RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 NBPF12Q5TAG4 269 aaPredicted RBP5.05□□□□□ -1.6
RNF4-211ENST00000509206 STRIP1Q5VSL9 837 aa5.05□□□□□ -1.6
RNF4-211ENST00000509206 FAM89AQ96GI7 184 aa5.05□□□□□ -1.6
RNF4-211ENST00000509206 PHACTR3Q96KR7 559 aa5.05□□□□□ -1.6
RNF4-211ENST00000509206 SNX27Q96L92 541 aa5.05□□□□□ -1.6
RNF4-211ENST00000509206 C1QTNF1Q9BXJ1 281 aa5.05□□□□□ -1.6
RNF4-211ENST00000509206 NBPF3Q9H094 633 aa5.05□□□□□ -1.6
RNF4-211ENST00000509206 SEMA6BQ9H3T3 888 aa5.05□□□□□ -1.6
RNF4-211ENST00000509206 PLSCR2Q9NRY7 297 aa5.05□□□□□ -1.6
RNF4-211ENST00000509206 NUDCQ9Y266 331 aa5.05□□□□□ -1.6
RNF4-211ENST00000509206 XDHP47989 1333 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 FAM205AQ6ZU69 1335 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 CLRN2A0PK11 232 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 IRS4O14654 1257 aaPredicted RBP5.04□□□□□ -1.6
RNF4-211ENST00000509206 HTATSF1O43719 755 aaKnown RBP5.04□□□□□ -1.6
RNF4-211ENST00000509206 INHAP05111 366 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 PRKCZQ05513 592 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 PTGDRQ13258 359 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 SNAPC2Q13487 334 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 TNFAIP1Q13829 316 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 AMHR2Q16671 573 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 DACT2Q5SW24 774 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 COPS6Q7L5N1 327 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 ANKRD18AQ8IVF6 992 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 CDAN1Q8IWY9 1227 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 MYLIPQ8WY64 445 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 CFAP53Q96M91 514 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 C11orf49Q9H6J7 331 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 ZCCHC17Q9NP64 241 aaKnown RBP5.04□□□□□ -1.6
RNF4-211ENST00000509206 PRKAG2Q9UGJ0 569 aa5.04□□□□□ -1.6
RNF4-211ENST00000509206 TTC28Q96AY4 2481 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 LAMA3Q16787 3333 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 NUP98P52948 1817 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 BTBD19C9JJ37 291 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 F8W031 263 aaPredicted RBP5.03□□□□□ -1.6
RNF4-211ENST00000509206 U2AF1L5P0DN76 240 aaPredicted RBP5.03□□□□□ -1.6
RNF4-211ENST00000509206 ELNP15502 786 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 EIF4A1P60842 406 aaKnown RBP5.03□□□□□ -1.6
RNF4-211ENST00000509206 GTF2IP78347 998 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 U2AF1Q01081 240 aaKnown RBP eCLIP5.03□□□□□ -1.6
RNF4-211ENST00000509206 RASA3Q14644 834 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 CCDC152Q4G0S7 254 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 CC2D1BQ5T0F9 858 aaKnown RBP5.03□□□□□ -1.6
RNF4-211ENST00000509206 C17orf99Q6UX52 265 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 ALYREFQ86V81 257 aaKnown RBP5.03□□□□□ -1.6
RNF4-211ENST00000509206 ANKLE1Q8NAG6 615 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 DIS3LQ8TF46 1054 aaKnown RBP5.03□□□□□ -1.6
RNF4-211ENST00000509206 XAGE3Q8WTP9 111 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 PPM1EQ8WY54 764 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 CCDC85AQ96PX6 553 aaPredicted RBP5.03□□□□□ -1.6
RNF4-211ENST00000509206 FAM117AQ9C073 453 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 COA1Q9GZY4 146 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 LHX6Q9UPM6 363 aa5.03□□□□□ -1.6
RNF4-211ENST00000509206 ZNF804BA4D1E1 1349 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 COL1A1P02452 1464 aaPredicted RBP5.02□□□□□ -1.61
RNF4-211ENST00000509206 ATP5J2-PTCD1G3V325 749 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 PDHXO00330 501 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 TNPO2O14787 897 aaKnown RBP5.02□□□□□ -1.61
RNF4-211ENST00000509206 MAP3K7O43318 606 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 ANXA1P04083 346 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 KCNJ4P48050 445 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 TNNI2P48788 182 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 FLT3LGP49771 235 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 VGLL4Q14135 290 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 CFAP100Q494V2 611 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 ERO1BQ86YB8 467 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 PARP9Q8IXQ6 854 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 MTMR14Q8NCE2 650 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 ADAMTS19Q8TE59 1207 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 PXYLP1Q8TE99 480 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 COA7Q96BR5 231 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 DDRGK1Q96HY6 314 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 UHRF1Q96T88 793 aaPredicted RBP5.02□□□□□ -1.61
RNF4-211ENST00000509206 EPAS1Q99814 870 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 SEC31BQ9NQW1 1179 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 VCANP13611 3396 aa5.02□□□□□ -1.61
RNF4-211ENST00000509206 KDM3BQ7LBC6 1761 aa5.01□□□□□ -1.61
RNF4-211ENST00000509206 TAF1P21675 1872 aa5.01□□□□□ -1.61
RNF4-211ENST00000509206 DUOX1Q9NRD9 1551 aa5.01□□□□□ -1.61
RNF4-211ENST00000509206 CTGFP29279 349 aa5.01□□□□□ -1.61
RNF4-211ENST00000509206 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.01□□□□□ -1.61
RNF4-211ENST00000509206 ANKRD23Q86SG2 305 aa5.01□□□□□ -1.61
RNF4-211ENST00000509206 ATXN2LQ8WWM7 1075 aaKnown RBP5.01□□□□□ -1.61
RNF4-211ENST00000509206 HOOK2Q96ED9 719 aa5.01□□□□□ -1.61
RNF4-211ENST00000509206 ZBED3Q96IU2 234 aaPredicted RBP5.01□□□□□ -1.61
RNF4-211ENST00000509206 CDC5LQ99459 802 aaKnown RBP5.01□□□□□ -1.61
RNF4-211ENST00000509206 PARK7Q99497 189 aaKnown RBP5.01□□□□□ -1.61
RNF4-211ENST00000509206 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.01□□□□□ -1.61
RNF4-211ENST00000509206 CDHR5Q9HBB8 845 aa5.01□□□□□ -1.61
RNF4-211ENST00000509206 HMX1Q9NP08 348 aaPredicted RBP5.01□□□□□ -1.61
RNF4-211ENST00000509206 GABRQQ9UN88 632 aa5.01□□□□□ -1.61
RNF4-211ENST00000509206 ADGRA2Q96PE1 1338 aa5□□□□□ -1.61
RNF4-211ENST00000509206 SYNGAP1Q96PV0 1343 aa5□□□□□ -1.61
RNF4-211ENST00000509206 POTEB3A0JP26 581 aa5□□□□□ -1.61
RNF4-211ENST00000509206 SPDYE5A6NIY4 337 aa5□□□□□ -1.61
RNF4-211ENST00000509206 TCP10L2B9ZVM9 353 aa5□□□□□ -1.61
RNF4-211ENST00000509206 CCT4P50991 539 aaKnown RBP5□□□□□ -1.61
RNF4-211ENST00000509206 MRPS5P82675 430 aaKnown RBP5□□□□□ -1.61
RNF4-211ENST00000509206 PPIL2Q13356 520 aa5□□□□□ -1.61
RNF4-211ENST00000509206 PROSER3Q2NL68 480 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms