RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PRDX5P30044 214 aa25.93■■□□□ 1.74
PTPN13-205ENST00000502971 GIMAP6Q6P9H5 292 aa25.93■■□□□ 1.74
PTPN13-205ENST00000502971 MASTLQ96GX5 879 aa25.93■■□□□ 1.74
PTPN13-205ENST00000502971 CD209Q9NNX6 404 aa25.93■■□□□ 1.74
PTPN13-205ENST00000502971 PDIA3P30101 505 aaKnown RBP25.92■■□□□ 1.74
PTPN13-205ENST00000502971 AKNAD1Q5T1N1 836 aa25.92■■□□□ 1.74
PTPN13-205ENST00000502971 LARP1BQ659C4 914 aaKnown RBP25.92■■□□□ 1.74
PTPN13-205ENST00000502971 STAG1Q8WVM7 1258 aa25.92■■□□□ 1.74
PTPN13-205ENST00000502971 POLLQ9UGP5 575 aa25.92■■□□□ 1.74
PTPN13-205ENST00000502971 MTMR6Q9Y217 621 aa25.92■■□□□ 1.74
PTPN13-205ENST00000502971 ATP6V1DQ9Y5K8 247 aa25.92■■□□□ 1.74
PTPN13-205ENST00000502971 DUOX1Q9NRD9 1551 aa25.92■■□□□ 1.74
PTPN13-205ENST00000502971 CCDC88AQ3V6T2 1871 aa25.92■■□□□ 1.74
PTPN13-205ENST00000502971 LTBP1Q14766 1721 aa25.92■■□□□ 1.74
PTPN13-205ENST00000502971 GPR101Q96P66 508 aaPredicted RBP25.91■■□□□ 1.74
PTPN13-205ENST00000502971 KRT23Q9C075 422 aa25.91■■□□□ 1.74
PTPN13-205ENST00000502971 F13A1P00488 732 aa25.91■■□□□ 1.74
PTPN13-205ENST00000502971 LDHBP07195 334 aaKnown RBP25.91■■□□□ 1.74
PTPN13-205ENST00000502971 DYNLL1P63167 89 aaKnown RBP25.91■■□□□ 1.74
PTPN13-205ENST00000502971 DZIP1Q86YF9 867 aaKnown RBP25.91■■□□□ 1.74
PTPN13-205ENST00000502971 SMARCC2Q8TAQ2 1214 aa25.91■■□□□ 1.74
PTPN13-205ENST00000502971 TMEM87BQ96K49 555 aa25.91■■□□□ 1.74
PTPN13-205ENST00000502971 RNF41Q9H4P4 317 aaPredicted RBP25.91■■□□□ 1.74
PTPN13-205ENST00000502971 LMBRD1Q9NUN5 540 aa25.91■■□□□ 1.74
PTPN13-205ENST00000502971 COL11A2P13942 1736 aaPredicted RBP25.9■■□□□ 1.74
PTPN13-205ENST00000502971 DEKP35659 375 aaKnown RBP25.9■■□□□ 1.74
PTPN13-205ENST00000502971 MFSD6Q6ZSS7 791 aa25.9■■□□□ 1.74
PTPN13-205ENST00000502971 SDR42E1Q8WUS8 393 aa25.9■■□□□ 1.74
PTPN13-205ENST00000502971 ANAPC4Q9UJX5 808 aa25.9■■□□□ 1.74
PTPN13-205ENST00000502971 NEDD4P46934 1319 aa25.9■■□□□ 1.74
PTPN13-205ENST00000502971 KIAA1551Q9HCM1 1747 aa25.9■■□□□ 1.74
PTPN13-205ENST00000502971 POLD1P28340 1107 aa25.89■■□□□ 1.74
PTPN13-205ENST00000502971 GSTO1P78417 241 aa25.89■■□□□ 1.74
PTPN13-205ENST00000502971 CTDSPL2Q05D32 466 aa25.89■■□□□ 1.74
PTPN13-205ENST00000502971 B4E1Z4 1266 aa25.88■■□□□ 1.73
PTPN13-205ENST00000502971 C6orf229H3BNL8 230 aa25.88■■□□□ 1.73
PTPN13-205ENST00000502971 ZBTB7AO95365 584 aa25.88■■□□□ 1.73
PTPN13-205ENST00000502971 HMGN5P82970 282 aaKnown RBP25.88■■□□□ 1.73
PTPN13-205ENST00000502971 PPARAQ07869 468 aa25.88■■□□□ 1.73
PTPN13-205ENST00000502971 CYB5R4Q7L1T6 521 aa25.88■■□□□ 1.73
PTPN13-205ENST00000502971 CRNKL1Q9BZJ0 848 aaKnown RBP25.88■■□□□ 1.73
PTPN13-205ENST00000502971 ANGEL1Q9UNK9 670 aaKnown RBP25.88■■□□□ 1.73
PTPN13-205ENST00000502971 JAG2Q9Y219 1238 aa25.88■■□□□ 1.73
PTPN13-205ENST00000502971 CHD4Q14839 1912 aa25.88■■□□□ 1.73
PTPN13-205ENST00000502971 NSUN7Q8NE18 718 aaKnown RBP25.88■■□□□ 1.73
PTPN13-205ENST00000502971 TMX4Q9H1E5 349 aaPredicted RBP25.88■■□□□ 1.73
PTPN13-205ENST00000502971 GPHNQ9NQX3 736 aaPredicted RBP25.88■■□□□ 1.73
PTPN13-205ENST00000502971 NAP1L2Q9ULW6 460 aaPredicted RBP25.88■■□□□ 1.73
PTPN13-205ENST00000502971 SH2B2O14492 632 aaPredicted RBP25.87■■□□□ 1.73
PTPN13-205ENST00000502971 MTA3Q9BTC8 594 aa25.87■■□□□ 1.73
PTPN13-205ENST00000502971 KIF3AQ9Y496 699 aa25.87■■□□□ 1.73
PTPN13-205ENST00000502971 KLF18A0A0U1RQI7 1052 aa25.86■■□□□ 1.73
PTPN13-205ENST00000502971 DHX16O60231 1041 aaKnown RBP25.86■■□□□ 1.73
PTPN13-205ENST00000502971 JAK2O60674 1132 aa25.86■■□□□ 1.73
PTPN13-205ENST00000502971 CCT2P78371 535 aaKnown RBP25.86■■□□□ 1.73
PTPN13-205ENST00000502971 KLHL40Q2TBA0 621 aa25.86■■□□□ 1.73
PTPN13-205ENST00000502971 STYK1Q6J9G0 422 aa25.86■■□□□ 1.73
PTPN13-205ENST00000502971 MPNDQ8N594 471 aa25.86■■□□□ 1.73
PTPN13-205ENST00000502971 ATP8A2Q9NTI2 1148 aa25.86■■□□□ 1.73
PTPN13-205ENST00000502971 AATFQ9NY61 560 aaKnown RBP eCLIP25.86■■□□□ 1.73
PTPN13-205ENST00000502971 BRPF3Q9ULD4 1205 aa25.86■■□□□ 1.73
PTPN13-205ENST00000502971 VPS37CA5D8V6 355 aaPredicted RBP25.85■■□□□ 1.73
PTPN13-205ENST00000502971 PSDA5PKW4 1024 aaPredicted RBP25.85■■□□□ 1.73
PTPN13-205ENST00000502971 PRPF40AO75400 957 aaKnown RBP25.85■■□□□ 1.73
PTPN13-205ENST00000502971 DTNBO60941 627 aa25.85■■□□□ 1.73
PTPN13-205ENST00000502971 CTDNEP1O95476 244 aa25.85■■□□□ 1.73
PTPN13-205ENST00000502971 LDHCP07864 332 aa25.85■■□□□ 1.73
PTPN13-205ENST00000502971 PCP11498 1178 aaKnown RBP25.85■■□□□ 1.73
PTPN13-205ENST00000502971 C2CD5Q86YS7 1000 aa25.85■■□□□ 1.73
PTPN13-205ENST00000502971 FAM184AQ8NB25 1140 aa25.85■■□□□ 1.73
PTPN13-205ENST00000502971 TBC1D22AQ8WUA7 517 aa25.85■■□□□ 1.73
PTPN13-205ENST00000502971 COA1Q9GZY4 146 aa25.85■■□□□ 1.73
PTPN13-205ENST00000502971 ZSWIM5Q9P217 1185 aa25.85■■□□□ 1.73
PTPN13-205ENST00000502971 TACC3Q9Y6A5 838 aa25.85■■□□□ 1.73
PTPN13-205ENST00000502971 DDX49Q9Y6V7 483 aaKnown RBP25.85■■□□□ 1.73
PTPN13-205ENST00000502971 H0YIN7 160 aa25.84■■□□□ 1.73
PTPN13-205ENST00000502971 IGDCC4Q8TDY8 1250 aa25.84■■□□□ 1.73
PTPN13-205ENST00000502971 C10orf71Q711Q0 1435 aa25.84■■□□□ 1.73
PTPN13-205ENST00000502971 PTPDC1A2A3K4 754 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 GOLGA8BA8MQT2 603 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 MINDY4BA8MYZ0 360 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 KDM4AO75164 1064 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 LIFRP42702 1097 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 CERS3Q8IU89 383 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 NKX2-3Q8TAU0 364 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 CHAMP1Q96JM3 812 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 INCENPQ9NQS7 918 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 HPS5Q9UPZ3 1129 aa25.83■■□□□ 1.73
PTPN13-205ENST00000502971 ATF5Q9Y2D1 282 aaPredicted RBP25.83■■□□□ 1.73
PTPN13-205ENST00000502971 DPP8Q6V1X1 898 aaPredicted RBP25.83■■□□□ 1.72
PTPN13-205ENST00000502971 SGMS1Q86VZ5 419 aa25.83■■□□□ 1.72
PTPN13-205ENST00000502971 ZNF622Q969S3 477 aaKnown RBP eCLIP25.83■■□□□ 1.72
PTPN13-205ENST00000502971 NCOA5Q9HCD5 579 aaKnown RBP25.83■■□□□ 1.72
PTPN13-205ENST00000502971 FAM205AQ6ZU69 1335 aa25.83■■□□□ 1.72
PTPN13-205ENST00000502971 BAG3O95817 575 aa25.82■■□□□ 1.72
PTPN13-205ENST00000502971 PPP4CP60510 307 aa25.81■■□□□ 1.72
PTPN13-205ENST00000502971 SART3Q15020 963 aaKnown RBP25.81■■□□□ 1.72
PTPN13-205ENST00000502971 TMEM67Q5HYA8 995 aa25.81■■□□□ 1.72
PTPN13-205ENST00000502971 CTR9Q6PD62 1173 aa25.81■■□□□ 1.72
PTPN13-205ENST00000502971 CDC37L1Q7L3B6 337 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms