RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 RASA3Q14644 834 aa10.14□□□□□ -0.79
CLDND1-214ENST00000507411 SF3B3Q15393 1217 aaKnown RBP10.14□□□□□ -0.79
CLDND1-214ENST00000507411 C9orf50Q5SZB4 431 aa10.14□□□□□ -0.79
CLDND1-214ENST00000507411 AKNAD1Q5T1N1 836 aa10.14□□□□□ -0.79
CLDND1-214ENST00000507411 C11orf16Q9NQ32 467 aa10.14□□□□□ -0.79
CLDND1-214ENST00000507411 PRKAG2Q9UGJ0 569 aa10.14□□□□□ -0.79
CLDND1-214ENST00000507411 CFAP54Q96N23 3096 aa10.14□□□□□ -0.79
CLDND1-214ENST00000507411 PDHXO00330 501 aa10.13□□□□□ -0.79
CLDND1-214ENST00000507411 BMP1P13497 986 aa10.13□□□□□ -0.79
CLDND1-214ENST00000507411 HSP90AB3PQ58FF7 597 aa10.13□□□□□ -0.79
CLDND1-214ENST00000507411 OGDHLQ9ULD0 1010 aa10.13□□□□□ -0.79
CLDND1-214ENST00000507411 STK24Q9Y6E0 443 aa10.13□□□□□ -0.79
CLDND1-214ENST00000507411 SPTBN4Q9H254 2564 aa10.13□□□□□ -0.79
CLDND1-214ENST00000507411 ECM29Q5VYK3 1845 aa10.12□□□□□ -0.79
CLDND1-214ENST00000507411 STK25O00506 426 aa10.12□□□□□ -0.79
CLDND1-214ENST00000507411 TNPO2O14787 897 aaKnown RBP10.12□□□□□ -0.79
CLDND1-214ENST00000507411 IRF6O14896 467 aa10.12□□□□□ -0.79
CLDND1-214ENST00000507411 CCDC85BQ15834 202 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-214ENST00000507411 ANKRD23Q86SG2 305 aa10.12□□□□□ -0.79
CLDND1-214ENST00000507411 ERO1BQ86YB8 467 aa10.12□□□□□ -0.79
CLDND1-214ENST00000507411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLDND1-214ENST00000507411 HMX1Q9NP08 348 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-214ENST00000507411 XDHP47989 1333 aa10.11□□□□□ -0.79
CLDND1-214ENST00000507411 MYO9BQ13459 2157 aa10.11□□□□□ -0.79
CLDND1-214ENST00000507411 ST18O60284 1047 aa10.11□□□□□ -0.79
CLDND1-214ENST00000507411 DIAPH1O60610 1272 aaKnown RBP10.11□□□□□ -0.79
CLDND1-214ENST00000507411 BCRP11274 1271 aa10.11□□□□□ -0.79
CLDND1-214ENST00000507411 COL6A1P12109 1028 aa10.11□□□□□ -0.79
CLDND1-214ENST00000507411 ATP2B4P23634 1241 aa10.11□□□□□ -0.79
CLDND1-214ENST00000507411 AAK1Q2M2I8 961 aa10.11□□□□□ -0.79
CLDND1-214ENST00000507411 RTF1Q92541 710 aaKnown RBP10.11□□□□□ -0.79
CLDND1-214ENST00000507411 ZNF428Q96B54 188 aa10.11□□□□□ -0.79
CLDND1-214ENST00000507411 PARK7Q99497 189 aaKnown RBP10.11□□□□□ -0.79
CLDND1-214ENST00000507411 ZNF576Q9H609 170 aa10.11□□□□□ -0.79
CLDND1-214ENST00000507411 CXXC1Q9P0U4 656 aaPredicted RBP10.11□□□□□ -0.79
CLDND1-214ENST00000507411 BAHCC1Q9P281 2608 aa10.1□□□□□ -0.79
CLDND1-214ENST00000507411 HMGCRP04035 888 aa10.1□□□□□ -0.79
CLDND1-214ENST00000507411 U2AF1L5P0DN76 240 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-214ENST00000507411 U2AF1Q01081 240 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLDND1-214ENST00000507411 PPIL2Q13356 520 aa10.1□□□□□ -0.79
CLDND1-214ENST00000507411 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-214ENST00000507411 TTLL5Q6EMB2 1281 aa10.1□□□□□ -0.79
CLDND1-214ENST00000507411 MCM10Q7L590 875 aa10.1□□□□□ -0.79
CLDND1-214ENST00000507411 POLR3GLQ9BT43 218 aa10.1□□□□□ -0.79
CLDND1-214ENST00000507411 WDFY4Q6ZS81 3184 aa10.1□□□□□ -0.79
CLDND1-214ENST00000507411 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
CLDND1-214ENST00000507411 COL3A1P02461 1466 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-214ENST00000507411 XIRP2A4UGR9 3374 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 PRR33A8MZF0 331 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 DNAJB2P25686 324 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 TNFAIP1Q13829 316 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 UIMC1Q96RL1 719 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 COA1Q9GZY4 146 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 PCDHAC2Q9Y5I4 1007 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 SNCAIPQ9Y6H5 919 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 LTBP2Q14767 1821 aa10.09□□□□□ -0.79
CLDND1-214ENST00000507411 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-214ENST00000507411 COA7Q96BR5 231 aa10.08□□□□□ -0.8
CLDND1-214ENST00000507411 RNPC3Q96LT9 517 aaKnown RBP10.08□□□□□ -0.8
CLDND1-214ENST00000507411 FBXL18Q96ME1 805 aa10.08□□□□□ -0.8
CLDND1-214ENST00000507411 THUMPD2Q9BTF0 503 aaKnown RBP10.08□□□□□ -0.8
CLDND1-214ENST00000507411 KCNH4Q9UQ05 1017 aa10.08□□□□□ -0.8
CLDND1-214ENST00000507411 CHD8Q9HCK8 2581 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 MAST2Q6P0Q8 1798 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 U2SURPO15042 1029 aaKnown RBP10.07□□□□□ -0.8
CLDND1-214ENST00000507411 CYP2C8P10632 490 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 IGFBP4P22692 258 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 KCNQ1P51787 676 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 TFF2Q03403 129 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 CFAP100Q494V2 611 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 FAM89AQ96GI7 184 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 PRMT6Q96LA8 375 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-214ENST00000507411 TMEM121BQ9BXQ6 578 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-214ENST00000507411 KCNH6Q9H252 994 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 PRDM12Q9H4Q4 367 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 SEC31BQ9NQW1 1179 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 MIS18AQ9NYP9 233 aa10.07□□□□□ -0.8
CLDND1-214ENST00000507411 RBM5P52756 815 aaKnown RBP eCLIP10.06□□□□□ -0.8
CLDND1-214ENST00000507411 GTF2IP78347 998 aa10.06□□□□□ -0.8
CLDND1-214ENST00000507411 TRIM32Q13049 653 aa10.06□□□□□ -0.8
CLDND1-214ENST00000507411 TAF7Q15545 349 aaPredicted RBP10.06□□□□□ -0.8
CLDND1-214ENST00000507411 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
CLDND1-214ENST00000507411 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.82e-6■■■□□ 15
CLDND1-214ENST00000507411 TIFAQ96CG3 184 aa10.06□□□□□ -0.8
CLDND1-214ENST00000507411 WRNIP1Q96S55 665 aa10.06□□□□□ -0.8
CLDND1-214ENST00000507411 EPG5Q9HCE0 2579 aa10.06□□□□□ -0.8
CLDND1-214ENST00000507411 AOX1Q06278 1338 aa10.06□□□□□ -0.8
CLDND1-214ENST00000507411 DOCK3Q8IZD9 2030 aa10.06□□□□□ -0.8
CLDND1-214ENST00000507411 F8W031 263 aaPredicted RBP10.05□□□□□ -0.8
CLDND1-214ENST00000507411 PPATQ06203 517 aa10.05□□□□□ -0.8
CLDND1-214ENST00000507411 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
CLDND1-214ENST00000507411 BADQ92934 168 aa10.05□□□□□ -0.8
CLDND1-214ENST00000507411 ZKSCAN4Q969J2 545 aaPredicted RBP10.05□□□□□ -0.8
CLDND1-214ENST00000507411 TEPSINQ96N21 525 aa10.05□□□□□ -0.8
CLDND1-214ENST00000507411 USP34Q70CQ2 3546 aa10.05□□□□□ -0.8
CLDND1-214ENST00000507411 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-214ENST00000507411 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-214ENST00000507411 PI4K2BG5E9Z4 385 aa10.04□□□□□ -0.8
CLDND1-214ENST00000507411 IRS4O14654 1257 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms