RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 HNRNPUQ00839 825 aaKnown RBP eCLIP9.75□□□□□ -0.85
NIPBL-203ENST00000503274 ZNF252P-AS1Q0IIN9 211 aa9.75□□□□□ -0.85
NIPBL-203ENST00000503274 TSNAXIP1Q2TAA8 658 aa9.75□□□□□ -0.85
NIPBL-203ENST00000503274 LDLRAD1Q5T700 205 aa9.75□□□□□ -0.85
NIPBL-203ENST00000503274 TTBK2Q6IQ55 1244 aa9.75□□□□□ -0.85
NIPBL-203ENST00000503274 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
NIPBL-203ENST00000503274 SMG8Q8ND04 991 aaKnown RBP9.75□□□□□ -0.85
NIPBL-203ENST00000503274 GRIN3AQ8TCU5 1115 aa9.75□□□□□ -0.85
NIPBL-203ENST00000503274 K7ELQ4 463 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-203ENST00000503274 LIG1P18858 919 aa9.74□□□□□ -0.85
NIPBL-203ENST00000503274 MAP3K11Q16584 847 aa9.74□□□□□ -0.85
NIPBL-203ENST00000503274 MAP1SQ66K74 1059 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-203ENST00000503274 LLGL2Q6P1M3 1020 aa9.74□□□□□ -0.85
NIPBL-203ENST00000503274 C12orf50Q8NA57 414 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-203ENST00000503274 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
NIPBL-203ENST00000503274 UBL7Q96S82 380 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-203ENST00000503274 SSBP4Q9BWG4 385 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-203ENST00000503274 KIAA1522Q9P206 1035 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-203ENST00000503274 LIG3P49916 1009 aa9.73□□□□□ -0.85
NIPBL-203ENST00000503274 RPS26P62854 115 aaKnown RBP9.73□□□□□ -0.85
NIPBL-203ENST00000503274 RASIP1Q5U651 963 aa9.73□□□□□ -0.85
NIPBL-203ENST00000503274 SART1O43290 800 aaKnown RBP9.72□□□□□ -0.85
NIPBL-203ENST00000503274 ZNF862O60290 1169 aa9.72□□□□□ -0.85
NIPBL-203ENST00000503274 AOC2O75106 756 aa9.72□□□□□ -0.85
NIPBL-203ENST00000503274 RECKO95980 971 aa9.72□□□□□ -0.85
NIPBL-203ENST00000503274 FURINP09958 794 aa9.72□□□□□ -0.85
NIPBL-203ENST00000503274 WDR89Q96FK6 387 aaPredicted RBP9.72□□□□□ -0.85
NIPBL-203ENST00000503274 WDR18Q9BV38 432 aa9.72□□□□□ -0.85
NIPBL-203ENST00000503274 SYNGAP1Q96PV0 1343 aa9.72□□□□□ -0.85
NIPBL-203ENST00000503274 TRIM37O94972 964 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 TIAF1O95411 115 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 SLFN14P0C7P3 912 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 DRD2P14416 443 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.86
NIPBL-203ENST00000503274 SOX4Q06945 474 aaPredicted RBP9.71□□□□□ -0.86
NIPBL-203ENST00000503274 KIF4BQ2VIQ3 1234 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 AKAP4Q5JQC9 854 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 SCARA3Q6AZY7 606 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 MPRIPQ6WCQ1 1025 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 AGMOQ6ZNB7 445 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 GPBAR1Q8TDU6 330 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 TP53INP1Q96A56 240 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 FAM46AQ96IP4 442 aaKnown RBP9.71□□□□□ -0.86
NIPBL-203ENST00000503274 TPSG1Q9NRR2 321 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 CACNA2D2Q9NY47 1150 aa9.71□□□□□ -0.86
NIPBL-203ENST00000503274 LMNB1P20700 586 aa9.7□□□□□ -0.86
NIPBL-203ENST00000503274 PREPP48147 710 aa9.7□□□□□ -0.86
NIPBL-203ENST00000503274 UVSSAQ2YD98 709 aa9.7□□□□□ -0.86
NIPBL-203ENST00000503274 RELL1Q8IUW5 271 aa9.7□□□□□ -0.86
NIPBL-203ENST00000503274 ACSBG1Q96GR2 724 aa9.7□□□□□ -0.86
NIPBL-203ENST00000503274 RSRP1Q9BUV0 290 aa9.7□□□□□ -0.86
NIPBL-203ENST00000503274 ADH5P11766 374 aa9.69□□□□□ -0.86
NIPBL-203ENST00000503274 PWP1Q13610 501 aa9.69□□□□□ -0.86
NIPBL-203ENST00000503274 DOC2BQ14184 412 aa9.69□□□□□ -0.86
NIPBL-203ENST00000503274 HS2ST1Q7LGA3 356 aa9.69□□□□□ -0.86
NIPBL-203ENST00000503274 PHC3Q8NDX5 983 aa9.68□□□□□ -0.86
NIPBL-203ENST00000503274 UTP4Q969X6 686 aaKnown RBP9.68□□□□□ -0.86
NIPBL-203ENST00000503274 METTL5Q9NRN9 209 aaKnown RBP9.68□□□□□ -0.86
NIPBL-203ENST00000503274 GGT7Q9UJ14 662 aa9.68□□□□□ -0.86
NIPBL-203ENST00000503274 AP4E1Q9UPM8 1137 aa9.68□□□□□ -0.86
NIPBL-203ENST00000503274 TLR6Q9Y2C9 796 aa9.68□□□□□ -0.86
NIPBL-203ENST00000503274 F6X3S4 739 aa9.67□□□□□ -0.86
NIPBL-203ENST00000503274 SCAMP3O14828 347 aaKnown RBP9.67□□□□□ -0.86
NIPBL-203ENST00000503274 GAS2O43903 313 aaKnown RBP9.67□□□□□ -0.86
NIPBL-203ENST00000503274 TFE3P19532 575 aaPredicted RBP9.67□□□□□ -0.86
NIPBL-203ENST00000503274 GBP2P32456 591 aaPredicted RBP9.67□□□□□ -0.86
NIPBL-203ENST00000503274 ZNF76P36508 570 aa9.67□□□□□ -0.86
NIPBL-203ENST00000503274 ERMP1Q7Z2K6 904 aa9.67□□□□□ -0.86
NIPBL-203ENST00000503274 ARMC10Q8N2F6 343 aa9.67□□□□□ -0.86
NIPBL-203ENST00000503274 C2CD4AQ8NCU7 369 aaPredicted RBP9.67□□□□□ -0.86
NIPBL-203ENST00000503274 MYRFLQ96LU7 910 aa9.67□□□□□ -0.86
NIPBL-203ENST00000503274 TMEM74Q96NL1 305 aa9.67□□□□□ -0.86
NIPBL-203ENST00000503274 PPP1R9AQ9ULJ8 1098 aa9.67□□□□□ -0.86
NIPBL-203ENST00000503274 PCDHB5Q9Y5E4 795 aa9.67□□□□□ -0.86
NIPBL-203ENST00000503274 PCDHGC5Q9Y5F6 944 aa9.67□□□□□ -0.86
NIPBL-203ENST00000503274 DHX15O43143 795 aaKnown RBP9.66□□□□□ -0.86
NIPBL-203ENST00000503274 FANCCQ00597 558 aa9.66□□□□□ -0.86
NIPBL-203ENST00000503274 ID3Q02535 119 aa9.66□□□□□ -0.86
NIPBL-203ENST00000503274 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.66□□□□□ -0.86
NIPBL-203ENST00000503274 DYMQ7RTS9 669 aa9.66□□□□□ -0.86
NIPBL-203ENST00000503274 MIR1-1HGQ9H1L0 117 aa9.66□□□□□ -0.86
NIPBL-203ENST00000503274 KBTBD4Q9NVX7 518 aa9.66□□□□□ -0.86
NIPBL-203ENST00000503274 PCDHA4Q9UN74 947 aa9.66□□□□□ -0.86
NIPBL-203ENST00000503274 TMPRSS2O15393 492 aa9.65□□□□□ -0.86
NIPBL-203ENST00000503274 USP11P51784 963 aa9.65□□□□□ -0.86
NIPBL-203ENST00000503274 ZC3H12AQ5D1E8 599 aaKnown RBP9.65□□□□□ -0.86
NIPBL-203ENST00000503274 RNF34Q969K3 372 aa9.65□□□□□ -0.86
NIPBL-203ENST00000503274 GAL3ST3Q96A11 431 aa9.65□□□□□ -0.86
NIPBL-203ENST00000503274 COPRSQ9NQ92 184 aa9.65□□□□□ -0.86
NIPBL-203ENST00000503274 CRIM1Q9NZV1 1036 aa9.65□□□□□ -0.86
NIPBL-203ENST00000503274 HIF3AQ9Y2N7 669 aa9.65□□□□□ -0.86
NIPBL-203ENST00000503274 ACTL7BQ9Y614 415 aa9.65□□□□□ -0.86
NIPBL-203ENST00000503274 BMP3P12645 472 aa9.64□□□□□ -0.87
NIPBL-203ENST00000503274 PTPN11Q06124 597 aaPredicted RBP9.64□□□□□ -0.87
NIPBL-203ENST00000503274 TRIM42Q8IWZ5 723 aa9.64□□□□□ -0.87
NIPBL-203ENST00000503274 GSX1Q9H4S2 264 aaPredicted RBP9.64□□□□□ -0.87
NIPBL-203ENST00000503274 MINDY4BA8MYZ0 360 aa9.63□□□□□ -0.87
NIPBL-203ENST00000503274 PF4P02776 101 aa9.63□□□□□ -0.87
NIPBL-203ENST00000503274 ASPAP45381 313 aa9.63□□□□□ -0.87
NIPBL-203ENST00000503274 LMNB2Q03252 620 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms