RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 GTF2A2P52657 109 aa13.16□□□□□ -0.3
SIL1-210ENST00000508639 PRPF38BQ5VTL8 546 aaKnown RBP13.16□□□□□ -0.3
SIL1-210ENST00000508639 SH3BP5LQ7L8J4 393 aa13.16□□□□□ -0.3
SIL1-210ENST00000508639 MEIS3Q99687 375 aa13.16□□□□□ -0.3
SIL1-210ENST00000508639 EFCC1Q9HA90 598 aa13.16□□□□□ -0.3
SIL1-210ENST00000508639 LRRFIP2Q9Y608 721 aaKnown RBP13.16□□□□□ -0.3
SIL1-210ENST00000508639 ATRNL1Q5VV63 1379 aa13.16□□□□□ -0.3
SIL1-210ENST00000508639 MYH2Q9UKX2 1941 aa13.15□□□□□ -0.3
SIL1-210ENST00000508639 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
SIL1-210ENST00000508639 TNNI2P48788 182 aa13.15□□□□□ -0.3
SIL1-210ENST00000508639 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
SIL1-210ENST00000508639 TAF1CQ15572 869 aaPredicted RBP13.15□□□□□ -0.3
SIL1-210ENST00000508639 ERO1BQ86YB8 467 aa13.15□□□□□ -0.3
SIL1-210ENST00000508639 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
SIL1-210ENST00000508639 ERO1AQ96HE7 468 aa13.15□□□□□ -0.3
SIL1-210ENST00000508639 WRNIP1Q96S55 665 aa13.15□□□□□ -0.3
SIL1-210ENST00000508639 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
SIL1-210ENST00000508639 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
SIL1-210ENST00000508639 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
SIL1-210ENST00000508639 ADGRA2Q96PE1 1338 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 PHF20L1A8MW92 1017 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 ZBTB22O15209 634 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 CIAO1O76071 339 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 SLC5A1P13866 664 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 TIMM10P62072 90 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 TCP10Q12799 353 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 WDR66Q8TBY9 1149 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 ZNF333Q96JL9 665 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
SIL1-210ENST00000508639 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
SIL1-210ENST00000508639 DOCK3Q8IZD9 2030 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 RFX7Q2KHR2 1363 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 TLR2O60603 784 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 PPIL2Q13356 520 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 ATP2B3Q16720 1220 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 GPAT2Q6NUI2 795 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 C17orf99Q6UX52 265 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 DDX4Q9NQI0 724 aaKnown RBP13.13□□□□□ -0.31
SIL1-210ENST00000508639 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 KCNH4Q9UQ05 1017 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 CSADQ9Y600 493 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
SIL1-210ENST00000508639 UBTFL1P0CB47 393 aaPredicted RBP13.12□□□□□ -0.31
SIL1-210ENST00000508639 MAP3K10Q02779 954 aa13.12□□□□□ -0.31
SIL1-210ENST00000508639 CCDC102BQ68D86 513 aa13.12□□□□□ -0.31
SIL1-210ENST00000508639 INTS3Q68E01 1043 aaKnown RBP13.12□□□□□ -0.31
SIL1-210ENST00000508639 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.12□□□□□ -0.31
SIL1-210ENST00000508639 ZFYVE28Q9HCC9 887 aa13.12□□□□□ -0.31
SIL1-210ENST00000508639 CEP126Q9P2H0 1117 aa13.12□□□□□ -0.31
SIL1-210ENST00000508639 GAKO14976 1311 aa13.12□□□□□ -0.31
SIL1-210ENST00000508639 PTPRFP10586 1907 aa13.11□□□□□ -0.31
SIL1-210ENST00000508639 DDTLA6NHG4 134 aaPredicted RBP13.11□□□□□ -0.31
SIL1-210ENST00000508639 CETPP11597 493 aa13.11□□□□□ -0.31
SIL1-210ENST00000508639 LACTBP83111 547 aaPredicted RBP13.11□□□□□ -0.31
SIL1-210ENST00000508639 PPATQ06203 517 aa13.11□□□□□ -0.31
SIL1-210ENST00000508639 RASGRF1Q13972 1273 aa13.11□□□□□ -0.31
SIL1-210ENST00000508639 ZNF341Q9BYN7 854 aa13.11□□□□□ -0.31
SIL1-210ENST00000508639 USP40Q9NVE5 1235 aa13.11□□□□□ -0.31
SIL1-210ENST00000508639 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
SIL1-210ENST00000508639 MAST3O60307 1309 aa13.11□□□□□ -0.31
SIL1-210ENST00000508639 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
SIL1-210ENST00000508639 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
SIL1-210ENST00000508639 IL15P40933 162 aaPredicted RBP13.1□□□□□ -0.31
SIL1-210ENST00000508639 RHBDL3P58872 404 aa13.1□□□□□ -0.31
SIL1-210ENST00000508639 TFCP2Q12800 502 aa13.1□□□□□ -0.31
SIL1-210ENST00000508639 SNAPC2Q13487 334 aa13.1□□□□□ -0.31
SIL1-210ENST00000508639 MTX1Q13505 466 aa13.1□□□□□ -0.31
SIL1-210ENST00000508639 NOL9Q5SY16 702 aaKnown RBP13.1□□□□□ -0.31
SIL1-210ENST00000508639 PI16Q6UXB8 463 aa13.1□□□□□ -0.31
SIL1-210ENST00000508639 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
SIL1-210ENST00000508639 IDI2Q9BXS1 227 aa13.1□□□□□ -0.31
SIL1-210ENST00000508639 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
SIL1-210ENST00000508639 BCAR3O75815 825 aa13.09□□□□□ -0.31
SIL1-210ENST00000508639 LDHBP07195 334 aaKnown RBP13.09□□□□□ -0.31
SIL1-210ENST00000508639 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
SIL1-210ENST00000508639 RGS3P49796 1198 aa13.09□□□□□ -0.31
SIL1-210ENST00000508639 RRP1BQ14684 758 aaKnown RBP13.09□□□□□ -0.31
SIL1-210ENST00000508639 MTFR1Q15390 333 aa13.09□□□□□ -0.31
SIL1-210ENST00000508639 CCDC84Q86UT8 332 aaPredicted RBP13.09□□□□□ -0.31
SIL1-210ENST00000508639 FAM163AQ96GL9 167 aaPredicted RBP13.09□□□□□ -0.31
SIL1-210ENST00000508639 TRIM47Q96LD4 638 aa13.09□□□□□ -0.31
SIL1-210ENST00000508639 ZCCHC17Q9NP64 241 aaKnown RBP13.09□□□□□ -0.31
SIL1-210ENST00000508639 TMOD2Q9NZR1 351 aa13.09□□□□□ -0.31
SIL1-210ENST00000508639 MGAMO43451 1857 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
SIL1-210ENST00000508639 RANBP2P49792 3224 aaKnown RBP13.08□□□□□ -0.32
SIL1-210ENST00000508639 PNMA6EA0A0J9YXQ4 647 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 PDHXO00330 501 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 BCRP11274 1271 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 DCAF15Q66K64 600 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 ANKRD23Q86SG2 305 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 SHISA4Q96DD7 197 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
SIL1-210ENST00000508639 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.32
SIL1-210ENST00000508639 DOCK2Q92608 1830 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms