RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 KIF3AQ9Y496 699 aa13.52□□□□□ -0.24
ITGA3-208ENST00000506437 SGSM2O43147 1006 aa13.52□□□□□ -0.25
ITGA3-208ENST00000506437 PDE6AP16499 860 aa13.52□□□□□ -0.25
ITGA3-208ENST00000506437 MFSD14BQ5SR56 506 aa13.52□□□□□ -0.25
ITGA3-208ENST00000506437 TIGD1Q96MW7 591 aa13.52□□□□□ -0.25
ITGA3-208ENST00000506437 ARMT1Q9H993 441 aa13.52□□□□□ -0.25
ITGA3-208ENST00000506437 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
ITGA3-208ENST00000506437 MYH13Q9UKX3 1938 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 DUOX1Q9NRD9 1551 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 HAND2P61296 217 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 EVX2Q03828 476 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 GBP4Q96PP9 640 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 MAST3O60307 1309 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 RNF113AO15541 343 aaKnown RBP13.51□□□□□ -0.25
ITGA3-208ENST00000506437 SLFN14P0C7P3 912 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 HS1BP3Q53T59 392 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 KIAA0825Q8IV33 1275 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 LARGE2Q8N3Y3 721 aa13.51□□□□□ -0.25
ITGA3-208ENST00000506437 CYP7A1P22680 504 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 PRELPP51888 382 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 MECOMQ03112 1051 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 TCEANC2Q96MN5 208 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 USP26Q9BXU7 913 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 AATFQ9NY61 560 aaKnown RBP eCLIP13.5□□□□□ -0.25
ITGA3-208ENST00000506437 ECE2O60344 883 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 PTMAP06454 111 aaKnown RBP13.5□□□□□ -0.25
ITGA3-208ENST00000506437 ARHGAP27Q6ZUM4 889 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 CERS5Q8N5B7 392 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 SDR42E1Q8WUS8 393 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 INCENPQ9NQS7 918 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 YDJCA8MPS7 323 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 TGFB2P61812 414 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 SLC20A2Q08357 652 aa13.5□□□□□ -0.25
ITGA3-208ENST00000506437 TDRD7Q8NHU6 1098 aaKnown RBP13.5□□□□□ -0.25
ITGA3-208ENST00000506437 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
ITGA3-208ENST00000506437 CCDC93Q567U6 631 aa13.49□□□□□ -0.25
ITGA3-208ENST00000506437 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
ITGA3-208ENST00000506437 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
ITGA3-208ENST00000506437 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
ITGA3-208ENST00000506437 DENND2AQ9ULE3 1009 aa13.49□□□□□ -0.25
ITGA3-208ENST00000506437 SCN9AQ15858 1988 aa13.49□□□□□ -0.25
ITGA3-208ENST00000506437 SHTN1A0MZ66 631 aa13.49□□□□□ -0.25
ITGA3-208ENST00000506437 NFKBIEO00221 500 aa13.49□□□□□ -0.25
ITGA3-208ENST00000506437 MBD4O95243 580 aa13.49□□□□□ -0.25
ITGA3-208ENST00000506437 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
ITGA3-208ENST00000506437 LCORLQ8N3X6 602 aa13.49□□□□□ -0.25
ITGA3-208ENST00000506437 GPAA1O43292 621 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 ADD2P35612 726 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 DZIP1Q86YF9 867 aaKnown RBP13.48□□□□□ -0.25
ITGA3-208ENST00000506437 COL4A5P29400 1685 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 SLURP2P0DP57 97 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 YBX3P16989 372 aaKnown RBP eCLIP13.48□□□□□ -0.25
ITGA3-208ENST00000506437 KIAA2012Q0VF49 1180 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 MCMDC2Q4G0Z9 681 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 LSG1Q9H089 658 aaKnown RBP13.48□□□□□ -0.25
ITGA3-208ENST00000506437 CD2APQ9Y5K6 639 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 MMP14P50281 582 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 CACNB3P54284 484 aa13.48□□□□□ -0.25
ITGA3-208ENST00000506437 NAA16Q6N069 864 aaPredicted RBP13.48□□□□□ -0.25
ITGA3-208ENST00000506437 CYP2D7A0A087X1C5 515 aa13.47□□□□□ -0.25
ITGA3-208ENST00000506437 CD2BP2O95400 341 aaKnown RBP13.47□□□□□ -0.25
ITGA3-208ENST00000506437 ZSCAN23Q3MJ62 389 aa13.47□□□□□ -0.25
ITGA3-208ENST00000506437 ZMYM1Q5SVZ6 1142 aa13.47□□□□□ -0.25
ITGA3-208ENST00000506437 AIDAQ96BJ3 306 aa13.47□□□□□ -0.25
ITGA3-208ENST00000506437 LDHBP07195 334 aaKnown RBP13.47□□□□□ -0.25
ITGA3-208ENST00000506437 DDIT3P35638 169 aa13.47□□□□□ -0.25
ITGA3-208ENST00000506437 NSUN4Q96CB9 384 aaKnown RBP13.47□□□□□ -0.25
ITGA3-208ENST00000506437 RBM8AQ9Y5S9 174 aaKnown RBP13.47□□□□□ -0.25
ITGA3-208ENST00000506437 TCRBV5S4A2TA0A5A2 114 aa13.46□□□□□ -0.25
ITGA3-208ENST00000506437 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
ITGA3-208ENST00000506437 FAM193AP78312 1265 aa13.46□□□□□ -0.25
ITGA3-208ENST00000506437 RAB3GAP1Q15042 981 aa13.46□□□□□ -0.25
ITGA3-208ENST00000506437 ADCK5Q3MIX3 580 aa13.46□□□□□ -0.25
ITGA3-208ENST00000506437 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.25
ITGA3-208ENST00000506437 MED23Q9ULK4 1368 aa13.46□□□□□ -0.25
ITGA3-208ENST00000506437 FOXP2O15409 715 aa13.46□□□□□ -0.25
ITGA3-208ENST00000506437 REC8O95072 547 aa13.46□□□□□ -0.25
ITGA3-208ENST00000506437 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
ITGA3-208ENST00000506437 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.46□□□□□ -0.25
ITGA3-208ENST00000506437 TAOK3Q9H2K8 898 aa13.46□□□□□ -0.25
ITGA3-208ENST00000506437 HSPD1P10809 573 aaKnown RBP13.45□□□□□ -0.26
ITGA3-208ENST00000506437 TTF1Q15361 905 aaPredicted RBP13.45□□□□□ -0.26
ITGA3-208ENST00000506437 NKX2-3Q8TAU0 364 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 CHAMP1Q96JM3 812 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 ZNF512BQ96KM6 892 aaPredicted RBP13.45□□□□□ -0.26
ITGA3-208ENST00000506437 KIF2CQ99661 725 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 TTF2Q9UNY4 1162 aaKnown RBP13.45□□□□□ -0.26
ITGA3-208ENST00000506437 CCDC171Q6TFL3 1326 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 ARAP2Q8WZ64 1704 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 TULP2O00295 520 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 IL1R1P14778 569 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 TMC4Q7Z404 712 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 RUFY2Q8WXA3 655 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 APPBP2Q92624 585 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 EYA3Q99504 573 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
ITGA3-208ENST00000506437 BCCIPQ9P287 314 aaKnown RBP eCLIP13.45□□□□□ -0.26
ITGA3-208ENST00000506437 CCDC39Q9UFE4 941 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms