RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 PHLPP2Q6ZVD8 1323 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 VWA3AA6NCI4 1184 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 ZNF213O14771 459 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 SERPINC1P01008 464 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 MYL5Q02045 173 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 CFAP100Q494V2 611 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 COL18A1P39060 1754 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 SEC31AO94979 1220 aaKnown RBP13.72□□□□□ -0.21
UBE3D-206ENST00000505226 TPM4P67936 248 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 SPECC1Q5M775 1068 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 APPBP2Q92624 585 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 CHMP4CQ96CF2 233 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 CARD6Q9BX69 1037 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 CPDO75976 1380 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 TADA3O75528 432 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 CCDC158Q5M9N0 1113 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 RESP18Q5W5W9 173 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 FAM177A1Q8N128 213 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-206ENST00000505226 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 PCDHA5Q9Y5H7 936 aa13.72□□□□□ -0.21
UBE3D-206ENST00000505226 URI1O94763 535 aaPredicted RBP13.71□□□□□ -0.21
UBE3D-206ENST00000505226 RALYLQ86SE5 291 aaKnown RBP13.71□□□□□ -0.21
UBE3D-206ENST00000505226 WDR24Q96S15 920 aa13.71□□□□□ -0.21
UBE3D-206ENST00000505226 ATG3Q9NT62 314 aa13.71□□□□□ -0.21
UBE3D-206ENST00000505226 LAMB4A4D0S4 1761 aa13.71□□□□□ -0.21
UBE3D-206ENST00000505226 FAM237AA0A1B0GTK4 181 aa13.71□□□□□ -0.22
UBE3D-206ENST00000505226 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.22
UBE3D-206ENST00000505226 SYNE4Q8N205 404 aa13.71□□□□□ -0.22
UBE3D-206ENST00000505226 MYL10Q9BUA6 226 aa13.71□□□□□ -0.22
UBE3D-206ENST00000505226 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.22
UBE3D-206ENST00000505226 ALS2Q96Q42 1657 aa13.71□□□□□ -0.22
UBE3D-206ENST00000505226 PPP6R2O75170 966 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 MDM2Q00987 491 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-206ENST00000505226 GRIN1Q05586 938 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 C1orf167Q5SNV9 1468 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 SASH3O75995 380 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 MCAMP43121 646 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 NTRK3Q16288 839 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 UBXN4Q92575 508 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 NOL10Q9BSC4 688 aaKnown RBP13.7□□□□□ -0.22
UBE3D-206ENST00000505226 ANGEL1Q9UNK9 670 aaKnown RBP13.7□□□□□ -0.22
UBE3D-206ENST00000505226 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-206ENST00000505226 ZFYP08048 801 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-206ENST00000505226 METAP2P50579 478 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBE3D-206ENST00000505226 APOA5Q6Q788 366 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 MED15Q96RN5 788 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 PPP2R2CQ9Y2T4 447 aa13.7□□□□□ -0.22
UBE3D-206ENST00000505226 A0A0U1RQG5 324 aaPredicted RBP13.69□□□□□ -0.22
UBE3D-206ENST00000505226 FMR1Q06787 632 aaKnown RBP eCLIP13.69□□□□□ -0.22
UBE3D-206ENST00000505226 TBX2Q13207 712 aaPredicted RBP13.69□□□□□ -0.22
UBE3D-206ENST00000505226 CCDC57Q2TAC2 916 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 TOGARAM2Q6ZUX3 1019 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 B4E1Z4 1266 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 TOP1P11387 765 aaKnown RBP13.69□□□□□ -0.22
UBE3D-206ENST00000505226 KRBA2Q6ZNG9 492 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 MICU3Q86XE3 530 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 FAM89AQ96GI7 184 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.69□□□□□ -0.22
UBE3D-206ENST00000505226 KCNH3Q9ULD8 1083 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 ECM29Q5VYK3 1845 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 MST1RQ04912 1400 aa13.69□□□□□ -0.22
UBE3D-206ENST00000505226 TUBB4AP04350 444 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 CYP2C19P33261 490 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 STK11IPQ8N1F8 1099 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 C19orf44Q9H6X5 657 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 MYO5AQ9Y4I1 1855 aaKnown RBP13.68□□□□□ -0.22
UBE3D-206ENST00000505226 PKD1L3Q7Z443 1732 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 UBN2Q6ZU65 1347 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 WDR19Q8NEZ3 1342 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 ADKP55263 362 aaKnown RBP13.68□□□□□ -0.22
UBE3D-206ENST00000505226 TAF3Q5VWG9 929 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 IGDCC4Q8TDY8 1250 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 ZCCHC17Q9NP64 241 aaKnown RBP13.68□□□□□ -0.22
UBE3D-206ENST00000505226 SEC31BQ9NQW1 1179 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
UBE3D-206ENST00000505226 NRDCO43847 1150 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 PRR29P0C7W0 189 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 GUCY1A2P33402 732 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 TOB1P50616 345 aaPredicted RBP13.68□□□□□ -0.22
UBE3D-206ENST00000505226 ZNF827Q17R98 1081 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 LRRFIP1Q32MZ4 808 aaKnown RBP13.68□□□□□ -0.22
UBE3D-206ENST00000505226 TC2NQ8N9U0 490 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 ISCA1Q9BUE6 129 aa13.68□□□□□ -0.22
UBE3D-206ENST00000505226 AKAP11Q9UKA4 1901 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 GRAMD1CQ8IYS0 662 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 CNNM3Q8NE01 707 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 MNS1Q8NEH6 495 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 PIH1D3Q9NQM4 214 aaKnown RBP13.67□□□□□ -0.22
UBE3D-206ENST00000505226 EFCAB8A8MWE9 144 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 CBFA2T2O43439 604 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 TBC1D8O95759 1140 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 ADD2P35612 726 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 SLC9C2Q5TAH2 1124 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 TMCO3Q6UWJ1 677 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 TRMT44Q8IYL2 757 aaKnown RBP13.67□□□□□ -0.22
UBE3D-206ENST00000505226 UBXN6Q9BZV1 441 aa13.67□□□□□ -0.22
UBE3D-206ENST00000505226 POLR3GO15318 223 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms