RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 DYNLL1P63167 89 aaKnown RBP12.55□□□□□ -0.4
PTPN20-227ENST00000513159 TTF1Q15361 905 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-227ENST00000513159 SLC9C2Q5TAH2 1124 aa12.55□□□□□ -0.4
PTPN20-227ENST00000513159 ANGEL2Q5VTE6 544 aaKnown RBP12.55□□□□□ -0.4
PTPN20-227ENST00000513159 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-227ENST00000513159 LDHDQ86WU2 507 aa12.55□□□□□ -0.4
PTPN20-227ENST00000513159 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
PTPN20-227ENST00000513159 ZNF70Q9UC06 446 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-227ENST00000513159 ZNF532Q9HCE3 1301 aa12.55□□□□□ -0.4
PTPN20-227ENST00000513159 CNTNAP1P78357 1384 aa12.55□□□□□ -0.4
PTPN20-227ENST00000513159 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
PTPN20-227ENST00000513159 IGSF3O75054 1194 aa12.54□□□□□ -0.4
PTPN20-227ENST00000513159 WDHD1O75717 1129 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-227ENST00000513159 TOMM70O94826 608 aa12.54□□□□□ -0.4
PTPN20-227ENST00000513159 CYP7A1P22680 504 aa12.54□□□□□ -0.4
PTPN20-227ENST00000513159 BTDP43251 543 aa12.54□□□□□ -0.4
PTPN20-227ENST00000513159 PPP4CP60510 307 aa12.54□□□□□ -0.4
PTPN20-227ENST00000513159 MAP3K12Q12852 859 aa12.54□□□□□ -0.4
PTPN20-227ENST00000513159 NFIAQ12857 509 aa12.54□□□□□ -0.4
PTPN20-227ENST00000513159 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
PTPN20-227ENST00000513159 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
PTPN20-227ENST00000513159 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
PTPN20-227ENST00000513159 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-227ENST00000513159 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
PTPN20-227ENST00000513159 ADM5C9JUS6 153 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 TRAF5O00463 557 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 SDSP20132 328 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 RGS3P49796 1198 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 UBE3CQ15386 1083 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 CHADLQ6NUI6 762 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 ZFPM1Q8IX07 1006 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 RBM46Q8TBY0 533 aaKnown RBP12.53□□□□□ -0.4
PTPN20-227ENST00000513159 SH3RF3Q8TEJ3 882 aaPredicted RBP12.53□□□□□ -0.4
PTPN20-227ENST00000513159 OSBP2Q969R2 916 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 EVI5LQ96CN4 794 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
PTPN20-227ENST00000513159 PUS7LQ9H0K6 701 aaKnown RBP12.53□□□□□ -0.4
PTPN20-227ENST00000513159 DDX4Q9NQI0 724 aaKnown RBP12.53□□□□□ -0.4
PTPN20-227ENST00000513159 AATFQ9NY61 560 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN20-227ENST00000513159 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 PITPNM2Q9BZ72 1349 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
PTPN20-227ENST00000513159 RNF113AO15541 343 aaKnown RBP12.52□□□□□ -0.41
PTPN20-227ENST00000513159 LDHCP07864 332 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 GSTO1P78417 241 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 ZMYM1Q5SVZ6 1142 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 PRAMEF18Q5VWM3 479 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 USP48Q86UV5 1035 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 CNTROBQ8N137 903 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 TEPSINQ96N21 525 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 IL25Q9H293 177 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 PASKQ96RG2 1323 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 SSC5DA1L4H1 1573 aa12.52□□□□□ -0.41
PTPN20-227ENST00000513159 PAPPA2Q9BXP8 1791 aa12.51□□□□□ -0.41
PTPN20-227ENST00000513159 M0R2C6 588 aa12.51□□□□□ -0.41
PTPN20-227ENST00000513159 SH3BP5LQ7L8J4 393 aa12.51□□□□□ -0.41
PTPN20-227ENST00000513159 FSD1Q9BTV5 496 aa12.51□□□□□ -0.41
PTPN20-227ENST00000513159 IDI2Q9BXS1 227 aa12.51□□□□□ -0.41
PTPN20-227ENST00000513159 VEZTQ9HBM0 779 aa12.51□□□□□ -0.41
PTPN20-227ENST00000513159 A0A0D9SFI3 127 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 TCP10L2B9ZVM9 353 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 FOXP2O15409 715 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 PRKAB2O43741 272 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 SLURP2P0DP57 97 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 RASA3Q14644 834 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 FKBP1CQ5VVH2 108 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 KRT26Q7Z3Y9 468 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 SMC1BQ8NDV3 1235 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 APPBP2Q92624 585 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 RILPL2Q969X0 211 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
PTPN20-227ENST00000513159 FAM227BQ96M60 508 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPN20-227ENST00000513159 TMEM39BQ9GZU3 492 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 ARMT1Q9H993 441 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
PTPN20-227ENST00000513159 OTOFQ9HC10 1997 aa12.5□□□□□ -0.41
PTPN20-227ENST00000513159 SMIM22K7EJ46 135 aa12.49□□□□□ -0.41
PTPN20-227ENST00000513159 MBD4O95243 580 aa12.49□□□□□ -0.41
PTPN20-227ENST00000513159 EVX2Q03828 476 aa12.49□□□□□ -0.41
PTPN20-227ENST00000513159 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-227ENST00000513159 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-227ENST00000513159 CCDC129Q6ZRS4 1044 aa12.49□□□□□ -0.41
PTPN20-227ENST00000513159 CDC37L1Q7L3B6 337 aa12.49□□□□□ -0.41
PTPN20-227ENST00000513159 APOBEC3FQ8IUX4 373 aaKnown RBP12.49□□□□□ -0.41
PTPN20-227ENST00000513159 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
PTPN20-227ENST00000513159 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
PTPN20-227ENST00000513159 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
PTPN20-227ENST00000513159 DDTLA6NHG4 134 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-227ENST00000513159 MYO1BO43795 1136 aa12.48□□□□□ -0.41
PTPN20-227ENST00000513159 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
PTPN20-227ENST00000513159 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-227ENST00000513159 TCP10Q12799 353 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms