RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TFE3P19532 575 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 IREB2P48200 963 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 RPS26P62854 115 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 NRG1Q02297 640 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 ZNF394Q53GI3 561 aa6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 NT5DC4Q86YG4 428 aa6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 WFDC12Q8WWY7 111 aa6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 WDR89Q96FK6 387 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 TMEM74Q96NL1 305 aa6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 AKTIPQ9H8T0 292 aa6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 RAD18Q9NS91 495 aa6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 IGSF5Q9NSI5 407 aa6.69□□□□□ -1.34
TOPBP1-204ENST00000505804 MEGF11A6BM72 1044 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 C1QTNF9BB2RNN3 333 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 ZNF862O60290 1169 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 PF4P02776 101 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 LMNB1P20700 586 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 NOS3P29474 1203 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 CHRNA4P43681 627 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 PTPN11Q06124 597 aaPredicted RBP6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 PWP1Q13610 501 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 MBTPS1Q14703 1052 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 NUTM2GQ5VZR2 741 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 CD163Q86VB7 1156 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 GPBAR1Q8TDU6 330 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 TMPRSS13Q9BYE2 586 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 RNF208Q9H0X6 261 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 PCDHGB7Q9Y5F8 929 aa6.68□□□□□ -1.34
TOPBP1-204ENST00000505804 AOC2O75106 756 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 TRIM37O94972 964 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 GDF11O95390 407 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 RACK1P63244 317 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 FAM160A1Q05DH4 1040 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 CAMK2GQ13555 558 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 SEPT6Q14141 434 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 ADGRE1Q14246 886 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 USP48Q86UV5 1035 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 JARID2Q92833 1246 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 ACSBG1Q96GR2 724 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 KRT82Q9NSB4 513 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 CACNA2D2Q9NY47 1150 aa6.67□□□□□ -1.34
TOPBP1-204ENST00000505804 DRD2P14416 443 aa6.66□□□□□ -1.34
TOPBP1-204ENST00000505804 GLB1P16278 677 aa6.66□□□□□ -1.34
TOPBP1-204ENST00000505804 AKAP4Q5JQC9 854 aa6.66□□□□□ -1.34
TOPBP1-204ENST00000505804 HP1BP3Q5SSJ5 553 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-204ENST00000505804 C12orf50Q8NA57 414 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-204ENST00000505804 RHOVQ96L33 236 aa6.66□□□□□ -1.34
TOPBP1-204ENST00000505804 WDR18Q9BV38 432 aa6.66□□□□□ -1.34
TOPBP1-204ENST00000505804 CYP4F12Q9HCS2 524 aa6.66□□□□□ -1.34
TOPBP1-204ENST00000505804 DDX41Q9UJV9 622 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-204ENST00000505804 SLFN14P0C7P3 912 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 EIF4A3P38919 411 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 LMNB2Q03252 620 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 FBXL19Q6PCT2 694 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 BNC2Q6ZN30 1099 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 TRIM42Q8IWZ5 723 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 TMEM151AQ8N4L1 468 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 GOLM1Q8NBJ4 401 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 SMG8Q8ND04 991 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 UBL7Q96S82 380 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 MIR1-1HGQ9H1L0 117 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 ADAMTS1Q9UHI8 967 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 PPP1R9AQ9ULJ8 1098 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 PCDHA4Q9UN74 947 aa6.65□□□□□ -1.34
TOPBP1-204ENST00000505804 GARTP22102 1010 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 ERCC5P28715 1186 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 CDK8P49336 464 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 SOX4Q06945 474 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 RAD51AP2Q09MP3 1159 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 KIF4BQ2VIQ3 1234 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 PLA2G4EQ3MJ16 856 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 SCARA3Q6AZY7 606 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 FDX2Q6P4F2 183 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 TXNRD3Q86VQ6 643 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 ZNF296Q8WUU4 475 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 GAL3ST3Q96A11 431 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 SUGCTQ9HAC7 445 aa6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-204ENST00000505804 TIAF1O95411 115 aa6.63□□□□□ -1.35
TOPBP1-204ENST00000505804 F13A1P00488 732 aa6.63□□□□□ -1.35
TOPBP1-204ENST00000505804 ITGB2P05107 769 aa6.63□□□□□ -1.35
TOPBP1-204ENST00000505804 INPP5AQ14642 412 aa6.63□□□□□ -1.35
TOPBP1-204ENST00000505804 SNAP47Q5SQN1 464 aa6.63□□□□□ -1.35
TOPBP1-204ENST00000505804 ANKRD34AQ69YU3 496 aa6.63□□□□□ -1.35
TOPBP1-204ENST00000505804 ZNF654Q8IZM8 581 aa6.63□□□□□ -1.35
TOPBP1-204ENST00000505804 MEGF10Q96KG7 1140 aa6.63□□□□□ -1.35
TOPBP1-204ENST00000505804 CSADQ9Y600 493 aa6.63□□□□□ -1.35
TOPBP1-204ENST00000505804 DCDC2CA8MYV0 355 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 SART1O43290 800 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 ADH5P11766 374 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 GATA4P43694 442 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 PREPP48147 710 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 HNRNPUQ00839 825 aaKnown RBP eCLIP6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 ZC3H12AQ5D1E8 599 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 Q6ZS46 218 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 DYMQ7RTS9 669 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 CCDC84Q86UT8 332 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 C12orf40Q86WS4 652 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 DZIP1LQ8IYY4 767 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms