RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
HTT-204ENST00000508321 APOBEC3FQ8IUX4 373 aaKnown RBP12.37□□□□□ -0.43
HTT-204ENST00000508321 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
HTT-204ENST00000508321 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
HTT-204ENST00000508321 ZNF384Q8TF68 577 aa12.37□□□□□ -0.43
HTT-204ENST00000508321 APPBP2Q92624 585 aa12.37□□□□□ -0.43
HTT-204ENST00000508321 EDC3Q96F86 508 aaKnown RBP12.37□□□□□ -0.43
HTT-204ENST00000508321 RAD50Q92878 1312 aa12.37□□□□□ -0.43
HTT-204ENST00000508321 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
HTT-204ENST00000508321 TCRBV5S4A2TA0A5A2 114 aa12.36□□□□□ -0.43
HTT-204ENST00000508321 SHTN1A0MZ66 631 aa12.36□□□□□ -0.43
HTT-204ENST00000508321 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
HTT-204ENST00000508321 BTDP43251 543 aa12.36□□□□□ -0.43
HTT-204ENST00000508321 PPP4CP60510 307 aa12.36□□□□□ -0.43
HTT-204ENST00000508321 FKBP1CQ5VVH2 108 aa12.36□□□□□ -0.43
HTT-204ENST00000508321 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
HTT-204ENST00000508321 RRAGCQ9HB90 399 aa12.36□□□□□ -0.43
HTT-204ENST00000508321 PGAP2Q9UHJ9 254 aa12.36□□□□□ -0.43
HTT-204ENST00000508321 PPP2R3BQ9Y5P8 575 aa12.36□□□□□ -0.43
HTT-204ENST00000508321 LAMB1P07942 1786 aa12.35□□□□□ -0.43
HTT-204ENST00000508321 SDSP20132 328 aa12.35□□□□□ -0.43
HTT-204ENST00000508321 EAPPQ56P03 285 aaPredicted RBP12.35□□□□□ -0.43
HTT-204ENST00000508321 APOBEC3HQ6NTF7 200 aaKnown RBP12.35□□□□□ -0.43
HTT-204ENST00000508321 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
HTT-204ENST00000508321 GGA3Q9NZ52 723 aa12.35□□□□□ -0.43
HTT-204ENST00000508321 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 KIF3CO14782 793 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 EGFRP00533 1210 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 TNNI2P48788 182 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 MFAP1P55081 439 aaKnown RBP12.34□□□□□ -0.43
HTT-204ENST00000508321 ZMYM1Q5SVZ6 1142 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 CASC1Q6TDU7 716 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 ADGRA1Q86SQ6 560 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 RBM46Q8TBY0 533 aaKnown RBP12.34□□□□□ -0.43
HTT-204ENST00000508321 RUFY2Q8WXA3 655 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 DCPSQ96C86 337 aaKnown RBP12.34□□□□□ -0.43
HTT-204ENST00000508321 IDI2Q9BXS1 227 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 HELLSQ9NRZ9 838 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
HTT-204ENST00000508321 MYH1P12882 1939 aa12.34□□□□□ -0.43
HTT-204ENST00000508321 POLR2AP24928 1970 aaKnown RBP12.34□□□□□ -0.43
HTT-204ENST00000508321 LAMA4Q16363 1823 aa12.33□□□□□ -0.44
HTT-204ENST00000508321 GNAT2P19087 354 aa12.33□□□□□ -0.44
HTT-204ENST00000508321 HIRAP54198 1017 aaPredicted RBP12.33□□□□□ -0.44
HTT-204ENST00000508321 RHBDL3P58872 404 aa12.33□□□□□ -0.44
HTT-204ENST00000508321 NBPF9Q3BBW0 867 aa12.33□□□□□ -0.44
HTT-204ENST00000508321 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
HTT-204ENST00000508321 ANGEL2Q5VTE6 544 aaKnown RBP12.33□□□□□ -0.44
HTT-204ENST00000508321 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
HTT-204ENST00000508321 FAM83AQ86UY5 434 aa12.33□□□□□ -0.44
HTT-204ENST00000508321 SULF1Q8IWU6 871 aa12.33□□□□□ -0.44
HTT-204ENST00000508321 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
HTT-204ENST00000508321 PRMT6Q96LA8 375 aaPredicted RBP12.33□□□□□ -0.44
HTT-204ENST00000508321 RIOK1Q9BRS2 568 aaKnown RBP12.33□□□□□ -0.44
HTT-204ENST00000508321 CRNKL1Q9BZJ0 848 aaKnown RBP12.33□□□□□ -0.44
HTT-204ENST00000508321 ZNF70Q9UC06 446 aaPredicted RBP12.33□□□□□ -0.44
HTT-204ENST00000508321 ATRNL1Q5VV63 1379 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 ENTPD3O75355 529 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 CDC45O75419 566 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 TOMM70O94826 608 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 MBD4O95243 580 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 TEX11Q8IYF3 940 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 MIGA1Q8NAN2 632 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 HOOK2Q96ED9 719 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 DDRGK1Q96HY6 314 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 TDRD3Q9H7E2 651 aaKnown RBP12.32□□□□□ -0.44
HTT-204ENST00000508321 VEZTQ9HBM0 779 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 USP40Q9NVE5 1235 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 TAOK2Q9UL54 1235 aa12.32□□□□□ -0.44
HTT-204ENST00000508321 PAPPA2Q9BXP8 1791 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 CLRN2A0PK11 232 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 GPAA1O43292 621 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
HTT-204ENST00000508321 MCMDC2Q4G0Z9 681 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 CDC37L1Q7L3B6 337 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 SKAP1Q86WV1 359 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 CLEC11AQ9Y240 323 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 PCDHAC2Q9Y5I4 1007 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 CCDC171Q6TFL3 1326 aa12.31□□□□□ -0.44
HTT-204ENST00000508321 BAZ2AQ9UIF9 1905 aaKnown RBP12.31□□□□□ -0.44
HTT-204ENST00000508321 A0A0D9SFI3 127 aa12.3□□□□□ -0.44
HTT-204ENST00000508321 WDHD1O75717 1129 aaPredicted RBP12.3□□□□□ -0.44
HTT-204ENST00000508321 FSTL1Q12841 308 aa12.3□□□□□ -0.44
HTT-204ENST00000508321 NMIQ13287 307 aaPredicted RBP12.3□□□□□ -0.44
HTT-204ENST00000508321 KRT26Q7Z3Y9 468 aa12.3□□□□□ -0.44
HTT-204ENST00000508321 LCORLQ8N3X6 602 aa12.3□□□□□ -0.44
HTT-204ENST00000508321 SH3RF3Q8TEJ3 882 aaPredicted RBP12.3□□□□□ -0.44
HTT-204ENST00000508321 OSBP2Q969R2 916 aa12.3□□□□□ -0.44
HTT-204ENST00000508321 PUS7LQ9H0K6 701 aaKnown RBP12.3□□□□□ -0.44
HTT-204ENST00000508321 DHX36Q9H2U1 1008 aaKnown RBP12.3□□□□□ -0.44
HTT-204ENST00000508321 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
HTT-204ENST00000508321 MYH8P13535 1937 aa12.3□□□□□ -0.44
HTT-204ENST00000508321 ZMYM6O95789 1325 aa12.3□□□□□ -0.44
HTT-204ENST00000508321 FLT1P17948 1338 aa12.3□□□□□ -0.44
HTT-204ENST00000508321 M0R2C6 588 aa12.29□□□□□ -0.44
HTT-204ENST00000508321 CHMLP26374 656 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms