RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 DAGLAQ9Y4D2 1042 aa7.69□□□□□ -1.18
SUB1-204ENST00000504016 ZNF157P51786 506 aaPredicted RBP7.68□□□□□ -1.18
SUB1-204ENST00000504016 ZNF765Q7L2R6 523 aa7.68□□□□□ -1.18
SUB1-204ENST00000504016 WDR18Q9BV38 432 aa7.68□□□□□ -1.18
SUB1-204ENST00000504016 LGR6Q9HBX8 967 aa7.68□□□□□ -1.18
SUB1-204ENST00000504016 TRAK1Q9UPV9 953 aa7.68□□□□□ -1.18
SUB1-204ENST00000504016 TMEM238LA0A1B0GVL6 79 aa7.67□□□□□ -1.18
SUB1-204ENST00000504016 GPR182O15218 404 aa7.67□□□□□ -1.18
SUB1-204ENST00000504016 PRPF40BQ6NWY9 871 aaKnown RBP7.67□□□□□ -1.18
SUB1-204ENST00000504016 TXNDC2Q86VQ3 553 aa7.67□□□□□ -1.18
SUB1-204ENST00000504016 GSX1Q9H4S2 264 aaPredicted RBP7.67□□□□□ -1.18
SUB1-204ENST00000504016 LIG1P18858 919 aa7.66□□□□□ -1.18
SUB1-204ENST00000504016 RPS26P11Q5JNZ5 115 aaPredicted RBP7.66□□□□□ -1.18
SUB1-204ENST00000504016 CCER1Q8TC90 406 aaPredicted RBP7.66□□□□□ -1.18
SUB1-204ENST00000504016 CSRNP1Q96S65 589 aa7.66□□□□□ -1.18
SUB1-204ENST00000504016 ZC3H12CQ9C0D7 883 aaKnown RBP7.66□□□□□ -1.18
SUB1-204ENST00000504016 ZC3H7BQ9UGR2 993 aaKnown RBP7.66□□□□□ -1.18
SUB1-204ENST00000504016 PPP1R9AQ9ULJ8 1098 aa7.66□□□□□ -1.18
SUB1-204ENST00000504016 BTBD11A6QL63 1104 aa7.65□□□□□ -1.18
SUB1-204ENST00000504016 DYNC1LI2O43237 492 aaPredicted RBP7.65□□□□□ -1.18
SUB1-204ENST00000504016 SLFN14P0C7P3 912 aa7.65□□□□□ -1.18
SUB1-204ENST00000504016 OGFOD3Q6PK18 319 aa7.65□□□□□ -1.18
SUB1-204ENST00000504016 SEZ6L2Q6UXD5 910 aa7.65□□□□□ -1.18
SUB1-204ENST00000504016 FLCNQ8NFG4 579 aa7.65□□□□□ -1.18
SUB1-204ENST00000504016 EPS8L3Q8TE67 593 aaKnown RBP7.65□□□□□ -1.18
SUB1-204ENST00000504016 DMRTB1Q96MA1 342 aa7.65□□□□□ -1.18
SUB1-204ENST00000504016 SYNGAP1Q96PV0 1343 aa7.65□□□□□ -1.18
SUB1-204ENST00000504016 C1GALT1Q9NS00 363 aa7.65□□□□□ -1.18
SUB1-204ENST00000504016 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.18
SUB1-204ENST00000504016 IGHA2P01877 340 aa7.64□□□□□ -1.19
SUB1-204ENST00000504016 YBX3P16989 372 aaKnown RBP eCLIP7.64□□□□□ -1.19
SUB1-204ENST00000504016 PDE4CQ08493 712 aa7.64□□□□□ -1.19
SUB1-204ENST00000504016 GRM2Q14416 872 aa7.64□□□□□ -1.19
SUB1-204ENST00000504016 DTHD1Q6ZMT9 781 aa7.64□□□□□ -1.19
SUB1-204ENST00000504016 WDR89Q96FK6 387 aaPredicted RBP7.64□□□□□ -1.19
SUB1-204ENST00000504016 CCDC86Q9H6F5 360 aaKnown RBP7.64□□□□□ -1.19
SUB1-204ENST00000504016 PIDD1Q9HB75 910 aa7.64□□□□□ -1.19
SUB1-204ENST00000504016 TMPRSS2O15393 492 aa7.63□□□□□ -1.19
SUB1-204ENST00000504016 HNRNPUQ00839 825 aaKnown RBP eCLIP7.63□□□□□ -1.19
SUB1-204ENST00000504016 FAAP100Q0VG06 881 aa7.63□□□□□ -1.19
SUB1-204ENST00000504016 CYP27C1Q4G0S4 372 aa7.63□□□□□ -1.19
SUB1-204ENST00000504016 NFXL1Q6ZNB6 911 aa7.63□□□□□ -1.19
SUB1-204ENST00000504016 AGBL5Q8NDL9 886 aa7.63□□□□□ -1.19
SUB1-204ENST00000504016 GLIS3Q8NEA6 775 aa7.63□□□□□ -1.19
SUB1-204ENST00000504016 NLRP2Q9NX02 1062 aa7.63□□□□□ -1.19
SUB1-204ENST00000504016 FCGRTP55899 365 aa7.62□□□□□ -1.19
SUB1-204ENST00000504016 PPP2R3AQ06190 1150 aa7.62□□□□□ -1.19
SUB1-204ENST00000504016 ALKBH8Q96BT7 664 aaKnown RBP7.62□□□□□ -1.19
SUB1-204ENST00000504016 RBCK1Q9BYM8 510 aa7.62□□□□□ -1.19
SUB1-204ENST00000504016 ATXN3LQ9H3M9 355 aa7.62□□□□□ -1.19
SUB1-204ENST00000504016 CRIM1Q9NZV1 1036 aa7.62□□□□□ -1.19
SUB1-204ENST00000504016 GPN3Q9UHW5 284 aaPredicted RBP7.62□□□□□ -1.19
SUB1-204ENST00000504016 GSTP1P09211 210 aaKnown RBP7.61□□□□□ -1.19
SUB1-204ENST00000504016 ID3Q02535 119 aa7.61□□□□□ -1.19
SUB1-204ENST00000504016 CBLL1Q75N03 491 aa7.61□□□□□ -1.19
SUB1-204ENST00000504016 FANCD2OSQ96PS1 177 aa7.61□□□□□ -1.19
SUB1-204ENST00000504016 PAK6Q9NQU5 681 aaPredicted RBP7.61□□□□□ -1.19
SUB1-204ENST00000504016 ZNF862O60290 1169 aa7.6□□□□□ -1.19
SUB1-204ENST00000504016 RNGTTO60942 597 aaKnown RBP7.6□□□□□ -1.19
SUB1-204ENST00000504016 SMYD4Q8IYR2 804 aaPredicted RBP7.6□□□□□ -1.19
SUB1-204ENST00000504016 KCNB2Q92953 911 aa7.6□□□□□ -1.19
SUB1-204ENST00000504016 KRT82Q9NSB4 513 aa7.6□□□□□ -1.19
SUB1-204ENST00000504016 TMEM39AQ9NV64 488 aa7.6□□□□□ -1.19
SUB1-204ENST00000504016 BIN2Q9UBW5 565 aaPredicted RBP7.6□□□□□ -1.19
SUB1-204ENST00000504016 SLC5A6Q9Y289 635 aa7.6□□□□□ -1.19
SUB1-204ENST00000504016 FAM87AP0C7U9 286 aa7.59□□□□□ -1.19
SUB1-204ENST00000504016 PDIA4P13667 645 aaKnown RBP7.59□□□□□ -1.19
SUB1-204ENST00000504016 CDK5R2Q13319 367 aa7.59□□□□□ -1.19
SUB1-204ENST00000504016 COL19A1Q14993 1142 aa7.59□□□□□ -1.19
SUB1-204ENST00000504016 KIF4BQ2VIQ3 1234 aa7.59□□□□□ -1.19
SUB1-204ENST00000504016 PI16Q6UXB8 463 aa7.59□□□□□ -1.19
SUB1-204ENST00000504016 AEBP1Q8IUX7 1158 aa7.59□□□□□ -1.19
SUB1-204ENST00000504016 BCL7CQ8WUZ0 217 aaPredicted RBP7.59□□□□□ -1.19
SUB1-204ENST00000504016 ASIC4Q96FT7 647 aa7.59□□□□□ -1.19
SUB1-204ENST00000504016 DISC1Q9NRI5 854 aa7.59□□□□□ -1.19
SUB1-204ENST00000504016 SOWAHDA6NJG2 315 aa7.58□□□□□ -1.2
SUB1-204ENST00000504016 TTLL4Q14679 1199 aa7.58□□□□□ -1.2
SUB1-204ENST00000504016 STK11IPQ8N1F8 1099 aa7.58□□□□□ -1.2
SUB1-204ENST00000504016 BCO2Q9BYV7 579 aa7.58□□□□□ -1.2
SUB1-204ENST00000504016 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
SUB1-204ENST00000504016 XRCC5P13010 732 aaKnown RBP7.57□□□□□ -1.2
SUB1-204ENST00000504016 HCLS1P14317 486 aaPredicted RBP7.57□□□□□ -1.2
SUB1-204ENST00000504016 JUNBP17275 347 aaPredicted RBP7.57□□□□□ -1.2
SUB1-204ENST00000504016 TMC7Q7Z402 723 aa7.57□□□□□ -1.2
SUB1-204ENST00000504016 KRTAP9-9Q9BYP9 154 aa7.57□□□□□ -1.2
SUB1-204ENST00000504016 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
SUB1-204ENST00000504016 SSU72Q9NP77 194 aaKnown RBP7.57□□□□□ -1.2
SUB1-204ENST00000504016 PLCB3Q01970 1234 aa7.56□□□□□ -1.2
SUB1-204ENST00000504016 PLCL1Q15111 1095 aa7.56□□□□□ -1.2
SUB1-204ENST00000504016 ZNF574Q6ZN55 896 aaPredicted RBP7.56□□□□□ -1.2
SUB1-204ENST00000504016 PDZD3Q86UT5 571 aa7.56□□□□□ -1.2
SUB1-204ENST00000504016 SULF2Q8IWU5 870 aa7.56□□□□□ -1.2
SUB1-204ENST00000504016 DCTN4Q9UJW0 460 aa7.56□□□□□ -1.2
SUB1-204ENST00000504016 PCOLCE2Q9UKZ9 415 aa7.56□□□□□ -1.2
SUB1-204ENST00000504016 PCDHGC5Q9Y5F6 944 aa7.56□□□□□ -1.2
SUB1-204ENST00000504016 ITGB5P18084 799 aa7.55□□□□□ -1.2
SUB1-204ENST00000504016 ARNTP27540 789 aa7.55□□□□□ -1.2
SUB1-204ENST00000504016 BNIP3Q12983 259 aa7.55□□□□□ -1.2
SUB1-204ENST00000504016 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.55□□□□□ -1.2
SUB1-204ENST00000504016 NXPE4Q6UWF7 544 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms