RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SRCIN1Q9C0H9 1055 aa5.62□□□□□ -1.51
CHD1-207ENST00000511628 PICK1Q9NRD5 415 aa5.62□□□□□ -1.51
CHD1-207ENST00000511628 HYAL3O43820 417 aaPredicted RBP5.61□□□□□ -1.51
CHD1-207ENST00000511628 ECEL1O95672 775 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 TGFB1P01137 390 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 CTSBP07858 339 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 GSTP1P09211 210 aaKnown RBP5.61□□□□□ -1.51
CHD1-207ENST00000511628 LIG1P18858 919 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 FMR1Q06787 632 aaKnown RBP eCLIP5.61□□□□□ -1.51
CHD1-207ENST00000511628 FAAP100Q0VG06 881 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 CDPF1Q6NVV7 123 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 TPTE2Q6XPS3 522 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 SND1Q7KZF4 910 aaKnown RBP eCLIP5.61□□□□□ -1.51
CHD1-207ENST00000511628 SULF2Q8IWU5 870 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 SHKBP1Q8TBC3 707 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 TBC1D32Q96NH3 1257 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 EMILIN2Q9BXX0 1053 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 CEP44Q9C0F1 390 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 NRSN2Q9GZP1 204 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 SSU72Q9NP77 194 aaKnown RBP5.61□□□□□ -1.51
CHD1-207ENST00000511628 WWC3Q9ULE0 1092 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 LEMD3Q9Y2U8 911 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 DAGLAQ9Y4D2 1042 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 ACTL7BQ9Y614 415 aa5.61□□□□□ -1.51
CHD1-207ENST00000511628 RNGTTO60942 597 aaKnown RBP5.6□□□□□ -1.51
CHD1-207ENST00000511628 P4HBP07237 508 aaKnown RBP5.6□□□□□ -1.51
CHD1-207ENST00000511628 NFICP08651 508 aa5.6□□□□□ -1.51
CHD1-207ENST00000511628 TMCO4Q5TGY1 634 aa5.6□□□□□ -1.51
CHD1-207ENST00000511628 INTS5Q6P9B9 1019 aaKnown RBP5.6□□□□□ -1.51
CHD1-207ENST00000511628 LGR6Q9HBX8 967 aa5.6□□□□□ -1.51
CHD1-207ENST00000511628 CCDC9Q9Y3X0 531 aaKnown RBP5.6□□□□□ -1.51
CHD1-207ENST00000511628 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.59□□□□□ -1.51
CHD1-207ENST00000511628 LMNB1P20700 586 aa5.59□□□□□ -1.51
CHD1-207ENST00000511628 ARNTP27540 789 aa5.59□□□□□ -1.51
CHD1-207ENST00000511628 ID3Q02535 119 aa5.59□□□□□ -1.51
CHD1-207ENST00000511628 EAPPQ56P03 285 aaPredicted RBP5.59□□□□□ -1.51
CHD1-207ENST00000511628 DUSP27Q5VZP5 1158 aa5.59□□□□□ -1.51
CHD1-207ENST00000511628 MAP1SQ66K74 1059 aaPredicted RBP5.59□□□□□ -1.51
CHD1-207ENST00000511628 ZDHHC13Q8IUH4 622 aa5.59□□□□□ -1.51
CHD1-207ENST00000511628 SETDB2Q96T68 719 aa5.59□□□□□ -1.51
CHD1-207ENST00000511628 METTL22Q9BUU2 404 aaPredicted RBP5.59□□□□□ -1.51
CHD1-207ENST00000511628 WDR18Q9BV38 432 aa5.59□□□□□ -1.51
CHD1-207ENST00000511628 ATXN3LQ9H3M9 355 aa5.59□□□□□ -1.51
CHD1-207ENST00000511628 CCDC86Q9H6F5 360 aaKnown RBP5.59□□□□□ -1.51
CHD1-207ENST00000511628 TTF2Q9UNY4 1162 aaKnown RBP5.59□□□□□ -1.51
CHD1-207ENST00000511628 ANKRD33BA6NCL7 494 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 FBXO24O75426 580 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 NME2P22392 152 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 EIF4BP23588 611 aaKnown RBP5.58□□□□□ -1.52
CHD1-207ENST00000511628 MFAP1P55081 439 aaKnown RBP5.58□□□□□ -1.52
CHD1-207ENST00000511628 CYP27A1Q02318 531 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 FRMD6Q96NE9 622 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 KRT82Q9NSB4 513 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 FAM105AQ9NUU6 356 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 PIM2Q9P1W9 311 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 FAM8A1Q9UBU6 413 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 PPM1HQ9ULR3 514 aa5.58□□□□□ -1.52
CHD1-207ENST00000511628 USP17L7P0C7H9 530 aa5.57□□□□□ -1.52
CHD1-207ENST00000511628 LRRC14Q15048 493 aa5.57□□□□□ -1.52
CHD1-207ENST00000511628 RGS22Q8NE09 1264 aa5.57□□□□□ -1.52
CHD1-207ENST00000511628 OSBPL7Q9BZF2 842 aa5.57□□□□□ -1.52
CHD1-207ENST00000511628 SEMA6CQ9H3T2 930 aa5.57□□□□□ -1.52
CHD1-207ENST00000511628 C12orf49Q9H741 205 aa5.57□□□□□ -1.52
CHD1-207ENST00000511628 PRKAG2Q9UGJ0 569 aa5.57□□□□□ -1.52
CHD1-207ENST00000511628 PPP1R9AQ9ULJ8 1098 aa5.57□□□□□ -1.52
CHD1-207ENST00000511628 CYP26A1O43174 497 aa5.56□□□□□ -1.52
CHD1-207ENST00000511628 PRPF40AO75400 957 aaKnown RBP5.56□□□□□ -1.52
CHD1-207ENST00000511628 F13BP05160 661 aa5.56□□□□□ -1.52
CHD1-207ENST00000511628 ARHGAP27Q6ZUM4 889 aa5.56□□□□□ -1.52
CHD1-207ENST00000511628 WDR89Q96FK6 387 aaPredicted RBP5.56□□□□□ -1.52
CHD1-207ENST00000511628 NECAB3Q96P71 396 aaPredicted RBP5.56□□□□□ -1.52
CHD1-207ENST00000511628 LRRC4CQ9HCJ2 640 aa5.56□□□□□ -1.52
CHD1-207ENST00000511628 ANGEL1Q9UNK9 670 aaKnown RBP5.56□□□□□ -1.52
CHD1-207ENST00000511628 SYNGAP1Q96PV0 1343 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 TMPRSS2O15393 492 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 ZNF862O60290 1169 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 HCLS1P14317 486 aaPredicted RBP5.55□□□□□ -1.52
CHD1-207ENST00000511628 GNA15P30679 374 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 CD97P48960 835 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 XPCQ01831 940 aaPredicted RBP5.55□□□□□ -1.52
CHD1-207ENST00000511628 CPSF6Q16630 551 aaKnown RBP eCLIP5.55□□□□□ -1.52
CHD1-207ENST00000511628 KIF4BQ2VIQ3 1234 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 CYP27C1Q4G0S4 372 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 DIEXFQ68CQ4 756 aaKnown RBP5.55□□□□□ -1.52
CHD1-207ENST00000511628 LLGL2Q6P1M3 1020 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 ZAR1Q86SH2 424 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 SMYD4Q8IYR2 804 aaPredicted RBP5.55□□□□□ -1.52
CHD1-207ENST00000511628 C3orf58Q8NDZ4 430 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 EZH1Q92800 747 aaPredicted RBP5.55□□□□□ -1.52
CHD1-207ENST00000511628 ACSS3Q9H6R3 686 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 CRIM1Q9NZV1 1036 aa5.55□□□□□ -1.52
CHD1-207ENST00000511628 FAM170BA6NMN3 283 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 PSMD2Q13200 908 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 TTLL4Q14679 1199 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 CDC37L1Q7L3B6 337 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 STK35Q8TDR2 534 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 GPBAR1Q8TDU6 330 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 ELMO3Q96BJ8 720 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 FANCD2OSQ96PS1 177 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 DUSP9Q99956 384 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms