RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 DEFB129Q9H1M3 183 aa30.53■■■□□ 2.48
LSM6-202ENST00000502781 VEZTQ9HBM0 779 aa30.53■■■□□ 2.48
LSM6-202ENST00000502781 PPP2R3BQ9Y5P8 575 aa30.53■■■□□ 2.48
LSM6-202ENST00000502781 DOCK2Q92608 1830 aa30.53■■■□□ 2.48
LSM6-202ENST00000502781 MAST2Q6P0Q8 1798 aa30.52■■■□□ 2.48
LSM6-202ENST00000502781 MYO5AQ9Y4I1 1855 aaKnown RBP30.52■■■□□ 2.48
LSM6-202ENST00000502781 BTDP43251 543 aa30.52■■■□□ 2.48
LSM6-202ENST00000502781 PDE1AP54750 535 aa30.52■■■□□ 2.48
LSM6-202ENST00000502781 TNFAIP1Q13829 316 aa30.52■■■□□ 2.48
LSM6-202ENST00000502781 CDCA5Q96FF9 252 aa30.52■■■□□ 2.48
LSM6-202ENST00000502781 ADGRA1Q86SQ6 560 aa30.51■■■□□ 2.47
LSM6-202ENST00000502781 RHBDL3P58872 404 aa30.5■■■□□ 2.47
LSM6-202ENST00000502781 USP40Q9NVE5 1235 aa30.5■■■□□ 2.47
LSM6-202ENST00000502781 TMOD2Q9NZR1 351 aa30.5■■■□□ 2.47
LSM6-202ENST00000502781 TMEM88BA6NKF7 163 aa30.49■■■□□ 2.47
LSM6-202ENST00000502781 CELF2O95319 508 aaKnown RBP30.49■■■□□ 2.47
LSM6-202ENST00000502781 CACNB3P54284 484 aa30.49■■■□□ 2.47
LSM6-202ENST00000502781 PPP4CP60510 307 aa30.49■■■□□ 2.47
LSM6-202ENST00000502781 RASA3Q14644 834 aa30.49■■■□□ 2.47
LSM6-202ENST00000502781 CREBZFQ9NS37 354 aa30.49■■■□□ 2.47
LSM6-202ENST00000502781 CNTNAP1P78357 1384 aa30.48■■■□□ 2.47
LSM6-202ENST00000502781 RFX7Q2KHR2 1363 aa30.48■■■□□ 2.47
LSM6-202ENST00000502781 TCP10L2B9ZVM9 353 aa30.48■■■□□ 2.47
LSM6-202ENST00000502781 MAP4K4O95819 1239 aaPredicted RBP30.48■■■□□ 2.47
LSM6-202ENST00000502781 FAM83AQ86UY5 434 aa30.48■■■□□ 2.47
LSM6-202ENST00000502781 MAGEB6Q8N7X4 407 aa30.48■■■□□ 2.47
LSM6-202ENST00000502781 IDI2Q9BXS1 227 aa30.48■■■□□ 2.47
LSM6-202ENST00000502781 CYP7A1P22680 504 aa30.47■■■□□ 2.47
LSM6-202ENST00000502781 PRAMEF18Q5VWM3 479 aa30.47■■■□□ 2.47
LSM6-202ENST00000502781 PLEKHM2Q8IWE5 1019 aa30.47■■■□□ 2.47
LSM6-202ENST00000502781 OSBPL3Q9H4L5 887 aa30.47■■■□□ 2.47
LSM6-202ENST00000502781 TRPM7Q96QT4 1865 aa30.46■■■□□ 2.47
LSM6-202ENST00000502781 PDE6AP16499 860 aa30.46■■■□□ 2.47
LSM6-202ENST00000502781 TNNI2P48788 182 aa30.46■■■□□ 2.47
LSM6-202ENST00000502781 SLC9C2Q5TAH2 1124 aa30.46■■■□□ 2.47
LSM6-202ENST00000502781 TEPSINQ96N21 525 aa30.46■■■□□ 2.47
LSM6-202ENST00000502781 TCRBV5S4A2TA0A5A2 114 aa30.45■■■□□ 2.47
LSM6-202ENST00000502781 WDHD1O75717 1129 aaPredicted RBP30.45■■■□□ 2.47
LSM6-202ENST00000502781 NFIAQ12857 509 aa30.45■■■□□ 2.47
LSM6-202ENST00000502781 KBTBD3Q8NAB2 608 aa30.45■■■□□ 2.47
LSM6-202ENST00000502781 FAM198AQ9UFP1 575 aa30.45■■■□□ 2.47
LSM6-202ENST00000502781 ERICH6BQ5W0A0 696 aa30.44■■■□□ 2.46
LSM6-202ENST00000502781 ZNF408Q9H9D4 720 aa30.44■■■□□ 2.46
LSM6-202ENST00000502781 BAG3O95817 575 aa30.43■■■□□ 2.46
LSM6-202ENST00000502781 ADD2P35612 726 aa30.43■■■□□ 2.46
LSM6-202ENST00000502781 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.43■■■□□ 2.46
LSM6-202ENST00000502781 TMEM39BQ9GZU3 492 aa30.43■■■□□ 2.46
LSM6-202ENST00000502781 AATFQ9NY61 560 aaKnown RBP eCLIP30.43■■■□□ 2.46
LSM6-202ENST00000502781 RPAP1Q9BWH6 1393 aaPredicted RBP30.43■■■□□ 2.46
LSM6-202ENST00000502781 NPM3O75607 178 aaKnown RBP30.42■■■□□ 2.46
LSM6-202ENST00000502781 PDE4AP27815 886 aa30.42■■■□□ 2.46
LSM6-202ENST00000502781 CENPQQ7L2Z9 268 aaPredicted RBP30.42■■■□□ 2.46
LSM6-202ENST00000502781 FAM151AQ8WW52 585 aa30.42■■■□□ 2.46
LSM6-202ENST00000502781 ZNF532Q9HCE3 1301 aa30.42■■■□□ 2.46
LSM6-202ENST00000502781 PLCG2P16885 1265 aa30.41■■■□□ 2.46
LSM6-202ENST00000502781 HTRA3P83110 453 aa30.41■■■□□ 2.46
LSM6-202ENST00000502781 CDAN1Q8IWY9 1227 aa30.41■■■□□ 2.46
LSM6-202ENST00000502781 NOL10Q9BSC4 688 aaKnown RBP30.41■■■□□ 2.46
LSM6-202ENST00000502781 GBA2Q9HCG7 927 aaPredicted RBP30.41■■■□□ 2.46
LSM6-202ENST00000502781 SSC5DA1L4H1 1573 aa30.41■■■□□ 2.46
LSM6-202ENST00000502781 ENTPD3O75355 529 aa30.41■■■□□ 2.46
LSM6-202ENST00000502781 UBE3CQ15386 1083 aa30.41■■■□□ 2.46
LSM6-202ENST00000502781 NBPF12Q5TAG4 269 aaPredicted RBP30.41■■■□□ 2.46
LSM6-202ENST00000502781 CERS3Q8IU89 383 aa30.41■■■□□ 2.46
LSM6-202ENST00000502781 DDX4Q9NQI0 724 aaKnown RBP30.41■■■□□ 2.46
LSM6-202ENST00000502781 TLL2Q9Y6L7 1015 aa30.41■■■□□ 2.46
LSM6-202ENST00000502781 RGS3P49796 1198 aa30.4■■■□□ 2.46
LSM6-202ENST00000502781 FKBP1BP68106 108 aa30.4■■■□□ 2.46
LSM6-202ENST00000502781 SUPT20HL1Q3ZLR7 823 aa30.4■■■□□ 2.46
LSM6-202ENST00000502781 SH3RF3Q8TEJ3 882 aaPredicted RBP30.4■■■□□ 2.46
LSM6-202ENST00000502781 RIOK1Q9BRS2 568 aaKnown RBP30.4■■■□□ 2.46
LSM6-202ENST00000502781 NF2P35240 595 aa30.39■■■□□ 2.45
LSM6-202ENST00000502781 DYNLL1P63167 89 aaKnown RBP30.39■■■□□ 2.45
LSM6-202ENST00000502781 ZSCAN25Q6NSZ9 544 aa30.39■■■□□ 2.45
LSM6-202ENST00000502781 SAPCD2Q86UD0 394 aa30.39■■■□□ 2.45
LSM6-202ENST00000502781 MIGA1Q8NAN2 632 aa30.39■■■□□ 2.45
LSM6-202ENST00000502781 CHGBP05060 677 aa30.38■■■□□ 2.45
LSM6-202ENST00000502781 ZFPM1Q8IX07 1006 aa30.38■■■□□ 2.45
LSM6-202ENST00000502781 TEX11Q8IYF3 940 aa30.38■■■□□ 2.45
LSM6-202ENST00000502781 C2orf69Q8N8R5 385 aa30.38■■■□□ 2.45
LSM6-202ENST00000502781 CCDC136Q96JN2 1154 aa30.38■■■□□ 2.45
LSM6-202ENST00000502781 TCP10Q12799 353 aa30.37■■■□□ 2.45
LSM6-202ENST00000502781 SLFNL1Q499Z3 407 aa30.37■■■□□ 2.45
LSM6-202ENST00000502781 RASSF10A6NK89 507 aa30.36■■■□□ 2.45
LSM6-202ENST00000502781 EVI5LQ96CN4 794 aa30.36■■■□□ 2.45
LSM6-202ENST00000502781 PAPPA2Q9BXP8 1791 aa30.35■■■□□ 2.45
LSM6-202ENST00000502781 MAP3K11Q16584 847 aa30.35■■■□□ 2.45
LSM6-202ENST00000502781 HHIPL1Q96JK4 782 aa30.35■■■□□ 2.45
LSM6-202ENST00000502781 MAGEB6P1A0A0J9YX57 407 aa30.34■■■□□ 2.45
LSM6-202ENST00000502781 ZFYP08048 801 aaPredicted RBP30.34■■■□□ 2.45
LSM6-202ENST00000502781 PICALMQ13492 652 aa30.34■■■□□ 2.45
LSM6-202ENST00000502781 SH3BP5LQ7L8J4 393 aa30.34■■■□□ 2.45
LSM6-202ENST00000502781 ABT1Q9ULW3 272 aaKnown RBP30.34■■■□□ 2.45
LSM6-202ENST00000502781 ATRNL1Q5VV63 1379 aa30.34■■■□□ 2.45
LSM6-202ENST00000502781 RNF113AO15541 343 aaKnown RBP30.33■■■□□ 2.45
LSM6-202ENST00000502781 TICAM2Q86XR7 235 aa30.33■■■□□ 2.45
LSM6-202ENST00000502781 DNAJC5GQ8N7S2 189 aa30.33■■■□□ 2.45
LSM6-202ENST00000502781 OSBPL5Q9H0X9 879 aaPredicted RBP30.33■■■□□ 2.45
LSM6-202ENST00000502781 COL2A1P02458 1487 aaPredicted RBP30.33■■■□□ 2.45
LSM6-202ENST00000502781 HUNKP57058 714 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms