RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 SALL1Q9NSC2 1324 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 TAF5LO75529 589 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 MAP4K4O95819 1239 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-228ENST00000511676 HSPA4P34932 840 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 ZAP70P43403 619 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 VASPP50552 380 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-228ENST00000511676 ZNF157P51786 506 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-228ENST00000511676 NMIQ13287 307 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-228ENST00000511676 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 CWC27Q6UX04 472 aaKnown RBP10.92□□□□□ -0.66
NR1I3-228ENST00000511676 APPBP2Q92624 585 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 LSG1Q9H089 658 aaKnown RBP10.92□□□□□ -0.66
NR1I3-228ENST00000511676 HMG20BQ9P0W2 317 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 DOCK2Q92608 1830 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 SNED1Q8TER0 1413 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
NR1I3-228ENST00000511676 PITPNM2Q9BZ72 1349 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 ADAMTSL1Q8N6G6 1762 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 VIL1P09327 827 aaKnown RBP10.91□□□□□ -0.66
NR1I3-228ENST00000511676 HIBADHP31937 336 aaKnown RBP10.91□□□□□ -0.66
NR1I3-228ENST00000511676 MAP3K12Q12852 859 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 SCARF1Q14162 830 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 RNF20Q5VTR2 975 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 ZNF804AQ7Z570 1209 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
NR1I3-228ENST00000511676 MAP4K1Q92918 833 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 FAM84BQ96KN1 310 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-228ENST00000511676 DSCC1Q9BVC3 393 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 HDAC9Q9UKV0 1011 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 TRPM7Q96QT4 1865 aa10.91□□□□□ -0.66
NR1I3-228ENST00000511676 RPAP1Q9BWH6 1393 aaPredicted RBP10.9□□□□□ -0.66
NR1I3-228ENST00000511676 ZMYM6O95789 1325 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 A0A0D9SFI3 127 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 UNCXA6NJT0 531 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 ECE2O60344 883 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 CYP2E1P05181 493 aaPredicted RBP10.9□□□□□ -0.66
NR1I3-228ENST00000511676 ADD2P35612 726 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 MCM2P49736 904 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 INHBEP58166 350 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 DGKZQ13574 1117 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 TSGA10IPQ3SY00 556 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 USP48Q86UV5 1035 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 VPS37DQ86XT2 251 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 KIF2CQ99661 725 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 GLIS2Q9BZE0 524 aaPredicted RBP10.9□□□□□ -0.66
NR1I3-228ENST00000511676 TM6SF1Q9BZW5 370 aa10.9□□□□□ -0.66
NR1I3-228ENST00000511676 TRAF5O00463 557 aa10.89□□□□□ -0.67
NR1I3-228ENST00000511676 PSMD14O00487 310 aa10.89□□□□□ -0.67
NR1I3-228ENST00000511676 ZKSCAN1P17029 563 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-228ENST00000511676 BCAMP50895 628 aa10.89□□□□□ -0.67
NR1I3-228ENST00000511676 SREBF2Q12772 1141 aa10.89□□□□□ -0.67
NR1I3-228ENST00000511676 ARHGEF6Q15052 776 aa10.89□□□□□ -0.67
NR1I3-228ENST00000511676 KIF4BQ2VIQ3 1234 aa10.89□□□□□ -0.67
NR1I3-228ENST00000511676 SPTY2D1Q68D10 685 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-228ENST00000511676 CERS3Q8IU89 383 aa10.89□□□□□ -0.67
NR1I3-228ENST00000511676 EDC3Q96F86 508 aaKnown RBP10.89□□□□□ -0.67
NR1I3-228ENST00000511676 FAM227BQ96M60 508 aa10.89□□□□□ -0.67
NR1I3-228ENST00000511676 MAST3O60307 1309 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 MAST2Q6P0Q8 1798 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 USP17L3A6NCW0 530 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 USP17L4A6NCW7 530 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 RIMBP2O15034 1052 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 ST18O60284 1047 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 USP17L8P0C7I0 530 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 IL1R1P14778 569 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 GNAT2P19087 354 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 GPSM2P81274 684 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 KRT32Q14532 448 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 NECTIN1Q15223 517 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 NOM1Q5C9Z4 860 aaKnown RBP10.88□□□□□ -0.67
NR1I3-228ENST00000511676 OTUD7BQ6GQQ9 843 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 USP17L1Q7RTZ2 530 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 ARMC9Q7Z3E5 817 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 TDRD7Q8NHU6 1098 aaKnown RBP10.88□□□□□ -0.67
NR1I3-228ENST00000511676 TBC1D16Q8TBP0 767 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 WDR66Q8TBY9 1149 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 MCOLN1Q9GZU1 580 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 IL25Q9H293 177 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 ANTXR1Q9H6X2 564 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-228ENST00000511676 CTNNA3Q9UI47 895 aa10.88□□□□□ -0.67
NR1I3-228ENST00000511676 TCRBV5S4A2TA0A5A2 114 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 MYO1BO43795 1136 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 AOC2O75106 756 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 WDHD1O75717 1129 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-228ENST00000511676 UFL1O94874 794 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 PDE6AP16499 860 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 GYG1P46976 350 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
NR1I3-228ENST00000511676 SLC9C2Q5TAH2 1124 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 RSBN1LQ6PCB5 846 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-228ENST00000511676 TBC1D22AQ8WUA7 517 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 COA1Q9GZY4 146 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 DBNDD1Q9H9R9 158 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 PIH1D3Q9NQM4 214 aaKnown RBP10.87□□□□□ -0.67
NR1I3-228ENST00000511676 SUGT1Q9Y2Z0 365 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 MYH7P12883 1935 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 TAF1P21675 1872 aa10.87□□□□□ -0.67
NR1I3-228ENST00000511676 COL1A1P02452 1464 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms