RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 RAXQ9Y2V3 346 aa2.85□□□□□ -1.95
SMN2-208ENST00000508258 TMEM238LA0A1B0GVL6 79 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 GSC2O15499 205 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 IGLV1-40P01703 118 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 FGRP09769 529 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 BMP3P12645 472 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 XRCC5P13010 732 aaKnown RBP2.84□□□□□ -1.95
SMN2-208ENST00000508258 ATF4P18848 351 aaPredicted RBP2.84□□□□□ -1.95
SMN2-208ENST00000508258 RXRBP28702 533 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 DNAJA1P31689 397 aaKnown RBP2.84□□□□□ -1.95
SMN2-208ENST00000508258 GSTM4Q03013 218 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 ARID5AQ03989 594 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 NUTM2GQ5VZR2 741 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 HGSNATQ68CP4 663 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 ANKRD34AQ69YU3 496 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 KIAA1211Q6ZU35 1233 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 MCF2L2Q86YR7 1114 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 TMEM102Q8N9M5 508 aaPredicted RBP2.84□□□□□ -1.95
SMN2-208ENST00000508258 RASGRP4Q8TDF6 673 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 BSNDQ8WZ55 320 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 DHX38Q92620 1227 aaKnown RBP2.84□□□□□ -1.95
SMN2-208ENST00000508258 WNT8BQ93098 351 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 SPATA32Q96LK8 384 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 TCF12Q99081 682 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 RNF208Q9H0X6 261 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 EHD4Q9H223 541 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 OSGEPQ9NPF4 335 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 KCNQ5Q9NR82 932 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 KBTBD4Q9NVX7 518 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 PPP4R2Q9NY27 417 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 PPM1HQ9ULR3 514 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 RNF112Q9ULX5 631 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 SOX13Q9UN79 622 aa2.84□□□□□ -1.95
SMN2-208ENST00000508258 HMX2A2RU54 273 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 METTL12A8MUP2 240 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 NFKBIEO00221 500 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 SMARCA5O60264 1052 aaPredicted RBP2.83□□□□□ -1.96
SMN2-208ENST00000508258 TGFB1P01137 390 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 ITPKAP23677 461 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 CANXP27824 592 aaKnown RBP2.83□□□□□ -1.96
SMN2-208ENST00000508258 GTF2F1P35269 517 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMN2-208ENST00000508258 PREPP48147 710 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 USP11P51784 963 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 PAK2Q13177 524 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 UVSSAQ2YD98 709 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 GIMAP6Q6P9H5 292 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 Q6ZS46 218 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 SV2BQ7L1I2 683 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 VPS37DQ86XT2 251 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 CCNJLQ8IV13 435 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 TRIM42Q8IWZ5 723 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 ARMC10Q8N2F6 343 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 C12orf50Q8NA57 414 aaPredicted RBP2.83□□□□□ -1.96
SMN2-208ENST00000508258 NXPE3Q969Y0 559 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 GPRASP2Q96D09 838 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 MYRFLQ96LU7 910 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 PUS7Q96PZ0 661 aaKnown RBP2.83□□□□□ -1.96
SMN2-208ENST00000508258 DNAJC2Q99543 621 aaKnown RBP2.83□□□□□ -1.96
SMN2-208ENST00000508258 LNPKQ9C0E8 428 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 C7orf69Q9H7B7 122 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 LIN7BQ9HAP6 207 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 ADAMTS1Q9UHI8 967 aa2.83□□□□□ -1.96
SMN2-208ENST00000508258 TTF2Q9UNY4 1162 aaKnown RBP2.83□□□□□ -1.96
SMN2-208ENST00000508258 SOX1O00570 391 aaPredicted RBP2.82□□□□□ -1.96
SMN2-208ENST00000508258 COBLO75128 1261 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 RLBP1P12271 317 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 GARTP22102 1010 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 GRIK1P39086 918 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 GRIA4P48058 902 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 FCGRTP55899 365 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 NFIAQ12857 509 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 PWP1Q13610 501 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 CCDC85BQ15834 202 aaPredicted RBP2.82□□□□□ -1.96
SMN2-208ENST00000508258 CCDC144BQ3MJ40 725 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 SOGA3Q5TF21 947 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.82□□□□□ -1.96
SMN2-208ENST00000508258 BEND4Q6ZU67 534 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 VN1R5Q7Z5H4 357 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 NOP9Q86U38 636 aaKnown RBP2.82□□□□□ -1.96
SMN2-208ENST00000508258 RELL1Q8IUW5 271 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 FAM20CQ8IXL6 584 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 FBXL6Q8N531 539 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 EAF1Q96JC9 268 aaPredicted RBP2.82□□□□□ -1.96
SMN2-208ENST00000508258 SEC16BQ96JE7 1060 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 RHOVQ96L33 236 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 TMEM74Q96NL1 305 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 DBNDD2Q9BQY9 259 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 TRIM56Q9BRZ2 755 aaKnown RBP2.82□□□□□ -1.96
SMN2-208ENST00000508258 SPON2Q9BUD6 331 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 HIRIP3Q9BW71 556 aaPredicted RBP2.82□□□□□ -1.96
SMN2-208ENST00000508258 BHLHE41Q9C0J9 482 aaPredicted RBP2.82□□□□□ -1.96
SMN2-208ENST00000508258 ZFYVE1Q9HBF4 777 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 CYP4F12Q9HCS2 524 aa2.82□□□□□ -1.96
SMN2-208ENST00000508258 A0A096LPE4 126 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 A0A1W2PPZ6 126 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 ENC1O14682 589 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 TM4SF5O14894 197 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 GREM1O60565 184 aa2.81□□□□□ -1.96
SMN2-208ENST00000508258 ESRRAP11474 423 aaPredicted RBP2.81□□□□□ -1.96
SMN2-208ENST00000508258 DRD2P14416 443 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms