RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 WDR90Q96KV7 1748 aa17.88■□□□□ 0.45
RNF4-213ENST00000509388 CLRN2A0PK11 232 aa17.87■□□□□ 0.45
RNF4-213ENST00000509388 ZC3H15Q8WU90 426 aaKnown RBP17.87■□□□□ 0.45
RNF4-213ENST00000509388 APPBP2Q92624 585 aa17.87■□□□□ 0.45
RNF4-213ENST00000509388 AIDAQ96BJ3 306 aa17.87■□□□□ 0.45
RNF4-213ENST00000509388 VEZTQ9HBM0 779 aa17.87■□□□□ 0.45
RNF4-213ENST00000509388 TCRBV5S4A2TA0A5A2 114 aa17.86■□□□□ 0.45
RNF4-213ENST00000509388 PPP4CP60510 307 aa17.86■□□□□ 0.45
RNF4-213ENST00000509388 SLFNL1Q499Z3 407 aa17.86■□□□□ 0.45
RNF4-213ENST00000509388 ANGEL2Q5VTE6 544 aaKnown RBP17.86■□□□□ 0.45
RNF4-213ENST00000509388 CDC42EP5Q6NZY7 148 aa17.86■□□□□ 0.45
RNF4-213ENST00000509388 ADGRA1Q86SQ6 560 aa17.86■□□□□ 0.45
RNF4-213ENST00000509388 ZBED3Q96IU2 234 aaPredicted RBP17.86■□□□□ 0.45
RNF4-213ENST00000509388 ZNF70Q9UC06 446 aaPredicted RBP17.86■□□□□ 0.45
RNF4-213ENST00000509388 RFX7Q2KHR2 1363 aa17.86■□□□□ 0.45
RNF4-213ENST00000509388 CHGBP05060 677 aa17.85■□□□□ 0.45
RNF4-213ENST00000509388 TNNI2P48788 182 aa17.85■□□□□ 0.45
RNF4-213ENST00000509388 CASC1Q6TDU7 716 aa17.85■□□□□ 0.45
RNF4-213ENST00000509388 LDHDQ86WU2 507 aa17.85■□□□□ 0.45
RNF4-213ENST00000509388 TEX11Q8IYF3 940 aa17.85■□□□□ 0.45
RNF4-213ENST00000509388 GGA3Q9NZ52 723 aa17.85■□□□□ 0.45
RNF4-213ENST00000509388 MBD4O95243 580 aa17.84■□□□□ 0.45
RNF4-213ENST00000509388 DYNLL1P63167 89 aaKnown RBP17.84■□□□□ 0.45
RNF4-213ENST00000509388 TNFAIP1Q13829 316 aa17.84■□□□□ 0.45
RNF4-213ENST00000509388 SPDYE2Q495Y8 402 aa17.84■□□□□ 0.45
RNF4-213ENST00000509388 ZMYM1Q5SVZ6 1142 aa17.84■□□□□ 0.45
RNF4-213ENST00000509388 CWC27Q6UX04 472 aaKnown RBP17.84■□□□□ 0.45
RNF4-213ENST00000509388 APOBEC3FQ8IUX4 373 aaKnown RBP17.84■□□□□ 0.45
RNF4-213ENST00000509388 SULF1Q8IWU6 871 aa17.84■□□□□ 0.45
RNF4-213ENST00000509388 RUFY2Q8WXA3 655 aa17.84■□□□□ 0.45
RNF4-213ENST00000509388 PUS7LQ9H0K6 701 aaKnown RBP17.84■□□□□ 0.45
RNF4-213ENST00000509388 HELLSQ9NRZ9 838 aa17.84■□□□□ 0.45
RNF4-213ENST00000509388 SCN4AP35499 1836 aa17.84■□□□□ 0.45
RNF4-213ENST00000509388 USP5P45974 858 aa17.83■□□□□ 0.44
RNF4-213ENST00000509388 NMIQ13287 307 aaPredicted RBP17.83■□□□□ 0.44
RNF4-213ENST00000509388 MCMDC2Q4G0Z9 681 aa17.83■□□□□ 0.44
RNF4-213ENST00000509388 SH3RF3Q8TEJ3 882 aaPredicted RBP17.83■□□□□ 0.44
RNF4-213ENST00000509388 OSBP2Q969R2 916 aa17.83■□□□□ 0.44
RNF4-213ENST00000509388 CRNKL1Q9BZJ0 848 aaKnown RBP17.83■□□□□ 0.44
RNF4-213ENST00000509388 ARMT1Q9H993 441 aa17.83■□□□□ 0.44
RNF4-213ENST00000509388 ZNF646O15015 1829 aaPredicted RBP17.83■□□□□ 0.44
RNF4-213ENST00000509388 ASTN2O75129 1339 aaPredicted RBP17.82■□□□□ 0.44
RNF4-213ENST00000509388 PITPNM2Q9BZ72 1349 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 TCP10L2B9ZVM9 353 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 KIF3CO14782 793 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 POTEIP0CG38 1075 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 POTEJP0CG39 1038 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 CACNB3P54284 484 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 MFAP1P55081 439 aaKnown RBP17.82■□□□□ 0.44
RNF4-213ENST00000509388 PICALMQ13492 652 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 CHADLQ6NUI6 762 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 CDC37L1Q7L3B6 337 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 LCORLQ8N3X6 602 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 DDRGK1Q96HY6 314 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 RIOK1Q9BRS2 568 aaKnown RBP17.82■□□□□ 0.44
RNF4-213ENST00000509388 PGAP2Q9UHJ9 254 aa17.82■□□□□ 0.44
RNF4-213ENST00000509388 GPAA1O43292 621 aa17.81■□□□□ 0.44
RNF4-213ENST00000509388 CDC45O75419 566 aa17.81■□□□□ 0.44
RNF4-213ENST00000509388 GNAT2P19087 354 aa17.81■□□□□ 0.44
RNF4-213ENST00000509388 CHMLP26374 656 aa17.81■□□□□ 0.44
RNF4-213ENST00000509388 RHBDL3P58872 404 aa17.81■□□□□ 0.44
RNF4-213ENST00000509388 FKBP1CQ5VVH2 108 aa17.81■□□□□ 0.44
RNF4-213ENST00000509388 MAP1SQ66K74 1059 aaPredicted RBP17.81■□□□□ 0.44
RNF4-213ENST00000509388 KRT26Q7Z3Y9 468 aa17.81■□□□□ 0.44
RNF4-213ENST00000509388 TGFBRAP1Q8WUH2 860 aa17.81■□□□□ 0.44
RNF4-213ENST00000509388 SEC62Q99442 399 aaKnown RBP17.81■□□□□ 0.44
RNF4-213ENST00000509388 SLC4A4Q9Y6R1 1079 aa17.81■□□□□ 0.44
RNF4-213ENST00000509388 A0A0D9SFI3 127 aa17.8■□□□□ 0.44
RNF4-213ENST00000509388 M0R2C6 588 aa17.8■□□□□ 0.44
RNF4-213ENST00000509388 TOMM70O94826 608 aa17.8■□□□□ 0.44
RNF4-213ENST00000509388 APPP05067 770 aa17.8■□□□□ 0.44
RNF4-213ENST00000509388 USP48Q86UV5 1035 aa17.8■□□□□ 0.44
RNF4-213ENST00000509388 STRBPQ96SI9 672 aaKnown RBP17.8■□□□□ 0.44
RNF4-213ENST00000509388 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
RNF4-213ENST00000509388 WDHD1O75717 1129 aaPredicted RBP17.79■□□□□ 0.44
RNF4-213ENST00000509388 TCP10Q12799 353 aa17.79■□□□□ 0.44
RNF4-213ENST00000509388 NFIAQ12857 509 aa17.79■□□□□ 0.44
RNF4-213ENST00000509388 RASA3Q14644 834 aa17.79■□□□□ 0.44
RNF4-213ENST00000509388 FAM83AQ86UY5 434 aa17.79■□□□□ 0.44
RNF4-213ENST00000509388 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
RNF4-213ENST00000509388 ZSCAN29Q8IWY8 852 aaPredicted RBP17.79■□□□□ 0.44
RNF4-213ENST00000509388 SMC1BQ8NDV3 1235 aa17.79■□□□□ 0.44
RNF4-213ENST00000509388 DEFB129Q9H1M3 183 aa17.79■□□□□ 0.44
RNF4-213ENST00000509388 SCAF8Q9UPN6 1271 aaKnown RBP17.79■□□□□ 0.44
RNF4-213ENST00000509388 MAST2Q6P0Q8 1798 aa17.79■□□□□ 0.44
RNF4-213ENST00000509388 DOCK2Q92608 1830 aa17.78■□□□□ 0.44
RNF4-213ENST00000509388 ENTPD3O75355 529 aa17.78■□□□□ 0.44
RNF4-213ENST00000509388 CCDC129Q6ZRS4 1044 aa17.78■□□□□ 0.44
RNF4-213ENST00000509388 FAM151AQ8WW52 585 aa17.78■□□□□ 0.44
RNF4-213ENST00000509388 NACAP1Q9BZK3 213 aa17.78■□□□□ 0.44
RNF4-213ENST00000509388 PPP2R3BQ9Y5P8 575 aa17.78■□□□□ 0.44
RNF4-213ENST00000509388 MYH2Q9UKX2 1941 aa17.77■□□□□ 0.44
RNF4-213ENST00000509388 PATL2C9JE40 543 aaKnown RBP17.77■□□□□ 0.44
RNF4-213ENST00000509388 ADM5C9JUS6 153 aa17.77■□□□□ 0.44
RNF4-213ENST00000509388 PRKAB2O43741 272 aa17.77■□□□□ 0.44
RNF4-213ENST00000509388 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
RNF4-213ENST00000509388 KIAA1211Q6ZU35 1233 aa17.77■□□□□ 0.44
RNF4-213ENST00000509388 AMOTL1Q8IY63 956 aa17.77■□□□□ 0.44
RNF4-213ENST00000509388 RBM46Q8TBY0 533 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms