RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 GATAD2BQ8WXI9 593 aa8.71□□□□□ -1.02
CHD1-206ENST00000511067 CBX8Q9HC52 389 aa8.71□□□□□ -1.02
CHD1-206ENST00000511067 KRT82Q9NSB4 513 aa8.71□□□□□ -1.02
CHD1-206ENST00000511067 CACNA2D2Q9NY47 1150 aa8.71□□□□□ -1.02
CHD1-206ENST00000511067 CDC25BP30305 580 aa8.7□□□□□ -1.02
CHD1-206ENST00000511067 APOBRQ0VD83 1088 aa8.7□□□□□ -1.02
CHD1-206ENST00000511067 GPAT2Q6NUI2 795 aa8.7□□□□□ -1.02
CHD1-206ENST00000511067 TXNDC11Q6PKC3 985 aa8.7□□□□□ -1.02
CHD1-206ENST00000511067 MCF2L2Q86YR7 1114 aa8.7□□□□□ -1.02
CHD1-206ENST00000511067 GAL3ST3Q96A11 431 aa8.7□□□□□ -1.02
CHD1-206ENST00000511067 MKL2Q9ULH7 1088 aa8.7□□□□□ -1.02
CHD1-206ENST00000511067 STRIP2Q9ULQ0 834 aa8.7□□□□□ -1.02
CHD1-206ENST00000511067 PCDHB5Q9Y5E4 795 aa8.7□□□□□ -1.02
CHD1-206ENST00000511067 FAM221AA4D161 298 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 CILPO75339 1184 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 F13A1P00488 732 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 SOX9P48436 509 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 SNRPNP63162 240 aaKnown RBP8.69□□□□□ -1.02
CHD1-206ENST00000511067 MPP2Q14168 576 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 SUZ12Q15022 739 aaKnown RBP8.69□□□□□ -1.02
CHD1-206ENST00000511067 SETDB1Q15047 1291 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 POU4F3Q15319 338 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 HP1BP3Q5SSJ5 553 aaPredicted RBP8.69□□□□□ -1.02
CHD1-206ENST00000511067 HGSNATQ68CP4 663 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 SLITRK4Q8IW52 837 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 CORO1BQ9BR76 489 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 UBP1Q9NZI7 540 aa8.69□□□□□ -1.02
CHD1-206ENST00000511067 TM4SF5O14894 197 aa8.68□□□□□ -1.02
CHD1-206ENST00000511067 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
CHD1-206ENST00000511067 SEPT6Q14141 434 aa8.68□□□□□ -1.02
CHD1-206ENST00000511067 BNC2Q6ZN30 1099 aaPredicted RBP8.68□□□□□ -1.02
CHD1-206ENST00000511067 GRIN3AQ8TCU5 1115 aa8.68□□□□□ -1.02
CHD1-206ENST00000511067 NKD1Q969G9 470 aa8.68□□□□□ -1.02
CHD1-206ENST00000511067 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.68□□□□□ -1.023e-7■■■■■ 35.2
CHD1-206ENST00000511067 PPP1R1BQ9UD71 204 aaPredicted RBP8.68□□□□□ -1.02
CHD1-206ENST00000511067 IGHA1P01876 353 aa8.67□□□□□ -1.02
CHD1-206ENST00000511067 CRKP46108 304 aa8.67□□□□□ -1.02
CHD1-206ENST00000511067 CWF19L2Q2TBE0 894 aaKnown RBP8.67□□□□□ -1.02
CHD1-206ENST00000511067 DMRTC2Q8IXT2 367 aaPredicted RBP8.67□□□□□ -1.02
CHD1-206ENST00000511067 KLHDC7BQ96G42 594 aa8.67□□□□□ -1.02
CHD1-206ENST00000511067 DCAF5Q96JK2 942 aa8.67□□□□□ -1.02
CHD1-206ENST00000511067 CARD10Q9BWT7 1032 aa8.67□□□□□ -1.02
CHD1-206ENST00000511067 EFR3BQ9Y2G0 817 aa8.67□□□□□ -1.02
CHD1-206ENST00000511067 BPNT1O95861 308 aa8.66□□□□□ -1.02
CHD1-206ENST00000511067 MAP1SQ66K74 1059 aaPredicted RBP8.66□□□□□ -1.02
CHD1-206ENST00000511067 KCNB2Q92953 911 aa8.66□□□□□ -1.02
CHD1-206ENST00000511067 GINM1Q9NU53 330 aa8.66□□□□□ -1.02
CHD1-206ENST00000511067 PIK3R2O00459 728 aa8.65□□□□□ -1.02
CHD1-206ENST00000511067 MAOBP27338 520 aa8.65□□□□□ -1.02
CHD1-206ENST00000511067 CD68P34810 354 aaPredicted RBP8.65□□□□□ -1.02
CHD1-206ENST00000511067 GTF2F1P35269 517 aaKnown RBP eCLIP8.65□□□□□ -1.02
CHD1-206ENST00000511067 NASPP49321 788 aaPredicted RBP8.65□□□□□ -1.02
CHD1-206ENST00000511067 RPL6Q02878 288 aaKnown RBP8.65□□□□□ -1.02
CHD1-206ENST00000511067 REC114Q7Z4M0 266 aa8.65□□□□□ -1.02
CHD1-206ENST00000511067 GALNT11Q8NCW6 608 aa8.65□□□□□ -1.02
CHD1-206ENST00000511067 JARID2Q92833 1246 aaPredicted RBP8.65□□□□□ -1.02
CHD1-206ENST00000511067 HIRIP3Q9BW71 556 aaPredicted RBP8.65□□□□□ -1.02
CHD1-206ENST00000511067 DEAF1O75398 565 aaPredicted RBP8.64□□□□□ -1.03
CHD1-206ENST00000511067 RAC1P63000 192 aa8.64□□□□□ -1.03
CHD1-206ENST00000511067 SEZ6Q53EL9 994 aa8.64□□□□□ -1.03
CHD1-206ENST00000511067 SOGA3Q5TF21 947 aa8.64□□□□□ -1.03
CHD1-206ENST00000511067 REXO1Q8N1G1 1221 aaKnown RBP8.64□□□□□ -1.03
CHD1-206ENST00000511067 GPBAR1Q8TDU6 330 aa8.64□□□□□ -1.03
CHD1-206ENST00000511067 USP26Q9BXU7 913 aa8.64□□□□□ -1.03
CHD1-206ENST00000511067 CCDC86Q9H6F5 360 aaKnown RBP8.64□□□□□ -1.03
CHD1-206ENST00000511067 SYNGAP1Q96PV0 1343 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 LOC100289279A0A1B0GTE1 492 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 SPDYE3A6NKU9 549 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 STK10O94804 968 aaKnown RBP8.63□□□□□ -1.03
CHD1-206ENST00000511067 SSBP05455 408 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD1-206ENST00000511067 ZNF165P49910 485 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 NLRP12P59046 1061 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 PTPN11Q06124 597 aaPredicted RBP8.63□□□□□ -1.03
CHD1-206ENST00000511067 RBL2Q08999 1139 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 PLA2G4EQ3MJ16 856 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 TRAPPC3LQ5T215 181 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 FBXO11Q86XK2 927 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 FMR1NBQ8N0W7 255 aaPredicted RBP8.63□□□□□ -1.03
CHD1-206ENST00000511067 FBXO27Q8NI29 283 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 DHX38Q92620 1227 aaKnown RBP8.63□□□□□ -1.03
CHD1-206ENST00000511067 ACSBG1Q96GR2 724 aa8.63□□□□□ -1.03
CHD1-206ENST00000511067 A0A0A0MRY4 1105 aa8.62□□□□□ -1.03
CHD1-206ENST00000511067 GNB5O14775 395 aa8.62□□□□□ -1.03
CHD1-206ENST00000511067 TLR3O15455 904 aaKnown RBP8.62□□□□□ -1.03
CHD1-206ENST00000511067 ADAM11O75078 769 aa8.62□□□□□ -1.03
CHD1-206ENST00000511067 PDE3AQ14432 1141 aa8.62□□□□□ -1.03
CHD1-206ENST00000511067 KIF4BQ2VIQ3 1234 aa8.62□□□□□ -1.03
CHD1-206ENST00000511067 FOXD4L6Q3SYB3 417 aaPredicted RBP8.62□□□□□ -1.03
CHD1-206ENST00000511067 FOXD4L3Q6VB84 417 aaPredicted RBP8.62□□□□□ -1.03
CHD1-206ENST00000511067 TACC3Q9Y6A5 838 aa8.62□□□□□ -1.03
CHD1-206ENST00000511067 DLL1O00548 723 aa8.61□□□□□ -1.03
CHD1-206ENST00000511067 ECEL1O95672 775 aa8.61□□□□□ -1.03
CHD1-206ENST00000511067 CTSBP07858 339 aa8.61□□□□□ -1.03
CHD1-206ENST00000511067 IMPDH2P12268 514 aa8.61□□□□□ -1.03
CHD1-206ENST00000511067 MPRIPQ6WCQ1 1025 aa8.61□□□□□ -1.03
CHD1-206ENST00000511067 LINC00114Q6XXX2 140 aa8.61□□□□□ -1.03
CHD1-206ENST00000511067 TRIM11Q96F44 468 aa8.61□□□□□ -1.03
CHD1-206ENST00000511067 SRRTQ9BXP5 876 aaKnown RBP8.61□□□□□ -1.03
CHD1-206ENST00000511067 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
CHD1-206ENST00000511067 PCDHA4Q9UN74 947 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms