RNA–Protein interactions for RNA: ENST00000507458.2

SMN2-207, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-207ENST00000507458 ASAP3Q8TDY4 903 aa9.09□□□□□ -0.95
SMN2-207ENST00000507458 KCNF1Q9H3M0 494 aa9.09□□□□□ -0.95
SMN2-207ENST00000507458 AMOTL2Q9Y2J4 779 aa9.09□□□□□ -0.95
SMN2-207ENST00000507458 HIF3AQ9Y2N7 669 aa9.09□□□□□ -0.95
SMN2-207ENST00000507458 GPR182O15218 404 aa9.08□□□□□ -0.96
SMN2-207ENST00000507458 GAS2O43903 313 aaKnown RBP9.08□□□□□ -0.96
SMN2-207ENST00000507458 CPNE3O75131 537 aaKnown RBP9.08□□□□□ -0.96
SMN2-207ENST00000507458 IGHA2P01877 340 aa9.08□□□□□ -0.96
SMN2-207ENST00000507458 GRIK1P39086 918 aa9.08□□□□□ -0.96
SMN2-207ENST00000507458 PLCB3Q01970 1234 aa9.08□□□□□ -0.96
SMN2-207ENST00000507458 VN1R5Q7Z5H4 357 aa9.08□□□□□ -0.96
SMN2-207ENST00000507458 ZDHHC13Q8IUH4 622 aa9.08□□□□□ -0.96
SMN2-207ENST00000507458 FAM83CQ9BQN1 747 aa9.08□□□□□ -0.96
SMN2-207ENST00000507458 ATP10BO94823 1461 aa9.08□□□□□ -0.96
SMN2-207ENST00000507458 EEA1Q15075 1411 aa9.07□□□□□ -0.96
SMN2-207ENST00000507458 SOX1O00570 391 aaPredicted RBP9.07□□□□□ -0.96
SMN2-207ENST00000507458 HGSNATQ68CP4 663 aa9.07□□□□□ -0.96
SMN2-207ENST00000507458 BEND4Q6ZU67 534 aa9.07□□□□□ -0.96
SMN2-207ENST00000507458 USP26Q9BXU7 913 aa9.07□□□□□ -0.96
SMN2-207ENST00000507458 BHLHE41Q9C0J9 482 aaPredicted RBP9.07□□□□□ -0.96
SMN2-207ENST00000507458 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
SMN2-207ENST00000507458 MEGF11A6BM72 1044 aa9.06□□□□□ -0.96
SMN2-207ENST00000507458 NUTM2GQ5VZR2 741 aa9.06□□□□□ -0.96
SMN2-207ENST00000507458 INTS5Q6P9B9 1019 aaKnown RBP9.06□□□□□ -0.96
SMN2-207ENST00000507458 SOX17Q9H6I2 414 aaPredicted RBP9.06□□□□□ -0.96
SMN2-207ENST00000507458 ZFYVE28Q9HCC9 887 aa9.06□□□□□ -0.96
SMN2-207ENST00000507458 ARAP3Q8WWN8 1544 aa9.05□□□□□ -0.96
SMN2-207ENST00000507458 EIF4EBP3O60516 100 aaPredicted RBP9.05□□□□□ -0.96
SMN2-207ENST00000507458 ATP2B2Q01814 1243 aa9.05□□□□□ -0.96
SMN2-207ENST00000507458 FMR1Q06787 632 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMN2-207ENST00000507458 DSC3Q14574 896 aa9.05□□□□□ -0.96
SMN2-207ENST00000507458 FBF1Q8TES7 1133 aa9.05□□□□□ -0.96
SMN2-207ENST00000507458 NIF3L1Q9GZT8 377 aa9.05□□□□□ -0.96
SMN2-207ENST00000507458 LATS2Q9NRM7 1088 aa9.05□□□□□ -0.96
SMN2-207ENST00000507458 KIAA1324LA8MWY0 1029 aaPredicted RBP9.04□□□□□ -0.96
SMN2-207ENST00000507458 EIF1AYO14602 144 aaKnown RBP9.04□□□□□ -0.96
SMN2-207ENST00000507458 PEAR1Q5VY43 1037 aaPredicted RBP9.04□□□□□ -0.96
SMN2-207ENST00000507458 C12orf50Q8NA57 414 aaPredicted RBP9.04□□□□□ -0.96
SMN2-207ENST00000507458 FBXO41Q8TF61 875 aa9.04□□□□□ -0.96
SMN2-207ENST00000507458 CSRNP1Q96S65 589 aa9.04□□□□□ -0.96
SMN2-207ENST00000507458 CYP4F12Q9HCS2 524 aa9.04□□□□□ -0.96
SMN2-207ENST00000507458 PHLDB1Q86UU1 1377 aa9.03□□□□□ -0.96
SMN2-207ENST00000507458 KIF21BO75037 1637 aa9.03□□□□□ -0.96
SMN2-207ENST00000507458 LOC100289279A0A1B0GTE1 492 aa9.03□□□□□ -0.96
SMN2-207ENST00000507458 RAPGEF3O95398 923 aa9.03□□□□□ -0.96
SMN2-207ENST00000507458 MED26O95402 600 aa9.03□□□□□ -0.96
SMN2-207ENST00000507458 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
SMN2-207ENST00000507458 TMPRSS13Q9BYE2 586 aa9.03□□□□□ -0.96
SMN2-207ENST00000507458 ABCA9Q8IUA7 1624 aa9.02□□□□□ -0.96
SMN2-207ENST00000507458 ANKRD33BA6NCL7 494 aa9.02□□□□□ -0.97
SMN2-207ENST00000507458 RXRBP28702 533 aa9.02□□□□□ -0.97
SMN2-207ENST00000507458 ENOX2Q16206 610 aaKnown RBP9.02□□□□□ -0.97
SMN2-207ENST00000507458 ALG1LQ6GMV1 187 aa9.02□□□□□ -0.97
SMN2-207ENST00000507458 DNAJC14Q6Y2X3 702 aaPredicted RBP9.02□□□□□ -0.97
SMN2-207ENST00000507458 GALNT12Q8IXK2 581 aa9.02□□□□□ -0.97
SMN2-207ENST00000507458 SMG8Q8ND04 991 aaKnown RBP9.02□□□□□ -0.97
SMN2-207ENST00000507458 SHKBP1Q8TBC3 707 aa9.02□□□□□ -0.97
SMN2-207ENST00000507458 KRTAP9-2Q9BYQ4 174 aa9.02□□□□□ -0.97
SMN2-207ENST00000507458 SUGCTQ9HAC7 445 aa9.02□□□□□ -0.97
SMN2-207ENST00000507458 CCDC9Q9Y3X0 531 aaKnown RBP9.02□□□□□ -0.97
SMN2-207ENST00000507458 SAMD9Q5K651 1589 aa9.02□□□□□ -0.97
SMN2-207ENST00000507458 POLR3DP05423 398 aaPredicted RBP9.01□□□□□ -0.97
SMN2-207ENST00000507458 MAP4P27816 1152 aaKnown RBP9.01□□□□□ -0.97
SMN2-207ENST00000507458 ITGAEP38570 1179 aa9.01□□□□□ -0.97
SMN2-207ENST00000507458 RANGAP1P46060 587 aaPredicted RBP9.01□□□□□ -0.97
SMN2-207ENST00000507458 MFAP1P55081 439 aaKnown RBP9.01□□□□□ -0.97
SMN2-207ENST00000507458 GSTM4Q03013 218 aa9.01□□□□□ -0.97
SMN2-207ENST00000507458 ORC1Q13415 861 aa9.01□□□□□ -0.97
SMN2-207ENST00000507458 MCTP1Q6DN14 999 aa9.01□□□□□ -0.97
SMN2-207ENST00000507458 GIMAP7Q8NHV1 300 aa9.01□□□□□ -0.97
SMN2-207ENST00000507458 BCL11AQ9H165 835 aa9.01□□□□□ -0.97
SMN2-207ENST00000507458 RAPGEF6Q8TEU7 1601 aa9.01□□□□□ -0.97
SMN2-207ENST00000507458 PRR19A6NJB7 356 aa9□□□□□ -0.97
SMN2-207ENST00000507458 METTL12A8MUP2 240 aa9□□□□□ -0.97
SMN2-207ENST00000507458 SGO2Q562F6 1265 aa9□□□□□ -0.97
SMN2-207ENST00000507458 PNMA6FA0A0J9YX94 578 aa8.99□□□□□ -0.97
SMN2-207ENST00000507458 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.99□□□□□ -0.97
SMN2-207ENST00000507458 WDR64B1ANS9 1081 aa8.99□□□□□ -0.97
SMN2-207ENST00000507458 TIAF1O95411 115 aa8.99□□□□□ -0.97
SMN2-207ENST00000507458 MAPK8P45983 427 aa8.99□□□□□ -0.97
SMN2-207ENST00000507458 EAPPQ56P03 285 aaPredicted RBP8.99□□□□□ -0.97
SMN2-207ENST00000507458 EXOSC6Q5RKV6 272 aaKnown RBP8.99□□□□□ -0.97
SMN2-207ENST00000507458 MFSD14AQ96MC6 490 aa8.99□□□□□ -0.97
SMN2-207ENST00000507458 NUP153P49790 1475 aaKnown RBP8.99□□□□□ -0.97
SMN2-207ENST00000507458 NEO1Q92859 1461 aa8.99□□□□□ -0.97
SMN2-207ENST00000507458 LMTK3Q96Q04 1460 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 A0A096LPE4 126 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 A0A1W2PPZ6 126 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 PLEKHD1A6NEE1 506 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 SPINK2P20155 84 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 IRAK1P51617 712 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 USP11P51784 963 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 GP2P55259 537 aaKnown RBP8.98□□□□□ -0.97
SMN2-207ENST00000507458 PCDH1Q08174 1060 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 NPAS4Q8IUM7 802 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 CCNJLQ8IV13 435 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 CCDC74AQ96AQ1 378 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 FRMD6Q96NE9 622 aa8.98□□□□□ -0.97
SMN2-207ENST00000507458 CLEC4MQ9H2X3 399 aaPredicted RBP8.98□□□□□ -0.97
SMN2-207ENST00000507458 LIN7BQ9HAP6 207 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms