RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 ZSWIM5Q9P217 1185 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 ANAPC4Q9UJX5 808 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 CCDC192P0DO97 292 aa17.34■□□□□ 0.37
SNCAIP-216ENST00000512146 TPRNQ4KMQ1 711 aa17.34■□□□□ 0.37
SNCAIP-216ENST00000512146 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
SNCAIP-216ENST00000512146 ZSCAN30Q86W11 494 aa17.34■□□□□ 0.37
SNCAIP-216ENST00000512146 RIOK1Q9BRS2 568 aaKnown RBP17.34■□□□□ 0.37
SNCAIP-216ENST00000512146 CDKL5O76039 1030 aa17.33■□□□□ 0.37
SNCAIP-216ENST00000512146 METAP2P50579 478 aaKnown RBP eCLIP17.33■□□□□ 0.37
SNCAIP-216ENST00000512146 CTDSPL2Q05D32 466 aa17.33■□□□□ 0.37
SNCAIP-216ENST00000512146 TMED8Q6PL24 325 aaPredicted RBP17.33■□□□□ 0.37
SNCAIP-216ENST00000512146 MFSD6Q6ZSS7 791 aa17.33■□□□□ 0.37
SNCAIP-216ENST00000512146 SENP2Q9HC62 589 aa17.33■□□□□ 0.37
SNCAIP-216ENST00000512146 RTEL1Q9NZ71 1219 aa17.33■□□□□ 0.37
SNCAIP-216ENST00000512146 IQSEC3Q9UPP2 1182 aaPredicted RBP17.33■□□□□ 0.37
SNCAIP-216ENST00000512146 ZBTB43O43298 467 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 PPFIA3O75145 1194 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 KDM4AO75164 1064 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 TDO2P48775 406 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 GUCY1B3Q02153 619 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 NTRK3Q16288 839 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 TMEM67Q5HYA8 995 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 BRAPQ7Z569 592 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 RNF41Q9H4P4 317 aaPredicted RBP17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 INCENPQ9NQS7 918 aa17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 FAM217BQ9NTX9 383 aaPredicted RBP17.33■□□□□ 0.36
SNCAIP-216ENST00000512146 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 IRS2Q9Y4H2 1338 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 CASZ1Q86V15 1759 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 MAGEB6P1A0A0J9YX57 407 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 NR1I2O75469 434 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 ADRA2BP18089 450 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 FOSBP53539 338 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 TRAPPC3LQ5T215 181 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 CPLX2Q6PUV4 134 aaKnown RBP17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 ZNF384Q8TF68 577 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 BCL11BQ9C0K0 894 aaPredicted RBP17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 RAI14Q9P0K7 980 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 ABCF2Q9UG63 623 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 CACNA1SQ13698 1873 aa17.32■□□□□ 0.36
SNCAIP-216ENST00000512146 CDC27P30260 824 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 RCAN1P53805 252 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 BICD2Q8TD16 824 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 FTOQ9C0B1 505 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 TNMDQ9H2S6 317 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 NOL7Q9UMY1 257 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 AFF2P51816 1311 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 IFIT3O14879 490 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 IGSF3O75054 1194 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 RFC4P35249 363 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 PPARAQ07869 468 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 RAB11FIP4Q86YS3 637 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 BRIP1Q9BX63 1249 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 POLR3EQ9NVU0 708 aa17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 TRPC5Q9UL62 973 aaPredicted RBP17.31■□□□□ 0.36
SNCAIP-216ENST00000512146 STK36Q9NRP7 1315 aa17.3■□□□□ 0.36
SNCAIP-216ENST00000512146 TAF1P21675 1872 aa17.3■□□□□ 0.36
SNCAIP-216ENST00000512146 KLRK1P26718 216 aa17.3■□□□□ 0.36
SNCAIP-216ENST00000512146 HIBADHP31937 336 aaKnown RBP17.3■□□□□ 0.36
SNCAIP-216ENST00000512146 KIF23Q02241 960 aaPredicted RBP17.3■□□□□ 0.36
SNCAIP-216ENST00000512146 OTUD7BQ6GQQ9 843 aa17.3■□□□□ 0.36
SNCAIP-216ENST00000512146 SEPT12Q8IYM1 358 aa17.3■□□□□ 0.36
SNCAIP-216ENST00000512146 TMTC2Q8N394 836 aa17.3■□□□□ 0.36
SNCAIP-216ENST00000512146 MYH15Q9Y2K3 1946 aa17.3■□□□□ 0.36
SNCAIP-216ENST00000512146 SBF2Q86WG5 1849 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 YEATS4O95619 227 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 FGRP09769 529 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 TYRO3Q06418 890 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 NFIXQ14938 502 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 CAMK4Q16566 473 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 MEX3CQ5U5Q3 659 aaKnown RBP17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 FAM196AQ6ZSG2 479 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 ENGASEQ8NFI3 743 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 NSUN4Q96CB9 384 aaKnown RBP17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 LRRC4BQ9NT99 713 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 MRVI1Q9Y6F6 885 aa17.29■□□□□ 0.36
SNCAIP-216ENST00000512146 A0A1W2PQ27 194 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 A0A1W2PQ64 194 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 A0A1W2PQD8 194 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 GOLGA8AA7E2F4 631 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 CEBPZQ03701 1054 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 SART3Q15020 963 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 NFXL1Q6ZNB6 911 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 MICU3Q86XE3 530 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 CCDC39Q9UFE4 941 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 CTAGE5O15320 804 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 RANBP6O60518 1105 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 PCP11498 1178 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 IFNAR1P17181 557 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 SNW1Q13573 536 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 CCAR1Q8IX12 1150 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms