RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 HOMER2Q9NSB8 354 aa18.81■□□□□ 0.6
ITGA3-204ENST00000505306 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
ITGA3-204ENST00000505306 NAP1L4Q99733 375 aaKnown RBP18.81■□□□□ 0.6
ITGA3-204ENST00000505306 GOPCQ9HD26 462 aa18.81■□□□□ 0.6
ITGA3-204ENST00000505306 MBD5Q9P267 1494 aa18.81■□□□□ 0.6
ITGA3-204ENST00000505306 DCAF15Q66K64 600 aa18.81■□□□□ 0.6
ITGA3-204ENST00000505306 SPAG5Q96R06 1193 aa18.81■□□□□ 0.6
ITGA3-204ENST00000505306 SCNN1DP51172 638 aa18.81■□□□□ 0.6
ITGA3-204ENST00000505306 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
ITGA3-204ENST00000505306 FAM193AP78312 1265 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 GINS2Q9Y248 185 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 PAXBP1Q9Y5B6 917 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 SAMD9LQ8IVG5 1584 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 TCP10L2B9ZVM9 353 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 ZSCAN12O43309 604 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 KIF22Q14807 665 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 LETM2Q2VYF4 491 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 GIMAP6Q6P9H5 292 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 GTPBP4Q9BZE4 634 aaKnown RBP18.8■□□□□ 0.6
ITGA3-204ENST00000505306 AS3MTQ9HBK9 375 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 ERVK-7P63135 1459 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 GYG1P46976 350 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 HS2ST1Q7LGA3 356 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 DHX58Q96C10 678 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 PLXNC1O60486 1568 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 N4BP3O15049 544 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 IL6STP40189 918 aaPredicted RBP18.8■□□□□ 0.6
ITGA3-204ENST00000505306 KRT222Q8N1A0 295 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 TIGD1Q96MW7 591 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 ZNF532Q9HCE3 1301 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 CCDC172P0C7W6 258 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 CEP135Q66GS9 1140 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 DTHD1Q6ZMT9 781 aa18.8■□□□□ 0.6
ITGA3-204ENST00000505306 GOLGA6L7A0A1B0GV03 622 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 CHD1O14646 1710 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 PLCD3Q8N3E9 789 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 TBC1D5Q92609 795 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 PAGR1Q9BTK6 254 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 KDM6BO15054 1643 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 PPEF1O14829 653 aaPredicted RBP18.79■□□□□ 0.6
ITGA3-204ENST00000505306 KIF5CO60282 957 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 PCCAP05165 728 aaPredicted RBP18.79■□□□□ 0.6
ITGA3-204ENST00000505306 NDUFB9Q9Y6M9 179 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 PSMA7O14818 248 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 CHMP2AO43633 222 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 DPH6Q7L8W6 267 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 TMEM87BQ96K49 555 aa18.79■□□□□ 0.6
ITGA3-204ENST00000505306 NOP2P46087 812 aaKnown RBP18.78■□□□□ 0.6
ITGA3-204ENST00000505306 DHX37Q8IY37 1157 aaKnown RBP18.78■□□□□ 0.6
ITGA3-204ENST00000505306 KBTBD3Q8NAB2 608 aa18.78■□□□□ 0.6
ITGA3-204ENST00000505306 GSTTP1A0A1W2PQM5 241 aa18.78■□□□□ 0.6
ITGA3-204ENST00000505306 TMCO5BA8MYB1 307 aa18.78■□□□□ 0.6
ITGA3-204ENST00000505306 BMS1Q14692 1282 aaKnown RBP18.78■□□□□ 0.6
ITGA3-204ENST00000505306 AKNAD1Q5T1N1 836 aa18.78■□□□□ 0.6
ITGA3-204ENST00000505306 APBB1IPQ7Z5R6 666 aaPredicted RBP18.78■□□□□ 0.6
ITGA3-204ENST00000505306 SMAP1Q8IYB5 467 aaPredicted RBP18.78■□□□□ 0.6
ITGA3-204ENST00000505306 BBXQ8WY36 941 aaPredicted RBP18.78■□□□□ 0.6
ITGA3-204ENST00000505306 MRPS27Q92552 414 aaKnown RBP18.78■□□□□ 0.6
ITGA3-204ENST00000505306 ZNF165P49910 485 aa18.78■□□□□ 0.6
ITGA3-204ENST00000505306 AK2P54819 239 aa18.78■□□□□ 0.6
ITGA3-204ENST00000505306 ZNF354CQ86Y25 554 aa18.78■□□□□ 0.6
ITGA3-204ENST00000505306 FNBP4Q8N3X1 1017 aaPredicted RBP18.78■□□□□ 0.6
ITGA3-204ENST00000505306 THRAP3Q9Y2W1 955 aaKnown RBP18.78■□□□□ 0.6
ITGA3-204ENST00000505306 PNMA6EA0A0J9YXQ4 647 aa18.77■□□□□ 0.6
ITGA3-204ENST00000505306 RUFY3Q7L099 469 aa18.77■□□□□ 0.6
ITGA3-204ENST00000505306 ERBB3P21860 1342 aa18.77■□□□□ 0.6
ITGA3-204ENST00000505306 USH1GQ495M9 461 aa18.77■□□□□ 0.59
ITGA3-204ENST00000505306 FERMT1Q9BQL6 677 aa18.77■□□□□ 0.59
ITGA3-204ENST00000505306 HOOK3Q86VS8 718 aa18.77■□□□□ 0.59
ITGA3-204ENST00000505306 HECW2Q9P2P5 1572 aa18.77■□□□□ 0.59
ITGA3-204ENST00000505306 SPTLC2O15270 562 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 PLIN2Q99541 437 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 SLC5A4Q9NY91 659 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 MAGI3Q5TCQ9 1506 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 FAM135BQ49AJ0 1406 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 CTDSPL2Q05D32 466 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 LUZP1Q86V48 1076 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 GLT8D2Q9H1C3 349 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 CHRNDQ07001 517 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 KIF4BQ2VIQ3 1234 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 GBP3Q9H0R5 595 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 MRVI1Q9Y6F6 885 aa18.76■□□□□ 0.59
ITGA3-204ENST00000505306 KIFC2Q96AC6 838 aa18.75■□□□□ 0.59
ITGA3-204ENST00000505306 HARSP12081 509 aaKnown RBP18.75■□□□□ 0.59
ITGA3-204ENST00000505306 CASQ1P31415 396 aa18.75■□□□□ 0.59
ITGA3-204ENST00000505306 SPC25Q9HBM1 224 aa18.75■□□□□ 0.59
ITGA3-204ENST00000505306 V9GY48 417 aaPredicted RBP18.75■□□□□ 0.59
ITGA3-204ENST00000505306 ZCCHC11Q5TAX3 1644 aaKnown RBP18.75■□□□□ 0.59
ITGA3-204ENST00000505306 IBTKQ9P2D0 1353 aaPredicted RBP18.75■□□□□ 0.59
ITGA3-204ENST00000505306 GSDMDP57764 484 aa18.75■□□□□ 0.59
ITGA3-204ENST00000505306 TFAP4Q01664 338 aa18.75■□□□□ 0.59
ITGA3-204ENST00000505306 PRPF4BQ13523 1007 aaKnown RBP18.75■□□□□ 0.59
ITGA3-204ENST00000505306 SNW1Q13573 536 aaKnown RBP18.75■□□□□ 0.59
ITGA3-204ENST00000505306 GADL1Q6ZQY3 521 aa18.75■□□□□ 0.59
ITGA3-204ENST00000505306 KDM5CP41229 1560 aa18.75■□□□□ 0.59
ITGA3-204ENST00000505306 CFBP00751 764 aa18.75■□□□□ 0.59
ITGA3-204ENST00000505306 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.75■□□□□ 0.59
ITGA3-204ENST00000505306 KIF4AO95239 1232 aa18.74■□□□□ 0.59
ITGA3-204ENST00000505306 EZRP15311 586 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms