RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 EML3Q32P44 896 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 TRMT2AQ8IZ69 625 aaKnown RBP12.09□□□□□ -0.47
CLCN3-205ENST00000506924 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
CLCN3-205ENST00000506924 UTP14AQ9BVJ6 771 aaKnown RBP12.09□□□□□ -0.47
CLCN3-205ENST00000506924 NYXQ9GZU5 481 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 PIM2Q9P1W9 311 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 ANKRD36CQ5JPF3 1778 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 ADCY9O60503 1353 aa12.08□□□□□ -0.48
CLCN3-205ENST00000506924 USP17L3A6NCW0 530 aa12.08□□□□□ -0.48
CLCN3-205ENST00000506924 USP17L4A6NCW7 530 aa12.08□□□□□ -0.48
CLCN3-205ENST00000506924 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
CLCN3-205ENST00000506924 FKBP5Q13451 457 aaPredicted RBP12.08□□□□□ -0.48
CLCN3-205ENST00000506924 CC2D2BQ6DHV5 1058 aa12.08□□□□□ -0.48
CLCN3-205ENST00000506924 USP17L2Q6R6M4 530 aa12.08□□□□□ -0.48
CLCN3-205ENST00000506924 KSR2Q6VAB6 950 aa12.08□□□□□ -0.48
CLCN3-205ENST00000506924 USP17L1Q7RTZ2 530 aa12.08□□□□□ -0.48
CLCN3-205ENST00000506924 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
CLCN3-205ENST00000506924 TRMT112Q9UI30 125 aaKnown RBP12.08□□□□□ -0.48
CLCN3-205ENST00000506924 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.48
CLCN3-205ENST00000506924 UTRNP46939 3433 aa12.08□□□□□ -0.48
CLCN3-205ENST00000506924 TNRC6CQ9HCJ0 1690 aaKnown RBP12.07□□□□□ -0.48
CLCN3-205ENST00000506924 F6X3S4 739 aa12.07□□□□□ -0.48
CLCN3-205ENST00000506924 BRCA1P38398 1863 aaKnown RBP12.07□□□□□ -0.48
CLCN3-205ENST00000506924 CTC1Q2NKJ3 1217 aa12.07□□□□□ -0.48
CLCN3-205ENST00000506924 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
CLCN3-205ENST00000506924 FAM89AQ96GI7 184 aa12.07□□□□□ -0.48
CLCN3-205ENST00000506924 METTL22Q9BUU2 404 aaPredicted RBP12.07□□□□□ -0.48
CLCN3-205ENST00000506924 FAM187AA6NFU0 413 aa12.06□□□□□ -0.48
CLCN3-205ENST00000506924 MYCP01106 439 aaPredicted RBP12.06□□□□□ -0.48
CLCN3-205ENST00000506924 SRGNP10124 158 aa12.06□□□□□ -0.48
CLCN3-205ENST00000506924 SMCPP49901 116 aaPredicted RBP12.06□□□□□ -0.48
CLCN3-205ENST00000506924 RAB15P59190 212 aa12.06□□□□□ -0.48
CLCN3-205ENST00000506924 NCOA4Q13772 614 aa12.06□□□□□ -0.48
CLCN3-205ENST00000506924 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
CLCN3-205ENST00000506924 ARHGAP27Q6ZUM4 889 aa12.06□□□□□ -0.48
CLCN3-205ENST00000506924 TTLL6Q8N841 843 aa12.06□□□□□ -0.48
CLCN3-205ENST00000506924 SSH1Q8WYL5 1049 aa12.06□□□□□ -0.48
CLCN3-205ENST00000506924 IRX2Q9BZI1 471 aaPredicted RBP12.06□□□□□ -0.48
CLCN3-205ENST00000506924 CACNA1SQ13698 1873 aa12.06□□□□□ -0.48
CLCN3-205ENST00000506924 GRIN3BO60391 1043 aa12.05□□□□□ -0.48
CLCN3-205ENST00000506924 IGKV5-2P06315 115 aa12.05□□□□□ -0.48
CLCN3-205ENST00000506924 TIMP2P16035 220 aa12.05□□□□□ -0.48
CLCN3-205ENST00000506924 LMOD1P29536 600 aaPredicted RBP12.05□□□□□ -0.48
CLCN3-205ENST00000506924 WDR4P57081 412 aaKnown RBP12.05□□□□□ -0.48
CLCN3-205ENST00000506924 TRIM50Q86XT4 487 aa12.05□□□□□ -0.48
CLCN3-205ENST00000506924 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
CLCN3-205ENST00000506924 HPS1Q92902 700 aa12.05□□□□□ -0.48
CLCN3-205ENST00000506924 MASTLQ96GX5 879 aa12.05□□□□□ -0.48
CLCN3-205ENST00000506924 NOD1Q9Y239 953 aa12.05□□□□□ -0.48
CLCN3-205ENST00000506924 SH3TC1Q8TE82 1336 aa12.05□□□□□ -0.48
CLCN3-205ENST00000506924 DLEC1Q9Y238 1755 aa12.05□□□□□ -0.48
CLCN3-205ENST00000506924 C21orf2O43822 256 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 LILRA1O75019 489 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 NPR1P16066 1061 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 NEXNQ0ZGT2 675 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 PKDCCQ504Y2 493 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 Q6ZVU0 165 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 CRIPAKQ8N1N5 446 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 DNAAF4Q8WXU2 420 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 NLRP3Q96P20 1036 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 SMC4Q9NTJ3 1288 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 CWC25Q9NXE8 425 aaPredicted RBP12.04□□□□□ -0.48
CLCN3-205ENST00000506924 ZBED9Q6R2W3 1325 aa12.04□□□□□ -0.48
CLCN3-205ENST00000506924 IBTKQ9P2D0 1353 aaPredicted RBP12.04□□□□□ -0.48
CLCN3-205ENST00000506924 CACNA1FO60840 1977 aa12.03□□□□□ -0.48
CLCN3-205ENST00000506924 SLX4Q8IY92 1834 aa12.03□□□□□ -0.48
CLCN3-205ENST00000506924 KLRG2A4D1S0 409 aaPredicted RBP12.03□□□□□ -0.48
CLCN3-205ENST00000506924 ZIC2O95409 532 aaPredicted RBP12.03□□□□□ -0.48
CLCN3-205ENST00000506924 TRIM28Q13263 835 aaKnown RBP12.03□□□□□ -0.48
CLCN3-205ENST00000506924 TSGA10IPQ3SY00 556 aa12.03□□□□□ -0.48
CLCN3-205ENST00000506924 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
CLCN3-205ENST00000506924 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
CLCN3-205ENST00000506924 SLC4A10Q6U841 1118 aa12.03□□□□□ -0.48
CLCN3-205ENST00000506924 OLFM4Q6UX06 510 aa12.03□□□□□ -0.48
CLCN3-205ENST00000506924 SLC51AQ86UW1 340 aa12.03□□□□□ -0.48
CLCN3-205ENST00000506924 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
CLCN3-205ENST00000506924 ITPKCQ96DU7 683 aa12.03□□□□□ -0.48
CLCN3-205ENST00000506924 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
CLCN3-205ENST00000506924 TMPRSS4Q9NRS4 437 aa12.03□□□□□ -0.48
CLCN3-205ENST00000506924 NEURL1BA8MQ27 555 aa12.02□□□□□ -0.49
CLCN3-205ENST00000506924 IRS4O14654 1257 aaPredicted RBP12.02□□□□□ -0.49
CLCN3-205ENST00000506924 YY1P25490 414 aa12.02□□□□□ -0.49
CLCN3-205ENST00000506924 ATP1A2P50993 1020 aa12.02□□□□□ -0.49
CLCN3-205ENST00000506924 OXLD1Q5BKU9 147 aa12.02□□□□□ -0.49
CLCN3-205ENST00000506924 ZBTB38Q8NAP3 1195 aaPredicted RBP12.02□□□□□ -0.49
CLCN3-205ENST00000506924 CCDC191Q8NCU4 936 aa12.02□□□□□ -0.49
CLCN3-205ENST00000506924 CNKSR1Q969H4 720 aa12.02□□□□□ -0.49
CLCN3-205ENST00000506924 PBXIP1Q96AQ6 731 aa12.02□□□□□ -0.49
CLCN3-205ENST00000506924 ARFGEF1Q9Y6D6 1849 aa12.02□□□□□ -0.49
CLCN3-205ENST00000506924 DDX60Q8IY21 1712 aaKnown RBP12.01□□□□□ -0.49
CLCN3-205ENST00000506924 LAMB2P55268 1798 aa12.01□□□□□ -0.49
CLCN3-205ENST00000506924 RASSF7Q02833 373 aa12.01□□□□□ -0.49
CLCN3-205ENST00000506924 CRY2Q49AN0 593 aa12.01□□□□□ -0.49
CLCN3-205ENST00000506924 CYP2U1Q7Z449 544 aa12.01□□□□□ -0.49
CLCN3-205ENST00000506924 RBM17Q96I25 401 aaKnown RBP12.01□□□□□ -0.49
CLCN3-205ENST00000506924 VRTNQ9H8Y1 702 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms