RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 COL13A1Q5TAT6 717 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-209ENST00000511124 PCSK9Q8NBP7 692 aaKnown RBP3.42□□□□□ -1.86
CLOCK-209ENST00000511124 FAM151AQ8WW52 585 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 SIL1Q9H173 461 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 PGAP2Q9UHJ9 254 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 CTNNA3Q9UI47 895 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 MON2Q7Z3U7 1717 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 COL18A1P39060 1754 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 RAD21O60216 631 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 ADCY3O60266 1144 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 EFCAB14O75071 495 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 CABYRO75952 493 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 SASH1O94885 1247 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 SLC25A27O95847 323 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 HMGCRP04035 888 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 SUPT20HL2P0C7V6 817 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 FLIIQ13045 1269 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 MAP2K5Q13163 448 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 PTF1AQ7RTS3 328 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 OTUD5Q96G74 571 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 PRRX2Q99811 253 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 ISCA1Q9BUE6 129 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 GOPCQ9HD26 462 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 CD209Q9NNX6 404 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 USP40Q9NVE5 1235 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 HCN4Q9Y3Q4 1203 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 MYOM1P52179 1685 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 ADAMTS7Q9UKP4 1686 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 RGPD8O14715 1765 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-209ENST00000511124 ELL2O00472 640 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-209ENST00000511124 CHL1O00533 1208 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 KPNA6O60684 536 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 CTNND1O60716 968 aaKnown RBP3.42□□□□□ -1.86
CLOCK-209ENST00000511124 PSMC4P43686 418 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 RASA3Q14644 834 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 NAA16Q6N069 864 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-209ENST00000511124 C15orf52Q6ZUT6 534 aaKnown RBP3.42□□□□□ -1.86
CLOCK-209ENST00000511124 TEX11Q8IYF3 940 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 NUP133Q8WUM0 1156 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 NRBP1Q9UHY1 535 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 PASKQ96RG2 1323 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 ZNF541Q9H0D2 1346 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 ERICH2A1L162 156 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PI4KAP2A4QPH2 592 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L15C9J2P7 530 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L13C9JLJ4 530 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L11C9JVI0 530 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L18D6R9N7 530 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L22D6RA61 530 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L17D6RBQ6 530 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L19D6RCP7 530 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L20D6RJB6 530 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 STRNO43815 780 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 ITGBL1O95965 494 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-209ENST00000511124 GNAI2P04899 355 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 POTEJP0CG39 1038 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 RGS19P49795 217 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L24Q0WX57 530 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 TTLL7Q6ZT98 887 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 RASAL3Q86YV0 1011 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 IFNL1Q8IU54 200 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 ZNF444Q8N0Y2 327 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PI4KAP1Q8N8J0 262 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PROCA1Q8NCQ7 364 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-209ENST00000511124 GPRC5AQ8NFJ5 357 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 CHURC1Q8WUH1 139 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PLA2G12BQ9BX93 195 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 ELP3Q9H9T3 547 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 ADD3Q9UEY8 706 aaKnown RBP3.41□□□□□ -1.86
CLOCK-209ENST00000511124 SWAP70Q9UH65 585 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 RTL9Q8NET4 1388 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 TMEM265A0A087WTH1 108 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 TCP10L2B9ZVM9 353 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 APAF1O14727 1248 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 NEFLP07196 543 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 FBLN1P23142 703 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 CRKP46108 304 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 KCNJ6P48051 423 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 GPSM2P81274 684 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 TRDNQ13061 729 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PPIGQ13427 754 aaKnown RBP eCLIP3.41□□□□□ -1.86
CLOCK-209ENST00000511124 SART3Q15020 963 aaKnown RBP3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PKN1Q16512 942 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 ALDH1L2Q3SY69 923 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 SYNE3Q6ZMZ3 975 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PXYLP1Q8TE99 480 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PI4KBQ9UBF8 816 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 SRRDQ9UH36 339 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 C5P01031 1676 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 HAX1O00165 279 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PDE4BQ07343 736 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 GPR153Q6NV75 609 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 LMBR1LQ6UX01 489 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 RSPH3Q86UC2 560 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 TMEM199Q8N511 208 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 DNAJC5GQ8N7S2 189 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 ZNF579Q8NAF0 562 aaKnown RBP3.41□□□□□ -1.86
CLOCK-209ENST00000511124 CFHR5Q9BXR6 569 aa3.41□□□□□ -1.86
CLOCK-209ENST00000511124 ZNF70Q9UC06 446 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-209ENST00000511124 PTPN22Q9Y2R2 807 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms