RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 DLG5Q8TDM6 1919 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 PHF20L1A8MW92 1017 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 PSMD14O00487 310 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 TBC1D8O95759 1140 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 SNRPA1P09661 255 aaKnown RBP4.85□□□□□ -1.63
USP46-205ENST00000504078 HCLS1P14317 486 aaPredicted RBP4.85□□□□□ -1.63
USP46-205ENST00000504078 MDM2Q00987 491 aaPredicted RBP4.85□□□□□ -1.63
USP46-205ENST00000504078 MAP2K5Q13163 448 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 PTPRNQ16849 979 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 KIF4BQ2VIQ3 1234 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 RNFT1Q5M7Z0 435 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 LINC00528Q8N1L1 170 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 HLA-CQ95604 372 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 ITPKCQ96DU7 683 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 RBM17Q96I25 401 aaKnown RBP4.85□□□□□ -1.63
USP46-205ENST00000504078 TEX13AQ9BXU3 409 aaPredicted RBP4.85□□□□□ -1.63
USP46-205ENST00000504078 RSPH6AQ9H0K4 717 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 ENAMQ9NRM1 1142 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 CNOT7Q9UIV1 285 aaKnown RBP4.85□□□□□ -1.63
USP46-205ENST00000504078 DNMT3LQ9UJW3 386 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 HDAC9Q9UKV0 1011 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 ZNRF3Q9ULT6 936 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 MAP3K15Q6ZN16 1313 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 RTL9Q8NET4 1388 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 SCN9AQ15858 1988 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 PDE4DIPQ5VU43 2346 aa4.85□□□□□ -1.63
USP46-205ENST00000504078 SPEF2Q9C093 1822 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 IBTKQ9P2D0 1353 aaPredicted RBP4.84□□□□□ -1.63
USP46-205ENST00000504078 KIF7Q2M1P5 1343 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 K7ELQ4 463 aaPredicted RBP4.84□□□□□ -1.63
USP46-205ENST00000504078 TULP1O00294 542 aaPredicted RBP4.84□□□□□ -1.63
USP46-205ENST00000504078 MYCP01106 439 aaPredicted RBP4.84□□□□□ -1.63
USP46-205ENST00000504078 EIF4G2P78344 907 aaKnown RBP eCLIP4.84□□□□□ -1.63
USP46-205ENST00000504078 MAP3K10Q02779 954 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 PTSQ03393 145 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 KCNH2Q12809 1159 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 PROSER3Q2NL68 480 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 LINC01559Q495D7 138 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 HABP4Q5JVS0 413 aaKnown RBP4.84□□□□□ -1.63
USP46-205ENST00000504078 PRAMEF18Q5VWM3 479 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 CLEC4GQ6UXB4 293 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 CDC37L1Q7L3B6 337 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 KRTAP1-3Q8IUG1 177 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 C2orf69Q8N8R5 385 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 ZNF296Q8WUU4 475 aaPredicted RBP4.84□□□□□ -1.63
USP46-205ENST00000504078 CDCA5Q96FF9 252 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 HHIPL1Q96JK4 782 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 NYXQ9GZU5 481 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 ZFAND3Q9H8U3 227 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 KCNQ5Q9NR82 932 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 SAGE1Q9NXZ1 904 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 ATP6V0A2Q9Y487 856 aa4.84□□□□□ -1.63
USP46-205ENST00000504078 ZSWIM8A7E2V4 1837 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 CDHR2Q9BYE9 1310 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 C6orf229H3BNL8 230 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 H7C1D1 291 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 ECE2O60344 883 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 FXR1P51114 621 aaKnown RBP eCLIP4.83□□□□□ -1.64
USP46-205ENST00000504078 GUCA2AQ02747 115 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 KIAA2012Q0VF49 1180 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 PRKG1Q13976 671 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 TTLL12Q14166 644 aaPredicted RBP4.83□□□□□ -1.64
USP46-205ENST00000504078 RTL5Q5HYW3 569 aaPredicted RBP4.83□□□□□ -1.64
USP46-205ENST00000504078 ANGEL2Q5VTE6 544 aaKnown RBP4.83□□□□□ -1.64
USP46-205ENST00000504078 CC2D2BQ6DHV5 1058 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 SV2AQ7L0J3 742 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 MEIOBQ8N635 442 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 KRI1Q8N9T8 703 aaKnown RBP4.83□□□□□ -1.64
USP46-205ENST00000504078 GALNT6Q8NCL4 622 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 RTF1Q92541 710 aaKnown RBP4.83□□□□□ -1.64
USP46-205ENST00000504078 SYMPKQ92797 1274 aaKnown RBP4.83□□□□□ -1.64
USP46-205ENST00000504078 CRAMP1Q96RY5 1269 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 CSRNP1Q96S65 589 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 TSEN34Q9BSV6 310 aaKnown RBP4.83□□□□□ -1.64
USP46-205ENST00000504078 R3HDMLQ9H3Y0 253 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 FZD1Q9UP38 647 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 MKI67P46013 3256 aaKnown RBP4.83□□□□□ -1.64
USP46-205ENST00000504078 HTTP42858 3142 aa4.83□□□□□ -1.64
USP46-205ENST00000504078 POLR2AP24928 1970 aaKnown RBP4.82□□□□□ -1.64
USP46-205ENST00000504078 ZNF646O15015 1829 aaPredicted RBP4.82□□□□□ -1.64
USP46-205ENST00000504078 UBE2Q2LH0YL09 131 aa4.82□□□□□ -1.64
USP46-205ENST00000504078 PROCP04070 461 aa4.82□□□□□ -1.64
USP46-205ENST00000504078 U2AF1L5P0DN76 240 aaPredicted RBP4.82□□□□□ -1.64
USP46-205ENST00000504078 HOXA10P31260 410 aaPredicted RBP4.82□□□□□ -1.64
USP46-205ENST00000504078 CLCN1P35523 988 aa4.82□□□□□ -1.64
USP46-205ENST00000504078 U2AF1Q01081 240 aaKnown RBP eCLIP4.82□□□□□ -1.64
USP46-205ENST00000504078 AIMP1Q12904 312 aaKnown RBP4.82□□□□□ -1.64
USP46-205ENST00000504078 TNIP1Q15025 636 aa4.82□□□□□ -1.64
USP46-205ENST00000504078 CCDC155Q8N6L0 562 aa4.82□□□□□ -1.64
USP46-205ENST00000504078 BEND7Q8N7W2 519 aaPredicted RBP4.82□□□□□ -1.64
USP46-205ENST00000504078 SUPT20HQ8NEM7 779 aa4.82□□□□□ -1.64
USP46-205ENST00000504078 DCPSQ96C86 337 aaKnown RBP4.82□□□□□ -1.64
USP46-205ENST00000504078 TMX4Q9H1E5 349 aaPredicted RBP4.82□□□□□ -1.64
USP46-205ENST00000504078 ZNF609O15014 1411 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 RBBP6Q7Z6E9 1792 aaKnown RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 TTLL8A6PVC2 850 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 GPR25O00155 361 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 IRF6O14896 467 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 SASH1O94885 1247 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 ITGB2P05107 769 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms