RNA–Protein interactions for RNA: ENST00000507223.1

HMGCLL1-207, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 3

Gene HMGCLL1, Length 512 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-207ENST00000507223 AEBP2Q6ZN18 517 aaPredicted RBP26.51■■□□□ 1.83
HMGCLL1-207ENST00000507223 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
HMGCLL1-207ENST00000507223 SENP3Q9H4L4 574 aaPredicted RBP22.61■■□□□ 1.21
HMGCLL1-207ENST00000507223 PHF23Q9BUL5 403 aaPredicted RBP22.3■■□□□ 1.16
HMGCLL1-207ENST00000507223 FOXD1Q16676 465 aa21.13■□□□□ 0.97
HMGCLL1-207ENST00000507223 MSH5O43196 834 aa19.84■□□□□ 0.77
HMGCLL1-207ENST00000507223 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
HMGCLL1-207ENST00000507223 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
HMGCLL1-207ENST00000507223 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
HMGCLL1-207ENST00000507223 PPP6R1Q9UPN7 881 aa19.59■□□□□ 0.73
HMGCLL1-207ENST00000507223 ADRA2BP18089 450 aa19.5■□□□□ 0.71
HMGCLL1-207ENST00000507223 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
HMGCLL1-207ENST00000507223 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
HMGCLL1-207ENST00000507223 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
HMGCLL1-207ENST00000507223 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
HMGCLL1-207ENST00000507223 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
HMGCLL1-207ENST00000507223 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
HMGCLL1-207ENST00000507223 HOXD11P31277 338 aaPredicted RBP17.14■□□□□ 0.33
HMGCLL1-207ENST00000507223 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
HMGCLL1-207ENST00000507223 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
HMGCLL1-207ENST00000507223 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
HMGCLL1-207ENST00000507223 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
HMGCLL1-207ENST00000507223 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
HMGCLL1-207ENST00000507223 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
HMGCLL1-207ENST00000507223 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
HMGCLL1-207ENST00000507223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
HMGCLL1-207ENST00000507223 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
HMGCLL1-207ENST00000507223 SPINK5Q9NQ38 1064 aaPredicted RBP15.83■□□□□ 0.12
HMGCLL1-207ENST00000507223 KCNA4P22459 653 aa15.81■□□□□ 0.12
HMGCLL1-207ENST00000507223 CAPN15O75808 1086 aa15.8■□□□□ 0.12
HMGCLL1-207ENST00000507223 DSG3P32926 999 aa15.78■□□□□ 0.12
HMGCLL1-207ENST00000507223 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
HMGCLL1-207ENST00000507223 TRHP20396 242 aaPredicted RBP15.5■□□□□ 0.07
HMGCLL1-207ENST00000507223 POTEHQ6S545 545 aa15.49■□□□□ 0.07
HMGCLL1-207ENST00000507223 APLP2Q06481 763 aa15.45■□□□□ 0.06
HMGCLL1-207ENST00000507223 ABCB7O75027 752 aa15.43■□□□□ 0.06
HMGCLL1-207ENST00000507223 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
HMGCLL1-207ENST00000507223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
HMGCLL1-207ENST00000507223 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
HMGCLL1-207ENST00000507223 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
HMGCLL1-207ENST00000507223 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
HMGCLL1-207ENST00000507223 POLA2Q14181 598 aa15.03■□□□□ -0
HMGCLL1-207ENST00000507223 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
HMGCLL1-207ENST00000507223 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
HMGCLL1-207ENST00000507223 CHRDL2Q6WN34 429 aa14.82□□□□□ -0.04
HMGCLL1-207ENST00000507223 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
HMGCLL1-207ENST00000507223 ATF5Q9Y2D1 282 aaPredicted RBP14.81□□□□□ -0.04
HMGCLL1-207ENST00000507223 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
HMGCLL1-207ENST00000507223 AKT1S1Q96B36 256 aa14.63□□□□□ -0.07
HMGCLL1-207ENST00000507223 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
HMGCLL1-207ENST00000507223 ZBTB22O15209 634 aa14.54□□□□□ -0.08
HMGCLL1-207ENST00000507223 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
HMGCLL1-207ENST00000507223 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
HMGCLL1-207ENST00000507223 SP7Q8TDD2 431 aaPredicted RBP14.39□□□□□ -0.11
HMGCLL1-207ENST00000507223 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
HMGCLL1-207ENST00000507223 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
HMGCLL1-207ENST00000507223 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.12
HMGCLL1-207ENST00000507223 HAX1O00165 279 aa14.23□□□□□ -0.13
HMGCLL1-207ENST00000507223 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
HMGCLL1-207ENST00000507223 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
HMGCLL1-207ENST00000507223 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
HMGCLL1-207ENST00000507223 FBLN2P98095 1184 aa14.19□□□□□ -0.14
HMGCLL1-207ENST00000507223 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
HMGCLL1-207ENST00000507223 EVX2Q03828 476 aa14.06□□□□□ -0.16
HMGCLL1-207ENST00000507223 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
HMGCLL1-207ENST00000507223 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
HMGCLL1-207ENST00000507223 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
HMGCLL1-207ENST00000507223 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
HMGCLL1-207ENST00000507223 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
HMGCLL1-207ENST00000507223 SSUH2Q9Y2M2 353 aa13.99□□□□□ -0.17
HMGCLL1-207ENST00000507223 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
HMGCLL1-207ENST00000507223 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
HMGCLL1-207ENST00000507223 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
HMGCLL1-207ENST00000507223 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
HMGCLL1-207ENST00000507223 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
HMGCLL1-207ENST00000507223 GABBR2O75899 941 aa13.71□□□□□ -0.21
HMGCLL1-207ENST00000507223 FARP1Q9Y4F1 1045 aaPredicted RBP13.55□□□□□ -0.24
HMGCLL1-207ENST00000507223 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
HMGCLL1-207ENST00000507223 LHX8Q68G74 356 aa13.5□□□□□ -0.25
HMGCLL1-207ENST00000507223 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
HMGCLL1-207ENST00000507223 CLCN6P51797 869 aa13.36□□□□□ -0.27
HMGCLL1-207ENST00000507223 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
HMGCLL1-207ENST00000507223 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
HMGCLL1-207ENST00000507223 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
HMGCLL1-207ENST00000507223 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
HMGCLL1-207ENST00000507223 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
HMGCLL1-207ENST00000507223 DCBLD2Q96PD2 775 aa13.28□□□□□ -0.28
HMGCLL1-207ENST00000507223 GALR2O43603 387 aaPredicted RBP13.18□□□□□ -0.3
HMGCLL1-207ENST00000507223 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
HMGCLL1-207ENST00000507223 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
HMGCLL1-207ENST00000507223 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
HMGCLL1-207ENST00000507223 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
HMGCLL1-207ENST00000507223 POTEB2H3BUK9 544 aa13□□□□□ -0.33
HMGCLL1-207ENST00000507223 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
HMGCLL1-207ENST00000507223 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
HMGCLL1-207ENST00000507223 PROM2Q8N271 834 aa12.92□□□□□ -0.34
HMGCLL1-207ENST00000507223 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
HMGCLL1-207ENST00000507223 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
HMGCLL1-207ENST00000507223 TSPYL2Q9H2G4 693 aaPredicted RBP12.87□□□□□ -0.35
HMGCLL1-207ENST00000507223 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms