RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 METTL16Q86W50 562 aaKnown RBP7.49□□□□□ -1.21
COPB2-204ENST00000504295 TSC1Q92574 1164 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 LTV1Q96GA3 475 aaPredicted RBP7.49□□□□□ -1.21
COPB2-204ENST00000504295 SEC31BQ9NQW1 1179 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.49□□□□□ -1.21
COPB2-204ENST00000504295 BRWD3Q6RI45 1802 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 SOCS7O14512 581 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 SASH3O75995 380 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 VSTM4Q8IW00 320 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 NECAB1Q8N987 351 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 ATP8B3O60423 1300 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 PNPLA7Q6ZV29 1317 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 RLFQ13129 1914 aa7.49□□□□□ -1.21
COPB2-204ENST00000504295 ACTN4O43707 911 aaKnown RBP7.48□□□□□ -1.21
COPB2-204ENST00000504295 CDC27P30260 824 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 NLRP12P59046 1061 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 MORC3Q14149 939 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 E2F4Q16254 413 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 PLEKHO1Q53GL0 409 aaPredicted RBP7.48□□□□□ -1.21
COPB2-204ENST00000504295 STK11IPQ8N1F8 1099 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 FBXO18Q8NFZ0 1043 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 BRF1Q92994 677 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 DCAF5Q96JK2 942 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 TTYH3Q9C0H2 523 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 KIAA1468Q9P260 1216 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 SMC3Q9UQE7 1217 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 ERVV-2B6SEH9 535 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 TBC1D8O95759 1140 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 SLC39A14Q15043 492 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 NEK1Q96PY6 1258 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 CGNQ9P2M7 1197 aaKnown RBP7.48□□□□□ -1.21
COPB2-204ENST00000504295 CLSTN1O94985 981 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 TFCP2Q12800 502 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 FOXR2Q6PJQ5 311 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 BRAPQ7Z569 592 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 ZNF397Q8NF99 534 aaPredicted RBP7.48□□□□□ -1.21
COPB2-204ENST00000504295 OSBP2Q969R2 916 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 TMEM51Q9NW97 253 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 MRFAP1Q9Y605 127 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 ZNF536O15090 1300 aa7.48□□□□□ -1.21
COPB2-204ENST00000504295 WDR90Q96KV7 1748 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 A0A1B0GTH6 734 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 Q6ZUG5 572 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 PDCL2Q8N4E4 241 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 TC2NQ8N9U0 490 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 ZNF496Q96IT1 587 aaPredicted RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 FBXO2Q9UK22 296 aaPredicted RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 ATXN2Q99700 1313 aaKnown RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 SCN4AP35499 1836 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 SNED1Q8TER0 1413 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 SHOX2O60902 331 aaPredicted RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 CAPN2P17655 700 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 NR1I3Q14994 352 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 PPP4R3BQ5MIZ7 849 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 CLASRPQ8N2M8 674 aaKnown RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 OLIG1Q8TAK6 271 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 FTOQ9C0B1 505 aaKnown RBP eCLIP7.47□□□□□ -1.211e-7■■■□□ 18.7
COPB2-204ENST00000504295 ORC3Q9UBD5 711 aaPredicted RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 IQSEC3Q9UPP2 1182 aaPredicted RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 DHX8Q14562 1220 aaKnown RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 USHBP1Q8N6Y0 703 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 C4orf32Q8N8J7 132 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 AK7Q96M32 723 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 SEC62Q99442 399 aaKnown RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 TEX13AQ9BXU3 409 aaPredicted RBP7.47□□□□□ -1.21
COPB2-204ENST00000504295 LY9Q9HBG7 655 aa7.47□□□□□ -1.21
COPB2-204ENST00000504295 ZNF236Q9UL36 1845 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 PTPDC1A2A3K4 754 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 SEMA3EO15041 775 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 AARSP49588 968 aaKnown RBP eCLIP7.46□□□□□ -1.21
COPB2-204ENST00000504295 NDUFA8P51970 172 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 SEC23AQ15436 765 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 DPY19L2P1Q6NXN4 242 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 CCDC186Q7Z3E2 898 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 PAGR1Q9BTK6 254 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 DIAPH3Q9NSV4 1193 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 NENFQ9UMX5 172 aa7.46□□□□□ -1.21
COPB2-204ENST00000504295 CPP00450 1065 aa7.46□□□□□ -1.22
COPB2-204ENST00000504295 SEMA3FQ13275 785 aa7.46□□□□□ -1.22
COPB2-204ENST00000504295 NAA30Q147X3 362 aaPredicted RBP7.46□□□□□ -1.22
COPB2-204ENST00000504295 DPCR1Q3MIW9 517 aa7.46□□□□□ -1.22
COPB2-204ENST00000504295 FAM173BQ6P4H8 233 aa7.46□□□□□ -1.22
COPB2-204ENST00000504295 CNNM4Q6P4Q7 775 aa7.46□□□□□ -1.22
COPB2-204ENST00000504295 AACSQ86V21 672 aa7.46□□□□□ -1.22
COPB2-204ENST00000504295 DBNDD2Q9BQY9 259 aa7.46□□□□□ -1.22
COPB2-204ENST00000504295 EPB41L4AQ9HCS5 686 aaPredicted RBP7.46□□□□□ -1.22
COPB2-204ENST00000504295 HDAC5Q9UQL6 1122 aa7.46□□□□□ -1.22
COPB2-204ENST00000504295 LCA5LO95447 670 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 MAP4K4O95819 1239 aaPredicted RBP7.45□□□□□ -1.22
COPB2-204ENST00000504295 LIFRP42702 1097 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 BLOC1S2Q6QNY1 142 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 ILDR2Q71H61 639 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 CCDC191Q8NCU4 936 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 SLC4A9Q96Q91 983 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 PCDH11XQ9BZA7 1347 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 PCDH11YQ9BZA8 1340 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 RASSF10A6NK89 507 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 GSDMDP57764 484 aa7.45□□□□□ -1.22
COPB2-204ENST00000504295 RBM10P98175 930 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms