RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 CCDC191Q8NCU4 936 aa12.43□□□□□ -0.42
PTPN20-228ENST00000513266 ADAMTS19Q8TE59 1207 aa12.43□□□□□ -0.42
PTPN20-228ENST00000513266 BABAM1Q9NWV8 329 aa12.43□□□□□ -0.42
PTPN20-228ENST00000513266 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
PTPN20-228ENST00000513266 NEFMP07197 916 aa12.42□□□□□ -0.42
PTPN20-228ENST00000513266 IL1R1P14778 569 aa12.42□□□□□ -0.42
PTPN20-228ENST00000513266 TNNI2P48788 182 aa12.42□□□□□ -0.42
PTPN20-228ENST00000513266 HDGFL1Q5TGJ6 251 aa12.42□□□□□ -0.42
PTPN20-228ENST00000513266 DZIP1LQ8IYY4 767 aaKnown RBP12.42□□□□□ -0.42
PTPN20-228ENST00000513266 MYD88Q99836 296 aa12.42□□□□□ -0.42
PTPN20-228ENST00000513266 LBHD1Q9BQE6 289 aaPredicted RBP12.42□□□□□ -0.42
PTPN20-228ENST00000513266 DBF4Q9UBU7 674 aaPredicted RBP12.42□□□□□ -0.42
PTPN20-228ENST00000513266 HMGCRP04035 888 aa12.41□□□□□ -0.42
PTPN20-228ENST00000513266 INPP5BP32019 993 aa12.41□□□□□ -0.42
PTPN20-228ENST00000513266 SHHQ15465 462 aa12.41□□□□□ -0.42
PTPN20-228ENST00000513266 RIC3Q7Z5B4 369 aa12.41□□□□□ -0.42
PTPN20-228ENST00000513266 ANKRD2Q9GZV1 360 aa12.41□□□□□ -0.42
PTPN20-228ENST00000513266 HMX1Q9NP08 348 aaPredicted RBP12.41□□□□□ -0.42
PTPN20-228ENST00000513266 CWC25Q9NXE8 425 aaPredicted RBP12.41□□□□□ -0.42
PTPN20-228ENST00000513266 SERPINA10Q9UK55 444 aa12.41□□□□□ -0.42
PTPN20-228ENST00000513266 PHIPQ8WWQ0 1821 aa12.4□□□□□ -0.42
PTPN20-228ENST00000513266 PPP2R1AP30153 589 aa12.4□□□□□ -0.42
PTPN20-228ENST00000513266 CACNB3P54284 484 aa12.4□□□□□ -0.42
PTPN20-228ENST00000513266 SMAD3P84022 425 aaKnown RBP12.4□□□□□ -0.42
PTPN20-228ENST00000513266 C9orf50Q5SZB4 431 aa12.4□□□□□ -0.42
PTPN20-228ENST00000513266 C15orf52Q6ZUT6 534 aaKnown RBP12.4□□□□□ -0.42
PTPN20-228ENST00000513266 ATXN2LQ8WWM7 1075 aaKnown RBP12.4□□□□□ -0.42
PTPN20-228ENST00000513266 ASB2Q96Q27 587 aa12.4□□□□□ -0.42
PTPN20-228ENST00000513266 UHRF1Q96T88 793 aaPredicted RBP12.4□□□□□ -0.42
PTPN20-228ENST00000513266 C1QTNF1Q9BXJ1 281 aa12.4□□□□□ -0.42
PTPN20-228ENST00000513266 HYPKQ9NX55 129 aa12.4□□□□□ -0.42
PTPN20-228ENST00000513266 TTF2Q9UNY4 1162 aaKnown RBP12.4□□□□□ -0.42
PTPN20-228ENST00000513266 KCNJ4P48050 445 aa12.39□□□□□ -0.43
PTPN20-228ENST00000513266 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
PTPN20-228ENST00000513266 HCN4Q9Y3Q4 1203 aa12.39□□□□□ -0.43
PTPN20-228ENST00000513266 IGHMBP2P38935 993 aaKnown RBP12.38□□□□□ -0.43
PTPN20-228ENST00000513266 CHRNDQ07001 517 aa12.38□□□□□ -0.43
PTPN20-228ENST00000513266 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
PTPN20-228ENST00000513266 COA7Q96BR5 231 aa12.38□□□□□ -0.43
PTPN20-228ENST00000513266 LRFN3Q9BTN0 628 aa12.38□□□□□ -0.43
PTPN20-228ENST00000513266 RLFQ13129 1914 aa12.38□□□□□ -0.43
PTPN20-228ENST00000513266 CRKP46108 304 aa12.37□□□□□ -0.43
PTPN20-228ENST00000513266 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
PTPN20-228ENST00000513266 GRIN2CQ14957 1233 aa12.37□□□□□ -0.43
PTPN20-228ENST00000513266 MFSD14BQ5SR56 506 aa12.37□□□□□ -0.43
PTPN20-228ENST00000513266 ZNF804AQ7Z570 1209 aa12.37□□□□□ -0.43
PTPN20-228ENST00000513266 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
PTPN20-228ENST00000513266 PHAXQ9H814 394 aaKnown RBP12.37□□□□□ -0.43
PTPN20-228ENST00000513266 TAF5LO75529 589 aa12.36□□□□□ -0.43
PTPN20-228ENST00000513266 MAP3K21Q5TCX8 1036 aa12.36□□□□□ -0.43
PTPN20-228ENST00000513266 DCAF15Q66K64 600 aa12.36□□□□□ -0.43
PTPN20-228ENST00000513266 NECAB3Q96P71 396 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-228ENST00000513266 THEGQ9P2T0 379 aa12.36□□□□□ -0.43
PTPN20-228ENST00000513266 GJD2Q9UKL4 321 aa12.36□□□□□ -0.43
PTPN20-228ENST00000513266 REV3LO60673 3130 aa12.36□□□□□ -0.43
PTPN20-228ENST00000513266 RPAP1Q9BWH6 1393 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-228ENST00000513266 CHL1O00533 1208 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 CXCL11O14625 94 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 HOXB7P09629 217 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 GRIK5Q16478 980 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 FAM83AQ86UY5 434 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 ANKRD13CQ8N6S4 541 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 TRIB2Q92519 343 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 MPHOSPH8Q99549 860 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 METTL22Q9BUU2 404 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-228ENST00000513266 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
PTPN20-228ENST00000513266 PLXNA1Q9UIW2 1896 aa12.34□□□□□ -0.43
PTPN20-228ENST00000513266 A0A0G2JLL6 359 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-228ENST00000513266 ITGA6P23229 1130 aa12.34□□□□□ -0.43
PTPN20-228ENST00000513266 RIPK4P57078 832 aa12.34□□□□□ -0.43
PTPN20-228ENST00000513266 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
PTPN20-228ENST00000513266 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
PTPN20-228ENST00000513266 PRRT2Q7Z6L0 340 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-228ENST00000513266 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-228ENST00000513266 MAPK8IP3Q9UPT6 1336 aa12.34□□□□□ -0.43
PTPN20-228ENST00000513266 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
PTPN20-228ENST00000513266 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
PTPN20-228ENST00000513266 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
PTPN20-228ENST00000513266 LHX8Q68G74 356 aa12.33□□□□□ -0.44
PTPN20-228ENST00000513266 PPM1EQ8WY54 764 aa12.33□□□□□ -0.44
PTPN20-228ENST00000513266 SLC45A1Q9Y2W3 748 aa12.33□□□□□ -0.44
PTPN20-228ENST00000513266 IGKV5-2P06315 115 aa12.32□□□□□ -0.44
PTPN20-228ENST00000513266 FAM110CQ1W6H9 321 aa12.32□□□□□ -0.44
PTPN20-228ENST00000513266 FKBP1CQ5VVH2 108 aa12.32□□□□□ -0.44
PTPN20-228ENST00000513266 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
PTPN20-228ENST00000513266 GADL1Q6ZQY3 521 aa12.32□□□□□ -0.44
PTPN20-228ENST00000513266 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
PTPN20-228ENST00000513266 TDRD7Q8NHU6 1098 aaKnown RBP12.32□□□□□ -0.44
PTPN20-228ENST00000513266 EPHX3Q9H6B9 360 aa12.32□□□□□ -0.44
PTPN20-228ENST00000513266 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
PTPN20-228ENST00000513266 DUSP27Q5VZP5 1158 aa12.31□□□□□ -0.44
PTPN20-228ENST00000513266 SENP6Q9GZR1 1112 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-228ENST00000513266 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
PTPN20-228ENST00000513266 CHD9Q3L8U1 2897 aa12.31□□□□□ -0.44
PTPN20-228ENST00000513266 CCND3P30281 292 aaPredicted RBP12.3□□□□□ -0.44
PTPN20-228ENST00000513266 ATN1P54259 1190 aaPredicted RBP12.3□□□□□ -0.44
PTPN20-228ENST00000513266 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
PTPN20-228ENST00000513266 BADQ92934 168 aa12.3□□□□□ -0.44
PTPN20-228ENST00000513266 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms