RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 FDX2Q6P4F2 183 aa11.48□□□□□ -0.57
TRAPPC11-206ENST00000509857 CYP8B1Q9UNU6 501 aa11.48□□□□□ -0.57
TRAPPC11-206ENST00000509857 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
TRAPPC11-206ENST00000509857 KIF4BQ2VIQ3 1234 aa11.47□□□□□ -0.57
TRAPPC11-206ENST00000509857 RASIP1Q5U651 963 aa11.47□□□□□ -0.57
TRAPPC11-206ENST00000509857 WDR18Q9BV38 432 aa11.47□□□□□ -0.57
TRAPPC11-206ENST00000509857 ZNF862O60290 1169 aa11.46□□□□□ -0.57
TRAPPC11-206ENST00000509857 PREPP48147 710 aa11.46□□□□□ -0.57
TRAPPC11-206ENST00000509857 RPS26P62854 115 aaKnown RBP11.46□□□□□ -0.57
TRAPPC11-206ENST00000509857 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAPPC11-206ENST00000509857 LRRC14Q15048 493 aa11.46□□□□□ -0.57
TRAPPC11-206ENST00000509857 AOC2O75106 756 aa11.45□□□□□ -0.58
TRAPPC11-206ENST00000509857 ADH5P11766 374 aa11.45□□□□□ -0.58
TRAPPC11-206ENST00000509857 RLBP1P12271 317 aa11.45□□□□□ -0.58
TRAPPC11-206ENST00000509857 TTBK2Q6IQ55 1244 aa11.45□□□□□ -0.58
TRAPPC11-206ENST00000509857 LLGL2Q6P1M3 1020 aa11.45□□□□□ -0.58
TRAPPC11-206ENST00000509857 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC11-206ENST00000509857 GRIN3AQ8TCU5 1115 aa11.45□□□□□ -0.58
TRAPPC11-206ENST00000509857 ZC3H12CQ9C0D7 883 aaKnown RBP11.45□□□□□ -0.58
TRAPPC11-206ENST00000509857 UNCXA6NJT0 531 aa11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 TRIM37O94972 964 aa11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 LIG3P49916 1009 aa11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 SOX4Q06945 474 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 DOC2BQ14184 412 aa11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 ARMC10Q8N2F6 343 aa11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 KCNB2Q92953 911 aa11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 TP53INP1Q96A56 240 aa11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 CBX8Q9HC52 389 aa11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 PCDHGC5Q9Y5F6 944 aa11.44□□□□□ -0.58
TRAPPC11-206ENST00000509857 LIG1P18858 919 aa11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 NKAPLQ5M9Q1 402 aa11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 MAP1SQ66K74 1059 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 AGMOQ6ZNB7 445 aa11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 C12orf50Q8NA57 414 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 C2CD4AQ8NCU7 369 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 WDR89Q96FK6 387 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 MYRFLQ96LU7 910 aa11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 GSX1Q9H4S2 264 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 RAD18Q9NS91 495 aa11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 HIF3AQ9Y2N7 669 aa11.43□□□□□ -0.58
TRAPPC11-206ENST00000509857 RECKO95980 971 aa11.42□□□□□ -0.58
TRAPPC11-206ENST00000509857 H2AFB1P0C5Y9 115 aa11.42□□□□□ -0.58
TRAPPC11-206ENST00000509857 H2AFB2P0C5Z0 115 aa11.42□□□□□ -0.58
TRAPPC11-206ENST00000509857 RSPO4Q2I0M5 234 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC11-206ENST00000509857 MRRFQ96E11 262 aaKnown RBP11.42□□□□□ -0.58
TRAPPC11-206ENST00000509857 BACH2Q9BYV9 841 aa11.42□□□□□ -0.58
TRAPPC11-206ENST00000509857 KIAA1522Q9P206 1035 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC11-206ENST00000509857 SART1O43290 800 aaKnown RBP11.41□□□□□ -0.58
TRAPPC11-206ENST00000509857 GPBAR1Q8TDU6 330 aa11.41□□□□□ -0.58
TRAPPC11-206ENST00000509857 UTP4Q969X6 686 aaKnown RBP11.41□□□□□ -0.58
TRAPPC11-206ENST00000509857 GAL3ST3Q96A11 431 aa11.41□□□□□ -0.58
TRAPPC11-206ENST00000509857 DRD2P14416 443 aa11.4□□□□□ -0.58
TRAPPC11-206ENST00000509857 AKAP4Q5JQC9 854 aa11.4□□□□□ -0.58
TRAPPC11-206ENST00000509857 MPRIPQ6WCQ1 1025 aa11.4□□□□□ -0.58
TRAPPC11-206ENST00000509857 ERMP1Q7Z2K6 904 aa11.4□□□□□ -0.58
TRAPPC11-206ENST00000509857 RSRP1Q9BUV0 290 aa11.4□□□□□ -0.58
TRAPPC11-206ENST00000509857 PPP1R9AQ9ULJ8 1098 aa11.4□□□□□ -0.58
TRAPPC11-206ENST00000509857 TMPRSS2O15393 492 aa11.39□□□□□ -0.59
TRAPPC11-206ENST00000509857 DHX15O43143 795 aaKnown RBP11.39□□□□□ -0.59
TRAPPC11-206ENST00000509857 SLFN14P0C7P3 912 aa11.39□□□□□ -0.59
TRAPPC11-206ENST00000509857 MAP3K11Q16584 847 aa11.39□□□□□ -0.59
TRAPPC11-206ENST00000509857 FAM20CQ8IXL6 584 aa11.39□□□□□ -0.59
TRAPPC11-206ENST00000509857 PHC3Q8NDX5 983 aa11.39□□□□□ -0.59
TRAPPC11-206ENST00000509857 CRIM1Q9NZV1 1036 aa11.39□□□□□ -0.59
TRAPPC11-206ENST00000509857 GAS2O43903 313 aaKnown RBP11.38□□□□□ -0.59
TRAPPC11-206ENST00000509857 ID3Q02535 119 aa11.38□□□□□ -0.59
TRAPPC11-206ENST00000509857 PRR23CQ6ZRP0 262 aa11.38□□□□□ -0.59
TRAPPC11-206ENST00000509857 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
TRAPPC11-206ENST00000509857 METTL5Q9NRN9 209 aaKnown RBP11.38□□□□□ -0.59
TRAPPC11-206ENST00000509857 ACTL7BQ9Y614 415 aa11.38□□□□□ -0.59
TRAPPC11-206ENST00000509857 TFE3P19532 575 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC11-206ENST00000509857 ZC3H12AQ5D1E8 599 aaKnown RBP11.37□□□□□ -0.59
TRAPPC11-206ENST00000509857 ACSBG1Q96GR2 724 aa11.37□□□□□ -0.59
TRAPPC11-206ENST00000509857 AP4E1Q9UPM8 1137 aa11.37□□□□□ -0.59
TRAPPC11-206ENST00000509857 BMP3P12645 472 aa11.36□□□□□ -0.59
TRAPPC11-206ENST00000509857 PWP1Q13610 501 aa11.36□□□□□ -0.59
TRAPPC11-206ENST00000509857 TSNAXIP1Q2TAA8 658 aa11.36□□□□□ -0.59
TRAPPC11-206ENST00000509857 DYRK3O43781 588 aa11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 ERVK-24P63145 666 aa11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 PTPN11Q06124 597 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 EZH1Q92800 747 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 RHOVQ96L33 236 aa11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 TMEM74Q96NL1 305 aa11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 ATXN3LQ9H3M9 355 aa11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 FAM105AQ9NUU6 356 aa11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 RAXQ9Y2V3 346 aa11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 PCDHB5Q9Y5E4 795 aa11.35□□□□□ -0.59
TRAPPC11-206ENST00000509857 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 FURINP09958 794 aa11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 MAP4P27816 1152 aaKnown RBP11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 FANCCQ00597 558 aa11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 SGO2Q562F6 1265 aa11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 HS2ST1Q7LGA3 356 aa11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 DYMQ7RTS9 669 aa11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 CCDC84Q86UT8 332 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 TRIM42Q8IWZ5 723 aa11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 FANCD2OSQ96PS1 177 aa11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 DISC1Q9NRI5 854 aa11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 TLR6Q9Y2C9 796 aa11.34□□□□□ -0.59
TRAPPC11-206ENST00000509857 LMNB2Q03252 620 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms