RNA–Protein interactions for RNA: ENST00000509805.5

SMN2-209, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-209ENST00000509805 ZNF576Q9H609 170 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 GNEQ9Y223 722 aaKnown RBP4.11□□□□□ -1.75
SMN2-209ENST00000509805 HIF3AQ9Y2N7 669 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 DAGLAQ9Y4D2 1042 aa4.11□□□□□ -1.75
SMN2-209ENST00000509805 PATL2C9JE40 543 aaKnown RBP4.1□□□□□ -1.75
SMN2-209ENST00000509805 DLGAP3O95886 979 aa4.1□□□□□ -1.75
SMN2-209ENST00000509805 SLFN14P0C7P3 912 aa4.1□□□□□ -1.75
SMN2-209ENST00000509805 ADH5P11766 374 aa4.1□□□□□ -1.75
SMN2-209ENST00000509805 FBLN7Q53RD9 439 aa4.1□□□□□ -1.75
SMN2-209ENST00000509805 NXPE4Q6UWF7 544 aa4.1□□□□□ -1.75
SMN2-209ENST00000509805 SMG8Q8ND04 991 aaKnown RBP4.1□□□□□ -1.75
SMN2-209ENST00000509805 BCO2Q9BYV7 579 aa4.1□□□□□ -1.75
SMN2-209ENST00000509805 LRRC4CQ9HCJ2 640 aa4.1□□□□□ -1.75
SMN2-209ENST00000509805 LEMD3Q9Y2U8 911 aa4.1□□□□□ -1.75
SMN2-209ENST00000509805 ECEL1O95672 775 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 B3GALT4O96024 378 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 NFICP08651 508 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 LIG1P18858 919 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 LMNB1P20700 586 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 MAP7Q14244 749 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 DUSP27Q5VZP5 1158 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 CDPF1Q6NVV7 123 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 TPTE2Q6XPS3 522 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 ARHGAP27Q6ZUM4 889 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 ALKBH8Q96BT7 664 aaKnown RBP4.09□□□□□ -1.75
SMN2-209ENST00000509805 ABCB6Q9NP58 842 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 TMEM39AQ9NV64 488 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 ANGEL1Q9UNK9 670 aaKnown RBP4.09□□□□□ -1.75
SMN2-209ENST00000509805 ACTL7BQ9Y614 415 aa4.09□□□□□ -1.75
SMN2-209ENST00000509805 TM4SF5O14894 197 aa4.08□□□□□ -1.76
SMN2-209ENST00000509805 AOC2O75106 756 aa4.08□□□□□ -1.76
SMN2-209ENST00000509805 ITPKAP23677 461 aa4.08□□□□□ -1.76
SMN2-209ENST00000509805 MAP1SQ66K74 1059 aaPredicted RBP4.08□□□□□ -1.76
SMN2-209ENST00000509805 INTS5Q6P9B9 1019 aaKnown RBP4.08□□□□□ -1.76
SMN2-209ENST00000509805 C2CD4AQ8NCU7 369 aaPredicted RBP4.08□□□□□ -1.76
SMN2-209ENST00000509805 SUGCTQ9HAC7 445 aa4.08□□□□□ -1.76
SMN2-209ENST00000509805 SPG7Q9UQ90 795 aa4.08□□□□□ -1.76
SMN2-209ENST00000509805 SAMM50Q9Y512 469 aa4.08□□□□□ -1.76
SMN2-209ENST00000509805 CYP26A1O43174 497 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 TREHO43280 583 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 FBXO24O75426 580 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 TIAF1O95411 115 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 CTSBP07858 339 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 GSTP1P09211 210 aaKnown RBP4.07□□□□□ -1.76
SMN2-209ENST00000509805 XRCC5P13010 732 aaKnown RBP4.07□□□□□ -1.76
SMN2-209ENST00000509805 GSTT1P30711 240 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 PTPN12Q05209 780 aaKnown RBP4.07□□□□□ -1.76
SMN2-209ENST00000509805 KRTAP1-1Q07627 177 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 ENOX2Q16206 610 aaKnown RBP4.07□□□□□ -1.76
SMN2-209ENST00000509805 RPS26P11Q5JNZ5 115 aaPredicted RBP4.07□□□□□ -1.76
SMN2-209ENST00000509805 ALG1LQ6GMV1 187 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 PRPF40BQ6NWY9 871 aaKnown RBP4.07□□□□□ -1.76
SMN2-209ENST00000509805 ZDHHC13Q8IUH4 622 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 SULF2Q8IWU5 870 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 TRIM56Q9BRZ2 755 aaKnown RBP4.07□□□□□ -1.76
SMN2-209ENST00000509805 FAM105AQ9NUU6 356 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 PIM2Q9P1W9 311 aa4.07□□□□□ -1.76
SMN2-209ENST00000509805 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.06□□□□□ -1.76
SMN2-209ENST00000509805 LDHBP07195 334 aaKnown RBP4.06□□□□□ -1.76
SMN2-209ENST00000509805 ID3Q02535 119 aa4.06□□□□□ -1.76
SMN2-209ENST00000509805 FAAP100Q0VG06 881 aa4.06□□□□□ -1.76
SMN2-209ENST00000509805 SETDB2Q96T68 719 aa4.06□□□□□ -1.76
SMN2-209ENST00000509805 METTL22Q9BUU2 404 aaPredicted RBP4.06□□□□□ -1.76
SMN2-209ENST00000509805 WDR18Q9BV38 432 aa4.06□□□□□ -1.76
SMN2-209ENST00000509805 EMILIN2Q9BXX0 1053 aa4.06□□□□□ -1.76
SMN2-209ENST00000509805 ATXN3LQ9H3M9 355 aa4.06□□□□□ -1.76
SMN2-209ENST00000509805 CCDC86Q9H6F5 360 aaKnown RBP4.06□□□□□ -1.76
SMN2-209ENST00000509805 WWC3Q9ULE0 1092 aa4.06□□□□□ -1.76
SMN2-209ENST00000509805 CSADQ9Y600 493 aa4.06□□□□□ -1.76
SMN2-209ENST00000509805 FAM170BA6NMN3 283 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 WNT11O96014 354 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 F13BP05160 661 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 HCLS1P14317 486 aaPredicted RBP4.05□□□□□ -1.76
SMN2-209ENST00000509805 CYP27A1Q02318 531 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 TP53INP2Q8IXH6 220 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 SMYD4Q8IYR2 804 aaPredicted RBP4.05□□□□□ -1.76
SMN2-209ENST00000509805 WDR89Q96FK6 387 aaPredicted RBP4.05□□□□□ -1.76
SMN2-209ENST00000509805 ASB16Q96NS5 453 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 TRAIPQ9BWF2 469 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 CEP44Q9C0F1 390 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 SEMA6CQ9H3T2 930 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 PRKAG2Q9UGJ0 569 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 PPP1R9AQ9ULJ8 1098 aa4.05□□□□□ -1.76
SMN2-209ENST00000509805 TTF2Q9UNY4 1162 aaKnown RBP4.05□□□□□ -1.76
SMN2-209ENST00000509805 MED26O95402 600 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 C8AP07357 584 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 ARNTP27540 789 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 HOXA10P31260 410 aaPredicted RBP4.04□□□□□ -1.76
SMN2-209ENST00000509805 CD97P48960 835 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 GP2P55259 537 aaKnown RBP4.04□□□□□ -1.76
SMN2-209ENST00000509805 CDK5R2Q13319 367 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 DSC3Q14574 896 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 TTLL4Q14679 1199 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 CYP27C1Q4G0S4 372 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 ZNF765Q7L2R6 523 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 CDC37L1Q7L3B6 337 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 ZAR1Q86SH2 424 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMN2-209ENST00000509805 GLIS3Q8NEA6 775 aa4.04□□□□□ -1.76
SMN2-209ENST00000509805 FBF1Q8TES7 1133 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms