -0.73
TRAPPC11-210ENST00000513600 KIF4BQ2VIQ3 1234 aa10.5□□□□□ -0.73
TRAPPC11-210ENST00000513600 ZMYM1Q5SVZ6 1142 aa10.5□□□□□ -0.73
TRAPPC11-210ENST00000513600 SV2BQ7L1I2 683 aa10.5□□□□□ -0.73
TRAPPC11-210ENST00000513600 TMC4Q7Z404 712 aa10.5□□□□□ -0.73
TRAPPC11-210ENST00000513600 CBX8Q9HC52 389 aa10.5□□□□□ -0.73
TRAPPC11-210ENST00000513600 BMP6P22004 513 aa10.49□□□□□ -0.73
TRAPPC11-210ENST00000513600 ZNF252P-AS1Q0IIN9 211 aa10.49□□□□□ -0.73
TRAPPC11-210ENST00000513600 LRRC14Q15048 493 aa10.49□□□□□ -0.73
TRAPPC11-210ENST00000513600 CDPF1Q6NVV7 123 aa10.49□□□□□ -0.73
TRAPPC11-210ENST00000513600 FBLIM1Q8WUP2 373 aa10.49□□□□□ -0.73
TRAPPC11-210ENST00000513600 EZH1Q92800 747 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC11-210ENST00000513600 WDR89Q96FK6 387 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC11-210ENST00000513600 GSX1Q9H4S2 264 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC11-210ENST00000513600 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC11-210ENST00000513600 FAM95CA0A1B0GW59 222 aa10.48□□□□□ -0.73
TRAPPC11-210ENST00000513600 PAGE1O75459 146 aa10.48□□□□□ -0.73
TRAPPC11-210ENST00000513600 ITGAEP38570 1179 aa10.48□□□□□ -0.73
TRAPPC11-210ENST00000513600 ASPAP45381 313 aa10.48□□□□□ -0.73
TRAPPC11-210ENST00000513600 MAP1SQ66K74 1059 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC11-210ENST00000513600 PAOXQ6QHF9 649 aa10.48□□□□□ -0.73
TRAPPC11-210ENST00000513600 DBNDD2Q9BQY9 259 aa10.48□□□□□ -0.73
TRAPPC11-210ENST00000513600 PPP1R9AQ9ULJ8 1098 aa10.48□□□□□ -0.73
TRAPPC11-210ENST00000513600 TMPRSS2O15393 492 aa10.47□□□□□ -0.73
TRAPPC11-210ENST00000513600 ID3Q02535 119 aa10.47□□□□□ -0.73
TRAPPC11-210ENST00000513600 SCARA3Q6AZY7 606 aa10.47□□□□□ -0.73
TRAPPC11-210ENST00000513600 ATXN3LQ9H3M9 355 aa10.47□□□□□ -0.73
TRAPPC11-210ENST00000513600 FAM105AQ9NUU6 356 aa10.47□□□□□ -0.73
TRAPPC11-210ENST00000513600 CRIM1Q9NZV1 1036 aa10.47□□□□□ -0.73
TRAPPC11-210ENST00000513600 CYP8B1Q9UNU6 501 aa10.47□□□□□ -0.73
TRAPPC11-210ENST00000513600 CELA3AP09093 270 aa10.46□□□□□ -0.73
TRAPPC11-210ENST00000513600 NFKBIBQ15653 356 aa10.46□□□□□ -0.73
TRAPPC11-210ENST00000513600 LLGL2Q6P1M3 1020 aa10.46□□□□□ -0.73
TRAPPC11-210ENST00000513600 CACNA2D2Q9NY47 1150 aa10.46□□□□□ -0.73
TRAPPC11-210ENST00000513600 RNF112Q9ULX5 631 aa10.46□□□□□ -0.73
TRAPPC11-210ENST00000513600 TRIM37O94972 964 aa10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 TAGLNQ01995 201 aaKnown RBP10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 MAP7Q14244 749 aa10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 CCDC85BQ15834 202 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 PCNX4Q63HM2 1172 aa10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 GRIN3AQ8TCU5 1115 aa10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 BCL2L13Q9BXK5 485 aa10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 ACSS3Q9H6R3 686 aa10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 MRS2Q9HD23 443 aa10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 PCDHGC5Q9Y5F6 944 aa10.45□□□□□ -0.74
TRAPPC11-210ENST00000513600 SORBS3O60504 671 aa10.44□□□□□ -0.74
TRAPPC11-210ENST00000513600 RAB6AP20340 208 aa10.44□□□□□ -0.74
TRAPPC11-210ENST00000513600 ZNF326Q5BKZ1 582 aaKnown RBP10.44□□□□□ -0.74
TRAPPC11-210ENST00000513600 GPBAR1Q8TDU6 330 aa10.44□□□□□ -0.74
TRAPPC11-210ENST00000513600 ACSBG1Q96GR2 724 aa10.44□□□□□ -0.74
TRAPPC11-210ENST00000513600 FAM161BQ96MY7 647 aa10.44□□□□□ -0.74
TRAPPC11-210ENST00000513600 NFICP08651 508 aa10.43□□□□□ -0.74
TRAPPC11-210ENST00000513600 GIMAP7Q8NHV1 300 aa10.43□□□□□ -0.74
TRAPPC11-210ENST00000513600 FANCD2OSQ96PS1 177 aa10.43□□□□□ -0.74
TRAPPC11-210ENST00000513600 ST13P50502 369 aaKnown RBP10.42□□□□□ -0.74
TRAPPC11-210ENST00000513600 TAF1CQ15572 869 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC11-210ENST00000513600 ZC3H12AQ5D1E8 599 aaKnown RBP10.42□□□□□ -0.74
TRAPPC11-210ENST00000513600 TTBK2Q6IQ55 1244 aa10.42□□□□□ -0.74
TRAPPC11-210ENST00000513600 ZDHHC13Q8IUH4 622 aa10.42□□□□□ -0.74
TRAPPC11-210ENST00000513600 MFSD14AQ96MC6 490 aa10.42□□□□□ -0.74
TRAPPC11-210ENST00000513600 SEMA6CQ9H3T2 930 aa10.42□□□□□ -0.74
TRAPPC11-210ENST00000513600 PIDD1Q9HB75 910 aa10.42□□□□□ -0.74
TRAPPC11-210ENST00000513600 MFAP1P55081 439 aaKnown RBP10.41□□□□□ -0.74
TRAPPC11-210ENST00000513600 MEI1Q5TIA1 1274 aa10.41□□□□□ -0.74
TRAPPC11-210ENST00000513600 RASIP1Q5U651 963 aa10.41□□□□□ -0.74
TRAPPC11-210ENST00000513600 SHKBP1Q8TBC3 707 aa10.41□□□□□ -0.74
TRAPPC11-210ENST00000513600 BCL11AQ9H165 835 aa10.41□□□□□ -0.74
TRAPPC11-210ENST00000513600 DISC1Q9NRI5 854 aa10.41□□□□□ -0.74
TRAPPC11-210ENST00000513600 USP31Q70CQ4 1352 aa10.4□□□□□ -0.74
TRAPPC11-210ENST00000513600 RPS26P62854 115 aaKnown RBP10.4□□□□□ -0.74
TRAPPC11-210ENST00000513600 ERVK-24P63145 666 aa10.4□□□□□ -0.74
TRAPPC11-210ENST00000513600 MPRIPQ6WCQ1 1025 aa10.4□□□□□ -0.74
TRAPPC11-210ENST00000513600 GIPC2Q8TF65 315 aa10.4□□□□□ -0.74
TRAPPC11-210ENST00000513600 CRELD1Q96HD1 420 aa10.4□□□□□ -0.74
TRAPPC11-210ENST00000513600 VTI1BQ9UEU0 232 aa10.4□□□□□ -0.74
TRAPPC11-210ENST00000513600 PRKAG2Q9UGJ0 569 aa10.4□□□□□ -0.74
TRAPPC11-210ENST00000513600 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
TRAPPC11-210ENST00000513600 CTSHP09668 335 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms