RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ARID3CA6NKF2 412 aa9.05□□□□□ -0.96
TRAPPC13-209ENST00000508304 PPP1R15AO75807 674 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC13-209ENST00000508304 MISP3Q96FF7 219 aa9.05□□□□□ -0.96
TRAPPC13-209ENST00000508304 LGR6Q9HBX8 967 aa9.05□□□□□ -0.96
TRAPPC13-209ENST00000508304 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC13-209ENST00000508304 PTPN12Q05209 780 aaKnown RBP9.04□□□□□ -0.96
TRAPPC13-209ENST00000508304 AP3B2Q13367 1082 aa9.04□□□□□ -0.96
TRAPPC13-209ENST00000508304 PDE3AQ14432 1141 aa9.04□□□□□ -0.96
TRAPPC13-209ENST00000508304 CYP27C1Q4G0S4 372 aa9.04□□□□□ -0.96
TRAPPC13-209ENST00000508304 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
TRAPPC13-209ENST00000508304 TMPRSS2O15393 492 aa9.03□□□□□ -0.96
TRAPPC13-209ENST00000508304 EHD4Q9H223 541 aa9.03□□□□□ -0.96
TRAPPC13-209ENST00000508304 BIN1O00499 593 aa9.02□□□□□ -0.97
TRAPPC13-209ENST00000508304 NEFLP07196 543 aa9.02□□□□□ -0.97
TRAPPC13-209ENST00000508304 BNIP3Q12983 259 aa9.02□□□□□ -0.97
TRAPPC13-209ENST00000508304 CRIM1Q9NZV1 1036 aa9.02□□□□□ -0.97
TRAPPC13-209ENST00000508304 EGFL7Q9UHF1 273 aa9.02□□□□□ -0.97
TRAPPC13-209ENST00000508304 CARNS1A5YM72 827 aa9.01□□□□□ -0.97
TRAPPC13-209ENST00000508304 ICMTO60725 284 aa9.01□□□□□ -0.97
TRAPPC13-209ENST00000508304 FUT4P22083 530 aa9.01□□□□□ -0.97
TRAPPC13-209ENST00000508304 ECM1Q16610 540 aa9.01□□□□□ -0.97
TRAPPC13-209ENST00000508304 PLD6Q8N2A8 252 aaKnown RBP9.01□□□□□ -0.97
TRAPPC13-209ENST00000508304 NETO1Q8TDF5 533 aa9.01□□□□□ -0.97
TRAPPC13-209ENST00000508304 WDR89Q96FK6 387 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC13-209ENST00000508304 ABCB6Q9NP58 842 aa9.01□□□□□ -0.97
TRAPPC13-209ENST00000508304 NPHS2Q9NP85 383 aa9.01□□□□□ -0.97
TRAPPC13-209ENST00000508304 FAM87AP0C7U9 286 aa9□□□□□ -0.97
TRAPPC13-209ENST00000508304 LIG1P18858 919 aa9□□□□□ -0.97
TRAPPC13-209ENST00000508304 CDK5R2Q13319 367 aa9□□□□□ -0.97
TRAPPC13-209ENST00000508304 RPS26P11Q5JNZ5 115 aaPredicted RBP9□□□□□ -0.97
TRAPPC13-209ENST00000508304 ZNF648Q5T619 568 aaPredicted RBP9□□□□□ -0.97
TRAPPC13-209ENST00000508304 PRPF40BQ6NWY9 871 aaKnown RBP9□□□□□ -0.97
TRAPPC13-209ENST00000508304 ATG4DQ86TL0 474 aaPredicted RBP9□□□□□ -0.97
TRAPPC13-209ENST00000508304 CCDC82Q8N4S0 544 aa9□□□□□ -0.97
TRAPPC13-209ENST00000508304 CCDC86Q9H6F5 360 aaKnown RBP9□□□□□ -0.97
TRAPPC13-209ENST00000508304 BRPF3Q9ULD4 1205 aa9□□□□□ -0.97
TRAPPC13-209ENST00000508304 CD8BP10966 210 aa8.99□□□□□ -0.97
TRAPPC13-209ENST00000508304 ORC1Q13415 861 aa8.99□□□□□ -0.97
TRAPPC13-209ENST00000508304 FAM181AQ8N9Y4 354 aa8.99□□□□□ -0.97
TRAPPC13-209ENST00000508304 GLIS3Q8NEA6 775 aa8.99□□□□□ -0.97
TRAPPC13-209ENST00000508304 FANCD2OSQ96PS1 177 aa8.99□□□□□ -0.97
TRAPPC13-209ENST00000508304 ATXN3LQ9H3M9 355 aa8.99□□□□□ -0.97
TRAPPC13-209ENST00000508304 ZNF862O60290 1169 aa8.98□□□□□ -0.97
TRAPPC13-209ENST00000508304 CPNE3O75131 537 aaKnown RBP8.98□□□□□ -0.97
TRAPPC13-209ENST00000508304 FAM129BQ96TA1 746 aa8.98□□□□□ -0.97
TRAPPC13-209ENST00000508304 KRTAP4-9Q9BYQ8 210 aa8.98□□□□□ -0.97
TRAPPC13-209ENST00000508304 VAV3Q9UKW4 847 aa8.98□□□□□ -0.97
TRAPPC13-209ENST00000508304 PCDHGC5Q9Y5F6 944 aa8.98□□□□□ -0.97
TRAPPC13-209ENST00000508304 U3KQE9 123 aa8.98□□□□□ -0.97
TRAPPC13-209ENST00000508304 RNASE1P07998 156 aaKnown RBP8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 ID3Q02535 119 aa8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 PRKCQQ04759 706 aa8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 FAAP100Q0VG06 881 aa8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 KIF4BQ2VIQ3 1234 aa8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 PIDD1Q9HB75 910 aa8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 RC3H2Q9HBD1 1191 aaKnown RBP8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 DISC1Q9NRI5 854 aa8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 MBNL3Q9NUK0 354 aaKnown RBP8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 ADAMTS6Q9UKP5 1117 aa8.97□□□□□ -0.97
TRAPPC13-209ENST00000508304 SLFN14P0C7P3 912 aa8.96□□□□□ -0.98
TRAPPC13-209ENST00000508304 ARHGAP4P98171 946 aa8.96□□□□□ -0.98
TRAPPC13-209ENST00000508304 SMYD4Q8IYR2 804 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC13-209ENST00000508304 MKNK2Q9HBH9 465 aa8.96□□□□□ -0.98
TRAPPC13-209ENST00000508304 TMEM238LA0A1B0GVL6 79 aa8.95□□□□□ -0.98
TRAPPC13-209ENST00000508304 H3BRB1 525 aa8.95□□□□□ -0.98
TRAPPC13-209ENST00000508304 PDE3BQ13370 1112 aa8.95□□□□□ -0.98
TRAPPC13-209ENST00000508304 ZNF124Q15973 351 aa8.95□□□□□ -0.98
TRAPPC13-209ENST00000508304 FAM168AQ92567 244 aa8.95□□□□□ -0.98
TRAPPC13-209ENST00000508304 ZC3H12CQ9C0D7 883 aaKnown RBP8.95□□□□□ -0.98
TRAPPC13-209ENST00000508304 TUT1Q9H6E5 874 aaKnown RBP8.95□□□□□ -0.98
TRAPPC13-209ENST00000508304 KRT82Q9NSB4 513 aa8.95□□□□□ -0.98
TRAPPC13-209ENST00000508304 NDUFB5O43674 189 aa8.94□□□□□ -0.98
TRAPPC13-209ENST00000508304 FARP2O94887 1054 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC13-209ENST00000508304 IFI16Q16666 785 aaKnown RBP8.94□□□□□ -0.98
TRAPPC13-209ENST00000508304 GLYCTKQ8IVS8 523 aa8.94□□□□□ -0.98
TRAPPC13-209ENST00000508304 CCDC74AQ96AQ1 378 aa8.94□□□□□ -0.98
TRAPPC13-209ENST00000508304 DBX1A6NMT0 343 aa8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 LEFTY1O75610 366 aa8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 IGHA2P01877 340 aa8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 GSTP1P09211 210 aaKnown RBP8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 CD96P40200 585 aa8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 ZNF157P51786 506 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 OXCT1P55809 520 aa8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 TTLL4Q14679 1199 aa8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 LCE4AQ5TA78 99 aa8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 LRRN4CLQ8ND94 238 aa8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 DNAJC25Q9H1X3 360 aa8.93□□□□□ -0.98
TRAPPC13-209ENST00000508304 EIF1AYO14602 144 aaKnown RBP8.92□□□□□ -0.98
TRAPPC13-209ENST00000508304 CEACAM5P06731 702 aa8.92□□□□□ -0.98
TRAPPC13-209ENST00000508304 SERPINB4P48594 390 aa8.92□□□□□ -0.98
TRAPPC13-209ENST00000508304 PI4K2BQ8TCG2 481 aa8.92□□□□□ -0.98
TRAPPC13-209ENST00000508304 TMEM40Q8WWA1 233 aa8.92□□□□□ -0.98
TRAPPC13-209ENST00000508304 CITED4Q96RK1 184 aa8.92□□□□□ -0.98
TRAPPC13-209ENST00000508304 DUSP23Q9BVJ7 150 aa8.92□□□□□ -0.98
TRAPPC13-209ENST00000508304 TRAK1Q9UPV9 953 aa8.92□□□□□ -0.98
TRAPPC13-209ENST00000508304 GRM2Q14416 872 aa8.91□□□□□ -0.98
TRAPPC13-209ENST00000508304 AOC3Q16853 763 aa8.91□□□□□ -0.98
TRAPPC13-209ENST00000508304 PDZD3Q86UT5 571 aa8.91□□□□□ -0.98
TRAPPC13-209ENST00000508304 HRASLS5Q96KN8 279 aa8.91□□□□□ -0.98
TRAPPC13-209ENST00000508304 PCOLCE2Q9UKZ9 415 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms