RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 APBA3O96018 575 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 RLBP1P12271 317 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 LIG1P18858 919 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 CHRNA4P43681 627 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 RACK1P63244 317 aaKnown RBP9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 PDE3AQ14432 1141 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 RELL1Q8IUW5 271 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 TMEM130Q8N3G9 435 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 RHOVQ96L33 236 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 RUSC1Q9BVN2 902 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 TMPRSS13Q9BYE2 586 aa9.52□□□□□ -0.89
TRAPPC13-207ENST00000505108 C9orf172C9J069 976 aa9.51□□□□□ -0.89
TRAPPC13-207ENST00000505108 PF4P02776 101 aa9.51□□□□□ -0.89
TRAPPC13-207ENST00000505108 RAD51AP2Q09MP3 1159 aa9.51□□□□□ -0.89
TRAPPC13-207ENST00000505108 LRRC14Q15048 493 aa9.51□□□□□ -0.89
TRAPPC13-207ENST00000505108 USP48Q86UV5 1035 aa9.51□□□□□ -0.89
TRAPPC13-207ENST00000505108 CD163Q86VB7 1156 aa9.51□□□□□ -0.89
TRAPPC13-207ENST00000505108 GPBAR1Q8TDU6 330 aa9.51□□□□□ -0.89
TRAPPC13-207ENST00000505108 GAL3ST3Q96A11 431 aa9.51□□□□□ -0.89
TRAPPC13-207ENST00000505108 DDX41Q9UJV9 622 aaKnown RBP9.51□□□□□ -0.89
TRAPPC13-207ENST00000505108 MEGF11A6BM72 1044 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 NOS3P29474 1203 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 FAM160A1Q05DH4 1040 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 SEPT6Q14141 434 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 MBTPS1Q14703 1052 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 EXOSC6Q5RKV6 272 aaKnown RBP9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 NACC1Q96RE7 527 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 WDR18Q9BV38 432 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 AKTIPQ9H8T0 292 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 KRT82Q9NSB4 513 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 ADAMTS1Q9UHI8 967 aa9.5□□□□□ -0.89
TRAPPC13-207ENST00000505108 C1QTNF9BB2RNN3 333 aa9.49□□□□□ -0.89
TRAPPC13-207ENST00000505108 GARTP22102 1010 aa9.49□□□□□ -0.89
TRAPPC13-207ENST00000505108 IREB2P48200 963 aaKnown RBP9.49□□□□□ -0.89
TRAPPC13-207ENST00000505108 CAMK2GQ13555 558 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC13-207ENST00000505108 PWP1Q13610 501 aa9.49□□□□□ -0.89
TRAPPC13-207ENST00000505108 ADGRE1Q14246 886 aa9.49□□□□□ -0.89
TRAPPC13-207ENST00000505108 WFDC12Q8WWY7 111 aa9.49□□□□□ -0.89
TRAPPC13-207ENST00000505108 RNF208Q9H0X6 261 aa9.49□□□□□ -0.89
TRAPPC13-207ENST00000505108 AOC2O75106 756 aa9.48□□□□□ -0.89
TRAPPC13-207ENST00000505108 TRIM37O94972 964 aa9.48□□□□□ -0.89
TRAPPC13-207ENST00000505108 ITGB2P05107 769 aa9.48□□□□□ -0.89
TRAPPC13-207ENST00000505108 NRG1Q02297 640 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC13-207ENST00000505108 LMNB2Q03252 620 aa9.48□□□□□ -0.89
TRAPPC13-207ENST00000505108 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC13-207ENST00000505108 DRD2P14416 443 aa9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 ERCC5P28715 1186 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 CDK8P49336 464 aa9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 KIF4BQ2VIQ3 1234 aa9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 FBXL19Q6PCT2 694 aa9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 BNC2Q6ZN30 1099 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 Q6ZS46 218 aa9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 TRIM42Q8IWZ5 723 aa9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 JARID2Q92833 1246 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 PCDHGC5Q9Y5F6 944 aa9.47□□□□□ -0.89
TRAPPC13-207ENST00000505108 GDF11O95390 407 aa9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 EIF4A3P38919 411 aaKnown RBP9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 AKAP4Q5JQC9 854 aa9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 GOLM1Q8NBJ4 401 aa9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 SMG8Q8ND04 991 aaKnown RBP9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 ACSBG1Q96GR2 724 aa9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 MIR1-1HGQ9H1L0 117 aa9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 SUGCTQ9HAC7 445 aa9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 RAD18Q9NS91 495 aa9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 PPP1R9AQ9ULJ8 1098 aa9.46□□□□□ -0.9
TRAPPC13-207ENST00000505108 TIAF1O95411 115 aa9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 F13A1P00488 732 aa9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 GLB1P16278 677 aa9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 LMNB1P20700 586 aa9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 HP1BP3Q5SSJ5 553 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 SCARA3Q6AZY7 606 aa9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 ZNF296Q8WUU4 475 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 MEGF10Q96KG7 1140 aa9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 UBL7Q96S82 380 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 KCNQ5Q9NR82 932 aa9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 PCDHA4Q9UN74 947 aa9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC13-207ENST00000505108 ADH5P11766 374 aa9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 PREPP48147 710 aa9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 INPP5AQ14642 412 aa9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 SNAP47Q5SQN1 464 aa9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 TXNRD3Q86VQ6 643 aa9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 ZNF654Q8IZM8 581 aa9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 C12orf50Q8NA57 414 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 TGIF2Q9GZN2 237 aa9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 ACBD3Q9H3P7 528 aa9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 CYP4F12Q9HCS2 524 aa9.44□□□□□ -0.9
TRAPPC13-207ENST00000505108 FAM221AA4D161 298 aa9.43□□□□□ -0.9
TRAPPC13-207ENST00000505108 GREM1O60565 184 aa9.43□□□□□ -0.9
TRAPPC13-207ENST00000505108 SOX4Q06945 474 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC13-207ENST00000505108 ANKRD34AQ69YU3 496 aa9.43□□□□□ -0.9
TRAPPC13-207ENST00000505108 FDX2Q6P4F2 183 aa9.43□□□□□ -0.9
TRAPPC13-207ENST00000505108 TMEM151AQ8N4L1 468 aa9.43□□□□□ -0.9
TRAPPC13-207ENST00000505108 FBXO27Q8NI29 283 aa9.43□□□□□ -0.9
TRAPPC13-207ENST00000505108 SPON2Q9BUD6 331 aa9.43□□□□□ -0.9
TRAPPC13-207ENST00000505108 SYNGAP1Q96PV0 1343 aa9.42□□□□□ -0.9
TRAPPC13-207ENST00000505108 TMPRSS2O15393 492 aa9.42□□□□□ -0.9
TRAPPC13-207ENST00000505108 SLFN14P0C7P3 912 aa9.42□□□□□ -0.9
TRAPPC13-207ENST00000505108 CRKP46108 304 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms