RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 LEO1Q8WVC0 666 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 UBR3Q6ZT12 1888 aa20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 ST5P78524 1137 aa20.21■□□□□ 0.83
TRAPPC11-204ENST00000505676 UVSSAQ2YD98 709 aa20.21■□□□□ 0.83
TRAPPC11-204ENST00000505676 KRT27Q7Z3Y8 459 aa20.21■□□□□ 0.83
TRAPPC11-204ENST00000505676 ABCF2Q9UG63 623 aa20.21■□□□□ 0.83
TRAPPC11-204ENST00000505676 COL1A1P02452 1464 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC11-204ENST00000505676 FAM182BQ5T319 152 aa20.21■□□□□ 0.83
TRAPPC11-204ENST00000505676 SYNE3Q6ZMZ3 975 aa20.21■□□□□ 0.83
TRAPPC11-204ENST00000505676 DDX19AQ9NUU7 478 aaKnown RBP20.21■□□□□ 0.83
TRAPPC11-204ENST00000505676 CHD4Q14839 1912 aa20.2■□□□□ 0.82
TRAPPC11-204ENST00000505676 METAP2P50579 478 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRAPPC11-204ENST00000505676 PPP2R5BQ15173 497 aa20.2■□□□□ 0.82
TRAPPC11-204ENST00000505676 BRAPQ7Z569 592 aa20.2■□□□□ 0.82
TRAPPC11-204ENST00000505676 IGDCC4Q8TDY8 1250 aa20.2■□□□□ 0.82
TRAPPC11-204ENST00000505676 RBSNQ9H1K0 784 aa20.2■□□□□ 0.82
TRAPPC11-204ENST00000505676 NCOA5Q9HCD5 579 aaKnown RBP20.2■□□□□ 0.82
TRAPPC11-204ENST00000505676 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
TRAPPC11-204ENST00000505676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 B4E1Z4 1266 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 APOA5Q6Q788 366 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 CYB5R4Q7L1T6 521 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 NEDD4P46934 1319 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 ERICH2A1L162 156 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 TMEM67Q5HYA8 995 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 TRIM44Q96DX7 344 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 C8orf76Q96K31 380 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 RIOK1Q9BRS2 568 aaKnown RBP20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 LRRC4BQ9NT99 713 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 ORC3Q9UBD5 711 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 XDHP47989 1333 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 STK36Q9NRP7 1315 aa20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
TRAPPC11-204ENST00000505676 ZBTB43O43298 467 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 TMC4Q7Z404 712 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 CERS3Q8IU89 383 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 LY9Q9HBG7 655 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 MYH13Q9UKX3 1938 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 PPARAQ07869 468 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 CRY2Q49AN0 593 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 WDR66Q8TBY9 1149 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 WASF1Q92558 559 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 RCOR1Q9UKL0 485 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 IRS2Q9Y4H2 1338 aa20.18■□□□□ 0.82
TRAPPC11-204ENST00000505676 KIAA1551Q9HCM1 1747 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 MYH15Q9Y2K3 1946 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 CCDC196A0A1B0GTZ2 297 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 CCDC69A6NI79 296 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 FDPSP14324 419 aaKnown RBP20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 NFXL1Q6ZNB6 911 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 AMIGO3Q86WK7 504 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 FBXO18Q8NFZ0 1043 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 ESR2Q92731 530 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 RPGRQ92834 1020 aaKnown RBP20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 IFIT3O14879 490 aaKnown RBP20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 HS1BP3Q53T59 392 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 SLC12A7Q9Y666 1083 aa20.17■□□□□ 0.82
TRAPPC11-204ENST00000505676 GYS1P13807 737 aa20.16■□□□□ 0.82
TRAPPC11-204ENST00000505676 PRR5LQ6MZQ0 368 aa20.16■□□□□ 0.82
TRAPPC11-204ENST00000505676 MIGA1Q8NAN2 632 aa20.16■□□□□ 0.82
TRAPPC11-204ENST00000505676 NSUN4Q96CB9 384 aaKnown RBP20.16■□□□□ 0.82
TRAPPC11-204ENST00000505676 RBM17Q96I25 401 aaKnown RBP20.16■□□□□ 0.82
TRAPPC11-204ENST00000505676 GPHNQ9NQX3 736 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC11-204ENST00000505676 ZSWIM5Q9P217 1185 aa20.16■□□□□ 0.82
TRAPPC11-204ENST00000505676 KDM4AO75164 1064 aa20.15■□□□□ 0.82
TRAPPC11-204ENST00000505676 AEBP2Q6ZN18 517 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC11-204ENST00000505676 SMIM5Q71RC9 77 aa20.15■□□□□ 0.82
TRAPPC11-204ENST00000505676 ZNF804AQ7Z570 1209 aa20.15■□□□□ 0.82
TRAPPC11-204ENST00000505676 CRNKL1Q9BZJ0 848 aaKnown RBP20.15■□□□□ 0.82
TRAPPC11-204ENST00000505676 ATP8A2Q9NTI2 1148 aa20.15■□□□□ 0.82
TRAPPC11-204ENST00000505676 TAF1P21675 1872 aa20.15■□□□□ 0.82
TRAPPC11-204ENST00000505676 NUP62CLQ9H1M0 184 aa20.15■□□□□ 0.82
TRAPPC11-204ENST00000505676 IQSEC3Q9UPP2 1182 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC11-204ENST00000505676 GOLGA8AA7E2F4 631 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 PRKAB2O43741 272 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 BBOX1O75936 387 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 FGRP09769 529 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 ATP2B4P23634 1241 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 ADD1P35611 737 aaKnown RBP20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 GSTO1P78417 241 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 CTDSPL2Q05D32 466 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 WTAPQ15007 396 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 SLC3A2P08195 630 aaKnown RBP20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 PDLIM2Q96JY6 352 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 ANKIB1Q9P2G1 1089 aa20.14■□□□□ 0.81
TRAPPC11-204ENST00000505676 SERPINB2P05120 415 aa20.13■□□□□ 0.81
TRAPPC11-204ENST00000505676 CCDC192P0DO97 292 aa20.13■□□□□ 0.81
TRAPPC11-204ENST00000505676 HOXA10P31260 410 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC11-204ENST00000505676 MAP3K11Q16584 847 aa20.13■□□□□ 0.81
TRAPPC11-204ENST00000505676 ZNF772Q68DY9 489 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC11-204ENST00000505676 FAM173BQ6P4H8 233 aa20.13■□□□□ 0.81
TRAPPC11-204ENST00000505676 UBAC1Q9BSL1 405 aa20.13■□□□□ 0.81
TRAPPC11-204ENST00000505676 RTEL1Q9NZ71 1219 aa20.13■□□□□ 0.81
TRAPPC11-204ENST00000505676 TFIP11Q9UBB9 837 aaKnown RBP20.13■□□□□ 0.81
TRAPPC11-204ENST00000505676 CTAGE5O15320 804 aa20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 YEATS4O95619 227 aa20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 MECOMQ03112 1051 aa20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 ADGRA1Q86SQ6 560 aa20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 CRAMP1Q96RY5 1269 aa20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 ARPP21Q9UBL0 812 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms