RNA–Protein interactions for RNA: ENST00000507223.1

HMGCLL1-207, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 3

Gene HMGCLL1, Length 512 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-207ENST00000507223 FAAP100Q0VG06 881 aa7.04□□□□□ -1.28
HMGCLL1-207ENST00000507223 SETDB2Q96T68 719 aa7.04□□□□□ -1.28
HMGCLL1-207ENST00000507223 KRTAP4-2Q9BYR5 136 aa7.04□□□□□ -1.28
HMGCLL1-207ENST00000507223 EHD4Q9H223 541 aa7.04□□□□□ -1.28
HMGCLL1-207ENST00000507223 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
HMGCLL1-207ENST00000507223 PRNPP04156 253 aa7.03□□□□□ -1.28
HMGCLL1-207ENST00000507223 COL19A1Q14993 1142 aa7.03□□□□□ -1.28
HMGCLL1-207ENST00000507223 TP53INP2Q8IXH6 220 aa7.03□□□□□ -1.28
HMGCLL1-207ENST00000507223 SHISA5Q8N114 240 aa7.03□□□□□ -1.28
HMGCLL1-207ENST00000507223 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
HMGCLL1-207ENST00000507223 OSBPL1AQ9BXW6 950 aa7.03□□□□□ -1.28
HMGCLL1-207ENST00000507223 SUGCTQ9HAC7 445 aa7.03□□□□□ -1.28
HMGCLL1-207ENST00000507223 PNMA6FA0A0J9YX94 578 aa7.02□□□□□ -1.29
HMGCLL1-207ENST00000507223 ITGB5P18084 799 aa7.02□□□□□ -1.29
HMGCLL1-207ENST00000507223 RPS26P11Q5JNZ5 115 aaPredicted RBP7.02□□□□□ -1.29
HMGCLL1-207ENST00000507223 C3orf58Q8NDZ4 430 aa7.02□□□□□ -1.29
HMGCLL1-207ENST00000507223 FBXL18Q96ME1 805 aa7.02□□□□□ -1.29
HMGCLL1-207ENST00000507223 BAZ1BQ9UIG0 1483 aaKnown RBP7.02□□□□□ -1.29
HMGCLL1-207ENST00000507223 WIZO95785 1651 aa7.01□□□□□ -1.29
HMGCLL1-207ENST00000507223 RXRBP28702 533 aa7.01□□□□□ -1.29
HMGCLL1-207ENST00000507223 PLCB3Q01970 1234 aa7.01□□□□□ -1.29
HMGCLL1-207ENST00000507223 LCE4AQ5TA78 99 aa7.01□□□□□ -1.29
HMGCLL1-207ENST00000507223 SND1Q7KZF4 910 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGCLL1-207ENST00000507223 VSIG10LQ86VR7 867 aa7.01□□□□□ -1.29
HMGCLL1-207ENST00000507223 SMG8Q8ND04 991 aaKnown RBP7.01□□□□□ -1.29
HMGCLL1-207ENST00000507223 RSF1Q96T23 1441 aaPredicted RBP7.01□□□□□ -1.29
HMGCLL1-207ENST00000507223 PATL2C9JE40 543 aaKnown RBP7□□□□□ -1.29
HMGCLL1-207ENST00000507223 ECEL1O95672 775 aa7□□□□□ -1.29
HMGCLL1-207ENST00000507223 P4HBP07237 508 aaKnown RBP7□□□□□ -1.29
HMGCLL1-207ENST00000507223 ARL4DP49703 201 aa7□□□□□ -1.29
HMGCLL1-207ENST00000507223 CPSF6Q16630 551 aaKnown RBP eCLIP7□□□□□ -1.29
HMGCLL1-207ENST00000507223 C12orf50Q8NA57 414 aaPredicted RBP7□□□□□ -1.29
HMGCLL1-207ENST00000507223 BCO2Q9BYV7 579 aa7□□□□□ -1.29
HMGCLL1-207ENST00000507223 WWC3Q9ULE0 1092 aa7□□□□□ -1.29
HMGCLL1-207ENST00000507223 JUNBP17275 347 aaPredicted RBP6.99□□□□□ -1.29
HMGCLL1-207ENST00000507223 GSTM4Q03013 218 aa6.99□□□□□ -1.29
HMGCLL1-207ENST00000507223 NFKBIBQ15653 356 aa6.99□□□□□ -1.29
HMGCLL1-207ENST00000507223 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.99□□□□□ -1.29
HMGCLL1-207ENST00000507223 NUTM2GQ5VZR2 741 aa6.99□□□□□ -1.29
HMGCLL1-207ENST00000507223 DNAJC14Q6Y2X3 702 aaPredicted RBP6.99□□□□□ -1.29
HMGCLL1-207ENST00000507223 FBF1Q8TES7 1133 aa6.99□□□□□ -1.29
HMGCLL1-207ENST00000507223 TRAK1Q9UPV9 953 aa6.99□□□□□ -1.29
HMGCLL1-207ENST00000507223 FAM95CA0A1B0GW59 222 aa6.98□□□□□ -1.29
HMGCLL1-207ENST00000507223 CYP26A1O43174 497 aa6.98□□□□□ -1.29
HMGCLL1-207ENST00000507223 GADD45BO75293 160 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-207ENST00000507223 ZSCAN29Q8IWY8 852 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-207ENST00000507223 METTL22Q9BUU2 404 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-207ENST00000507223 USP26Q9BXU7 913 aa6.98□□□□□ -1.29
HMGCLL1-207ENST00000507223 OSBPL7Q9BZF2 842 aa6.98□□□□□ -1.29
HMGCLL1-207ENST00000507223 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-207ENST00000507223 MAOBP27338 520 aa6.97□□□□□ -1.29
HMGCLL1-207ENST00000507223 ADMP35318 185 aa6.97□□□□□ -1.29
HMGCLL1-207ENST00000507223 EXOSC6Q5RKV6 272 aaKnown RBP6.97□□□□□ -1.29
HMGCLL1-207ENST00000507223 NXPE4Q6UWF7 544 aa6.97□□□□□ -1.29
HMGCLL1-207ENST00000507223 PDZD3Q86UT5 571 aa6.97□□□□□ -1.29
HMGCLL1-207ENST00000507223 C2CD4AQ8NCU7 369 aaPredicted RBP6.97□□□□□ -1.29
HMGCLL1-207ENST00000507223 ANKRD24Q8TF21 1146 aa6.97□□□□□ -1.29
HMGCLL1-207ENST00000507223 GSX1Q9H4S2 264 aaPredicted RBP6.97□□□□□ -1.29
HMGCLL1-207ENST00000507223 LAMC3Q9Y6N6 1575 aa6.96□□□□□ -1.29
HMGCLL1-207ENST00000507223 EIF4EBP3O60516 100 aaPredicted RBP6.96□□□□□ -1.3
HMGCLL1-207ENST00000507223 PDIA4P13667 645 aaKnown RBP6.96□□□□□ -1.3
HMGCLL1-207ENST00000507223 CDPF1Q6NVV7 123 aa6.96□□□□□ -1.3
HMGCLL1-207ENST00000507223 PAOXQ6QHF9 649 aa6.96□□□□□ -1.3
HMGCLL1-207ENST00000507223 CACNA2D2Q9NY47 1150 aa6.96□□□□□ -1.3
HMGCLL1-207ENST00000507223 SYNGAP1Q96PV0 1343 aa6.96□□□□□ -1.3
HMGCLL1-207ENST00000507223 TOP2AP11388 1531 aaKnown RBP6.96□□□□□ -1.3
HMGCLL1-207ENST00000507223 XRCC5P13010 732 aaKnown RBP6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 DRD2P14416 443 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 FCGRTP55899 365 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 POU4F3Q15319 338 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 NPAS4Q8IUM7 802 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 FLCNQ8NFG4 579 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 STK35Q8TDR2 534 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 FBLIM1Q8WUP2 373 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 TBC1D32Q96NH3 1257 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 PAK6Q9NQU5 681 aaPredicted RBP6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 PCDHGC5Q9Y5F6 944 aa6.95□□□□□ -1.3
HMGCLL1-207ENST00000507223 CYP11A1P05108 521 aa6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 ADH5P11766 374 aa6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 MAPK8P45983 427 aa6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 USP11P51784 963 aa6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 SOX4Q06945 474 aaPredicted RBP6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 AP3B2Q13367 1082 aa6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 ZAR1Q86SH2 424 aa6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 AGBL5Q8NDL9 886 aa6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 RNF19AQ9NV58 838 aa6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 NLRP2Q9NX02 1062 aa6.94□□□□□ -1.3
HMGCLL1-207ENST00000507223 FAM170BA6NMN3 283 aa6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 PAPLNO95428 1278 aa6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 ZNF648Q5T619 568 aaPredicted RBP6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 ALG1LQ6GMV1 187 aa6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 EZH1Q92800 747 aaPredicted RBP6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 WDR18Q9BV38 432 aa6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 CCDC86Q9H6F5 360 aaKnown RBP6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 PRKAG2Q9UGJ0 569 aa6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 NESP48681 1621 aa6.93□□□□□ -1.3
HMGCLL1-207ENST00000507223 THOC2Q8NI27 1593 aaKnown RBP6.92□□□□□ -1.3
HMGCLL1-207ENST00000507223 ZNF862O60290 1169 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms