RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.13□□□□□ -1.27
AFP-204ENST00000508838 APOBEC3FQ8IUX4 373 aaKnown RBP7.13□□□□□ -1.27
AFP-204ENST00000508838 ANKRD18AQ8IVF6 992 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 PLA2G12BQ9BX93 195 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 COA1Q9GZY4 146 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 DEFB129Q9H1M3 183 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 IFT57Q9NWB7 429 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 STK17AQ9UEE5 414 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 HDAC9Q9UKV0 1011 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 JAG2Q9Y219 1238 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 LAS1LQ9Y4W2 734 aaKnown RBP7.13□□□□□ -1.27
AFP-204ENST00000508838 PTCH2Q9Y6C5 1203 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 PARP14Q460N5 1801 aa7.13□□□□□ -1.27
AFP-204ENST00000508838 PI4KAP2A4QPH2 592 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 H7C1W4 665 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 ELL2O00472 640 aaPredicted RBP7.12□□□□□ -1.27
AFP-204ENST00000508838 USP2O75604 605 aaPredicted RBP7.12□□□□□ -1.27
AFP-204ENST00000508838 CSF1RP07333 972 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 GTF2IP78347 998 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 CHRNDQ07001 517 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 C15orf52Q6ZUT6 534 aaKnown RBP7.12□□□□□ -1.27
AFP-204ENST00000508838 UBE3BQ7Z3V4 1068 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 RIC3Q7Z5B4 369 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 FAM43AQ8N2R8 423 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 PI4KAP1Q8N8J0 262 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 TSR2Q969E8 191 aaKnown RBP7.12□□□□□ -1.27
AFP-204ENST00000508838 RNF25Q96BH1 459 aaPredicted RBP7.12□□□□□ -1.27
AFP-204ENST00000508838 PRMT6Q96LA8 375 aaPredicted RBP7.12□□□□□ -1.27
AFP-204ENST00000508838 CD209Q9NNX6 404 aa7.12□□□□□ -1.27
AFP-204ENST00000508838 COL2A1P02458 1487 aaPredicted RBP7.11□□□□□ -1.27
AFP-204ENST00000508838 MANSC4A6NHS7 340 aaPredicted RBP7.11□□□□□ -1.27
AFP-204ENST00000508838 IL1R1P14778 569 aa7.11□□□□□ -1.27
AFP-204ENST00000508838 ITGA6P23229 1130 aa7.11□□□□□ -1.27
AFP-204ENST00000508838 FOXO4P98177 505 aa7.11□□□□□ -1.27
AFP-204ENST00000508838 MOGSQ13724 837 aa7.11□□□□□ -1.27
AFP-204ENST00000508838 VGLL4Q14135 290 aa7.11□□□□□ -1.27
AFP-204ENST00000508838 CCDC184Q52MB2 194 aa7.11□□□□□ -1.27
AFP-204ENST00000508838 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.11□□□□□ -1.277e-50■□□□□ 9.8
AFP-204ENST00000508838 CDC5LQ99459 802 aaKnown RBP7.11□□□□□ -1.27
AFP-204ENST00000508838 SNCAIPQ9Y6H5 919 aa7.11□□□□□ -1.27
AFP-204ENST00000508838 A0A0G2JMZ2 1700 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 RPAP1Q9BWH6 1393 aaPredicted RBP7.1□□□□□ -1.27
AFP-204ENST00000508838 FAM205AQ6ZU69 1335 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 H0YGN5 161 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 SOX1O00570 391 aaPredicted RBP7.1□□□□□ -1.27
AFP-204ENST00000508838 APAF1O14727 1248 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 TAF5LO75529 589 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 NEFMP07197 916 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 TTLL12Q14166 644 aaPredicted RBP7.1□□□□□ -1.27
AFP-204ENST00000508838 GCKRQ14397 625 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 RALBP1Q15311 655 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 CFAP100Q494V2 611 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 KSR2Q6VAB6 950 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 THSD4Q6ZMP0 1018 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 HELBQ8NG08 1087 aaPredicted RBP7.1□□□□□ -1.27
AFP-204ENST00000508838 FBXW7Q969H0 707 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 KAZALD1Q96I82 304 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 LEMD3Q9Y2U8 911 aa7.1□□□□□ -1.27
AFP-204ENST00000508838 RLFQ13129 1914 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 CHD9Q3L8U1 2897 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 PSEN2P49810 448 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 RASA3Q14644 834 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 MTFR1Q15390 333 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 TTLL5Q6EMB2 1281 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 ARMC9Q7Z3E5 817 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 SH3TC2Q8TF17 1288 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 GCC1Q96CN9 775 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 OPTNQ96CV9 577 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 TMEM39BQ9GZU3 492 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 ELP3Q9H9T3 547 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 PPP2R3BQ9Y5P8 575 aa7.09□□□□□ -1.27
AFP-204ENST00000508838 FANCIQ9NVI1 1328 aa7.08□□□□□ -1.28
AFP-204ENST00000508838 F8W031 263 aaPredicted RBP7.08□□□□□ -1.28
AFP-204ENST00000508838 GTPBP6O43824 516 aaPredicted RBP7.08□□□□□ -1.28
AFP-204ENST00000508838 ALDH1A1P00352 501 aa7.08□□□□□ -1.28
AFP-204ENST00000508838 FKBP1AP62942 108 aaKnown RBP7.08□□□□□ -1.28
AFP-204ENST00000508838 SP3Q02447 781 aa7.08□□□□□ -1.28
AFP-204ENST00000508838 TREML4Q6UXN2 200 aa7.08□□□□□ -1.28
AFP-204ENST00000508838 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.08□□□□□ -1.282e-6■■■■□ 23.4
AFP-204ENST00000508838 ERO1AQ96HE7 468 aa7.08□□□□□ -1.28
AFP-204ENST00000508838 ZNF594Q96JF6 807 aaPredicted RBP7.08□□□□□ -1.28
AFP-204ENST00000508838 PNNQ9H307 717 aaKnown RBP7.08□□□□□ -1.28
AFP-204ENST00000508838 EFCC1Q9HA90 598 aa7.08□□□□□ -1.28
AFP-204ENST00000508838 CHD7Q9P2D1 2997 aa7.08□□□□□ -1.28
AFP-204ENST00000508838 RBM27Q9P2N5 1060 aaKnown RBP7.08□□□□□ -1.28
AFP-204ENST00000508838 SPDYE5A6NIY4 337 aa7.07□□□□□ -1.28
AFP-204ENST00000508838 NF2P35240 595 aa7.07□□□□□ -1.28
AFP-204ENST00000508838 CACNB3P54284 484 aa7.07□□□□□ -1.28
AFP-204ENST00000508838 GNAI1P63096 354 aa7.07□□□□□ -1.28
AFP-204ENST00000508838 FLIIQ13045 1269 aa7.07□□□□□ -1.28
AFP-204ENST00000508838 SUZ12Q15022 739 aaKnown RBP7.07□□□□□ -1.28
AFP-204ENST00000508838 DLGAP5Q15398 846 aa7.07□□□□□ -1.28
AFP-204ENST00000508838 INTS3Q68E01 1043 aaKnown RBP7.07□□□□□ -1.28
AFP-204ENST00000508838 OGFOD1Q8N543 542 aa7.07□□□□□ -1.28
AFP-204ENST00000508838 VGLL2Q8N8G2 317 aa7.07□□□□□ -1.28
AFP-204ENST00000508838 TDRD7Q8NHU6 1098 aaKnown RBP7.07□□□□□ -1.28
AFP-204ENST00000508838 PRKRIP1Q9H875 184 aaPredicted RBP7.07□□□□□ -1.28
AFP-204ENST00000508838 VEZTQ9HBM0 779 aa7.07□□□□□ -1.28
AFP-204ENST00000508838 ZNF70Q9UC06 446 aaPredicted RBP7.07□□□□□ -1.28
AFP-204ENST00000508838 NCOR1O75376 2440 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms