RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 TMEM94Q12767 1356 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 CCDC66A2RUB6 948 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 VWA3AA6NCI4 1184 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 ZNF213O14771 459 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 FOXN1O15353 648 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 A1BGP04217 495 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 TUBB4AP04350 444 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 CDC27P30260 824 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 DHX8Q14562 1220 aaKnown RBP15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 KRT40Q6A162 431 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 MYH7P12883 1935 aa15.48■□□□□ 0.07
SNCAIP-209ENST00000508017 CPDO75976 1380 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 UBE2Q2LH0YL09 131 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 GPAA1O43292 621 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 CCP110O43303 1012 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 CBFA2T2O43439 604 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 CIAO1O76071 339 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 BMP6P22004 513 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 LONRF3Q496Y0 759 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 CCDC158Q5M9N0 1113 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 TMCO3Q6UWJ1 677 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 CYB5R4Q7L1T6 521 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 MAP3K14Q99558 947 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 APPBP2Q92624 585 aa15.47■□□□□ 0.07
SNCAIP-209ENST00000508017 CYP2C19P33261 490 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 CHRNA2Q15822 529 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 SPECC1Q5M775 1068 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 RESP18Q5W5W9 173 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 TBC1D10CQ8IV04 446 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 PPP2R2CQ9Y2T4 447 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 ZMYM6O95789 1325 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 POLR3GO15318 223 aaPredicted RBP15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 PPP6R2O75170 966 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 ZFYP08048 801 aaPredicted RBP15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 METAP2P50579 478 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 LRRFIP1Q32MZ4 808 aaKnown RBP15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 DDX17Q92841 729 aaKnown RBP15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 WDR24Q96S15 920 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 PCDHA5Q9Y5H7 936 aa15.46■□□□□ 0.07
SNCAIP-209ENST00000508017 GNL2Q13823 731 aaKnown RBP15.45■□□□□ 0.06
SNCAIP-209ENST00000508017 OLFM4Q6UX06 510 aa15.45■□□□□ 0.06
SNCAIP-209ENST00000508017 CABLES1Q8TDN4 633 aa15.45■□□□□ 0.06
SNCAIP-209ENST00000508017 ARGLU1Q9NWB6 273 aaPredicted RBP15.45■□□□□ 0.06
SNCAIP-209ENST00000508017 MYO5AQ9Y4I1 1855 aaKnown RBP15.45■□□□□ 0.06
SNCAIP-209ENST00000508017 EFCAB8A8MWE9 144 aa15.45■□□□□ 0.06
SNCAIP-209ENST00000508017 SASH3O75995 380 aa15.45■□□□□ 0.06
SNCAIP-209ENST00000508017 MICU3Q86XE3 530 aa15.45■□□□□ 0.06
SNCAIP-209ENST00000508017 ANGEL1Q9UNK9 670 aaKnown RBP15.45■□□□□ 0.06
SNCAIP-209ENST00000508017 FAM237AA0A1B0GTK4 181 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 KRBA2Q6ZNG9 492 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 TOGARAM2Q6ZUX3 1019 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 PDILTQ8N807 584 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 CCDC191Q8NCU4 936 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 CNNM3Q8NE01 707 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 MYL10Q9BUA6 226 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 C19orf44Q9H6X5 657 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 ALS2Q96Q42 1657 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 COL18A1P39060 1754 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 SH2B2O14492 632 aaPredicted RBP15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 ARHGAP6O43182 974 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 ZSCAN12O43309 604 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 RANBP6O60518 1105 aaKnown RBP15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 ADKP55263 362 aaKnown RBP15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 GNG11P61952 73 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 TBX2Q13207 712 aaPredicted RBP15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 CCDC57Q2TAC2 916 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 JMYQ8N9B5 988 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 SRRTQ9BXP5 876 aaKnown RBP15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 KCNH3Q9ULD8 1083 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 PKD1L3Q7Z443 1732 aa15.44■□□□□ 0.06
SNCAIP-209ENST00000508017 FMR1Q06787 632 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 APOA5Q6Q788 366 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 FCHSD1Q86WN1 690 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 BAG1Q99933 345 aaPredicted RBP15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 INCENPQ9NQS7 918 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 ATG3Q9NT62 314 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 B4E1Z4 1266 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 TBC1D8O95759 1140 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 FAM193AP78312 1265 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 GRIN1Q05586 938 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 ZNF827Q17R98 1081 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 CCDC102BQ68D86 513 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 TRMT44Q8IYL2 757 aaKnown RBP15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 ZCCHC17Q9NP64 241 aaKnown RBP15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 WDR19Q8NEZ3 1342 aa15.43■□□□□ 0.06
SNCAIP-209ENST00000508017 CUTAO60888 179 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 CASQ1P31415 396 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 IRX5P78411 483 aaPredicted RBP15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 TRDNQ13061 729 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 TEX35Q5T0J7 233 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 TC2NQ8N9U0 490 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 DESI2Q9BSY9 194 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 TMEM51Q9NW97 253 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 AKAP11Q9UKA4 1901 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms