RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 MIGA1Q8NAN2 632 aa18.68■□□□□ 0.58
SQSTM1-214ENST00000512234 DEFB129Q9H1M3 183 aa18.68■□□□□ 0.58
SQSTM1-214ENST00000512234 MROH7-TTC4A0A0A0MT08 1334 aa18.68■□□□□ 0.58
SQSTM1-214ENST00000512234 MYH2Q9UKX2 1941 aa18.67■□□□□ 0.58
SQSTM1-214ENST00000512234 MYO1BO43795 1136 aa18.67■□□□□ 0.58
SQSTM1-214ENST00000512234 HSPA6P17066 643 aa18.67■□□□□ 0.58
SQSTM1-214ENST00000512234 CYP7A1P22680 504 aa18.67■□□□□ 0.58
SQSTM1-214ENST00000512234 PDE1AP54750 535 aa18.67■□□□□ 0.58
SQSTM1-214ENST00000512234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.67■□□□□ 0.58
SQSTM1-214ENST00000512234 MRIQ9BWK5 157 aa18.67■□□□□ 0.58
SQSTM1-214ENST00000512234 TMEM39BQ9GZU3 492 aa18.67■□□□□ 0.58
SQSTM1-214ENST00000512234 AATFQ9NY61 560 aaKnown RBP eCLIP18.67■□□□□ 0.58
SQSTM1-214ENST00000512234 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
SQSTM1-214ENST00000512234 APLP1P51693 650 aa18.66■□□□□ 0.58
SQSTM1-214ENST00000512234 RASA3Q14644 834 aa18.66■□□□□ 0.58
SQSTM1-214ENST00000512234 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.66■□□□□ 0.58
SQSTM1-214ENST00000512234 GAKO14976 1311 aa18.66■□□□□ 0.58
SQSTM1-214ENST00000512234 CNTNAP1P78357 1384 aa18.66■□□□□ 0.58
SQSTM1-214ENST00000512234 MMP14P50281 582 aa18.66■□□□□ 0.58
SQSTM1-214ENST00000512234 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
SQSTM1-214ENST00000512234 GPATCH3Q96I76 525 aa18.66■□□□□ 0.58
SQSTM1-214ENST00000512234 PITPNM2Q9BZ72 1349 aa18.65■□□□□ 0.58
SQSTM1-214ENST00000512234 RHBDL3P58872 404 aa18.65■□□□□ 0.58
SQSTM1-214ENST00000512234 NBPF12Q5TAG4 269 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-214ENST00000512234 SLC9C2Q5TAH2 1124 aa18.65■□□□□ 0.58
SQSTM1-214ENST00000512234 SH3RF3Q8TEJ3 882 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-214ENST00000512234 DDX4Q9NQI0 724 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-214ENST00000512234 GPR75-ASB3A0A0A6YYF3 556 aa18.64■□□□□ 0.57
SQSTM1-214ENST00000512234 PDE6AP16499 860 aa18.64■□□□□ 0.57
SQSTM1-214ENST00000512234 PICALMQ13492 652 aa18.64■□□□□ 0.57
SQSTM1-214ENST00000512234 APOBEC3FQ8IUX4 373 aaKnown RBP18.64■□□□□ 0.57
SQSTM1-214ENST00000512234 FAM163AQ96GL9 167 aaPredicted RBP18.64■□□□□ 0.57
SQSTM1-214ENST00000512234 FAM198AQ9UFP1 575 aa18.64■□□□□ 0.57
SQSTM1-214ENST00000512234 TTC41PQ6P2S7 1318 aa18.63■□□□□ 0.57
SQSTM1-214ENST00000512234 ZNF532Q9HCE3 1301 aa18.63■□□□□ 0.57
SQSTM1-214ENST00000512234 MAP3K12Q12852 859 aa18.63■□□□□ 0.57
SQSTM1-214ENST00000512234 PCNTO95613 3336 aa18.63■□□□□ 0.57
SQSTM1-214ENST00000512234 GSTO1P78417 241 aa18.63■□□□□ 0.57
SQSTM1-214ENST00000512234 CCDC136Q96JN2 1154 aa18.63■□□□□ 0.57
SQSTM1-214ENST00000512234 STAP2Q9UGK3 403 aa18.63■□□□□ 0.57
SQSTM1-214ENST00000512234 TCRBV5S4A2TA0A5A2 114 aa18.62■□□□□ 0.57
SQSTM1-214ENST00000512234 TMEM88BA6NKF7 163 aa18.62■□□□□ 0.57
SQSTM1-214ENST00000512234 WDHD1O75717 1129 aaPredicted RBP18.62■□□□□ 0.57
SQSTM1-214ENST00000512234 LDHCP07864 332 aa18.62■□□□□ 0.57
SQSTM1-214ENST00000512234 RGS3P49796 1198 aa18.62■□□□□ 0.57
SQSTM1-214ENST00000512234 TTF1Q15361 905 aaPredicted RBP18.62■□□□□ 0.57
SQSTM1-214ENST00000512234 SLC4A8Q2Y0W8 1093 aa18.62■□□□□ 0.57
SQSTM1-214ENST00000512234 TEPSINQ96N21 525 aa18.62■□□□□ 0.57
SQSTM1-214ENST00000512234 ABT1Q9ULW3 272 aaKnown RBP18.62■□□□□ 0.57
SQSTM1-214ENST00000512234 GLRX3O76003 335 aaKnown RBP18.61■□□□□ 0.57
SQSTM1-214ENST00000512234 SLF2Q8IX21 1173 aa18.61■□□□□ 0.57
SQSTM1-214ENST00000512234 TMOD2Q9NZR1 351 aa18.61■□□□□ 0.57
SQSTM1-214ENST00000512234 MKRN1Q9UHC7 482 aaKnown RBP18.61■□□□□ 0.57
SQSTM1-214ENST00000512234 SSC5DA1L4H1 1573 aa18.61■□□□□ 0.57
SQSTM1-214ENST00000512234 ECM29Q5VYK3 1845 aa18.61■□□□□ 0.57
SQSTM1-214ENST00000512234 DOCK2Q92608 1830 aa18.61■□□□□ 0.57
SQSTM1-214ENST00000512234 UBE2Q2LH0YL09 131 aa18.6■□□□□ 0.57
SQSTM1-214ENST00000512234 ERC2O15083 957 aa18.6■□□□□ 0.57
SQSTM1-214ENST00000512234 GRM1Q13255 1194 aa18.6■□□□□ 0.57
SQSTM1-214ENST00000512234 ADD2P35612 726 aa18.6■□□□□ 0.57
SQSTM1-214ENST00000512234 SH3BP5LQ7L8J4 393 aa18.6■□□□□ 0.57
SQSTM1-214ENST00000512234 MAPKAPK5Q8IW41 473 aa18.6■□□□□ 0.57
SQSTM1-214ENST00000512234 TEX11Q8IYF3 940 aa18.6■□□□□ 0.57
SQSTM1-214ENST00000512234 TTLL12Q14166 644 aaPredicted RBP18.59■□□□□ 0.57
SQSTM1-214ENST00000512234 MIGA2Q7L4E1 593 aa18.59■□□□□ 0.57
SQSTM1-214ENST00000512234 KBTBD3Q8NAB2 608 aa18.59■□□□□ 0.57
SQSTM1-214ENST00000512234 TGFBRAP1Q8WUH2 860 aa18.59■□□□□ 0.57
SQSTM1-214ENST00000512234 ARMT1Q9H993 441 aa18.59■□□□□ 0.57
SQSTM1-214ENST00000512234 GBA2Q9HCG7 927 aaPredicted RBP18.59■□□□□ 0.57
SQSTM1-214ENST00000512234 DDTLA6NHG4 134 aaPredicted RBP18.58■□□□□ 0.57
SQSTM1-214ENST00000512234 LCORLQ8N3X6 602 aa18.58■□□□□ 0.57
SQSTM1-214ENST00000512234 SEC62Q99442 399 aaKnown RBP18.58■□□□□ 0.57
SQSTM1-214ENST00000512234 PUS7LQ9H0K6 701 aaKnown RBP18.58■□□□□ 0.57
SQSTM1-214ENST00000512234 CREBZFQ9NS37 354 aa18.58■□□□□ 0.57
SQSTM1-214ENST00000512234 MAST2Q6P0Q8 1798 aa18.58■□□□□ 0.56
SQSTM1-214ENST00000512234 TRIM6-TRIM34B2RNG4 842 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 PRKAB2O43741 272 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 RILPL2Q969X0 211 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 RIOK1Q9BRS2 568 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 NOL10Q9BSC4 688 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 FSD1Q9BTV5 496 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 SAP30BPQ9UHR5 308 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 MAGEB6P1A0A0J9YX57 407 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 FAM196BA6NMK8 535 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 TNNI2P48788 182 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 PPP4CP60510 307 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 EVX2Q03828 476 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 TNFAIP1Q13829 316 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 PAXIP1Q6ZW49 1069 aaPredicted RBP18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 SAPCD2Q86UD0 394 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 IDI2Q9BXS1 227 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 RFX7Q2KHR2 1363 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 TRPM7Q96QT4 1865 aa18.57■□□□□ 0.56
SQSTM1-214ENST00000512234 MBD4O95243 580 aa18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 BAG3O95817 575 aa18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 HUNKP57058 714 aa18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 CYP4F22Q6NT55 531 aa18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 CENPQQ7L2Z9 268 aaPredicted RBP18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 ZSCAN29Q8IWY8 852 aaPredicted RBP18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 C2orf69Q8N8R5 385 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms