RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 KLHL23Q8NBE8 558 aa9.95□□□□□ -0.82
NEDD4-203ENST00000502612 CORO1BQ9BR76 489 aa9.95□□□□□ -0.82
NEDD4-203ENST00000502612 EMILIN2Q9BXX0 1053 aa9.95□□□□□ -0.82
NEDD4-203ENST00000502612 MIR1-1HGQ9H1L0 117 aa9.95□□□□□ -0.82
NEDD4-203ENST00000502612 SUPT16HQ9Y5B9 1047 aaKnown RBP9.95□□□□□ -0.82
NEDD4-203ENST00000502612 LOC100289279A0A1B0GTE1 492 aa9.94□□□□□ -0.82
NEDD4-203ENST00000502612 WISP1O95388 367 aa9.94□□□□□ -0.82
NEDD4-203ENST00000502612 CYP11A1P05108 521 aa9.94□□□□□ -0.82
NEDD4-203ENST00000502612 LMNB1P20700 586 aa9.94□□□□□ -0.82
NEDD4-203ENST00000502612 LRRC14Q15048 493 aa9.94□□□□□ -0.82
NEDD4-203ENST00000502612 FMR1NBQ8N0W7 255 aaPredicted RBP9.94□□□□□ -0.82
NEDD4-203ENST00000502612 GPBAR1Q8TDU6 330 aa9.94□□□□□ -0.82
NEDD4-203ENST00000502612 SREK1Q8WXA9 508 aaKnown RBP9.94□□□□□ -0.82
NEDD4-203ENST00000502612 WDR89Q96FK6 387 aaPredicted RBP9.94□□□□□ -0.82
NEDD4-203ENST00000502612 CNTNAP5Q8WYK1 1306 aa9.93□□□□□ -0.82
NEDD4-203ENST00000502612 ZNF862O60290 1169 aa9.93□□□□□ -0.82
NEDD4-203ENST00000502612 LIG1P18858 919 aa9.93□□□□□ -0.82
NEDD4-203ENST00000502612 FAM196AQ6ZSG2 479 aa9.93□□□□□ -0.82
NEDD4-203ENST00000502612 FBXO11Q86XK2 927 aa9.93□□□□□ -0.82
NEDD4-203ENST00000502612 SLC43A3Q8NBI5 491 aa9.93□□□□□ -0.82
NEDD4-203ENST00000502612 FAM221AA4D161 298 aa9.92□□□□□ -0.82
NEDD4-203ENST00000502612 DLL1O00548 723 aa9.92□□□□□ -0.82
NEDD4-203ENST00000502612 GNB5O14775 395 aa9.92□□□□□ -0.82
NEDD4-203ENST00000502612 GNL2Q13823 731 aaKnown RBP9.92□□□□□ -0.82
NEDD4-203ENST00000502612 PDE3AQ14432 1141 aa9.92□□□□□ -0.82
NEDD4-203ENST00000502612 MAP4K3Q8IVH8 894 aa9.92□□□□□ -0.82
NEDD4-203ENST00000502612 DTWD1Q8N5C7 304 aa9.92□□□□□ -0.82
NEDD4-203ENST00000502612 ZSCAN1Q8NBB4 408 aa9.92□□□□□ -0.82
NEDD4-203ENST00000502612 NT5C1AQ9BXI3 368 aa9.92□□□□□ -0.82
NEDD4-203ENST00000502612 CACNA2D2Q9NY47 1150 aa9.92□□□□□ -0.82
NEDD4-203ENST00000502612 TRIM37O94972 964 aa9.91□□□□□ -0.82
NEDD4-203ENST00000502612 RASGRP4Q8TDF6 673 aa9.91□□□□□ -0.82
NEDD4-203ENST00000502612 GATAD2BQ8WXI9 593 aa9.91□□□□□ -0.82
NEDD4-203ENST00000502612 TANGO6Q9C0B7 1094 aa9.91□□□□□ -0.82
NEDD4-203ENST00000502612 GINM1Q9NU53 330 aa9.91□□□□□ -0.82
NEDD4-203ENST00000502612 PPP1R1BQ9UD71 204 aaPredicted RBP9.91□□□□□ -0.82
NEDD4-203ENST00000502612 PRKAG2Q9UGJ0 569 aa9.91□□□□□ -0.82
NEDD4-203ENST00000502612 MKL2Q9ULH7 1088 aa9.91□□□□□ -0.82
NEDD4-203ENST00000502612 NISCHQ9Y2I1 1504 aa9.91□□□□□ -0.82
NEDD4-203ENST00000502612 RAC1P63000 192 aa9.9□□□□□ -0.82
NEDD4-203ENST00000502612 APOBRQ0VD83 1088 aa9.9□□□□□ -0.82
NEDD4-203ENST00000502612 SEZ6Q53EL9 994 aa9.9□□□□□ -0.82
NEDD4-203ENST00000502612 ACSBG1Q96GR2 724 aa9.9□□□□□ -0.82
NEDD4-203ENST00000502612 EFR3BQ9Y2G0 817 aa9.9□□□□□ -0.82
NEDD4-203ENST00000502612 CILPO75339 1184 aa9.89□□□□□ -0.83
NEDD4-203ENST00000502612 ATF4P18848 351 aaPredicted RBP9.89□□□□□ -0.83
NEDD4-203ENST00000502612 ARID5AQ03989 594 aa9.89□□□□□ -0.83
NEDD4-203ENST00000502612 SHISA2Q6UWI4 295 aa9.89□□□□□ -0.83
NEDD4-203ENST00000502612 PCDHA4Q9UN74 947 aa9.89□□□□□ -0.83
NEDD4-203ENST00000502612 ADAMTS8Q9UP79 889 aa9.89□□□□□ -0.83
NEDD4-203ENST00000502612 FGRP09769 529 aa9.88□□□□□ -0.83
NEDD4-203ENST00000502612 NASPP49321 788 aaPredicted RBP9.88□□□□□ -0.83
NEDD4-203ENST00000502612 INPP5AQ14642 412 aa9.88□□□□□ -0.83
NEDD4-203ENST00000502612 CCDC84Q86UT8 332 aaPredicted RBP9.88□□□□□ -0.83
NEDD4-203ENST00000502612 MCF2L2Q86YR7 1114 aa9.88□□□□□ -0.83
NEDD4-203ENST00000502612 NKD1Q969G9 470 aa9.88□□□□□ -0.83
NEDD4-203ENST00000502612 GMLQ99445 158 aa9.88□□□□□ -0.83
NEDD4-203ENST00000502612 WDR18Q9BV38 432 aa9.88□□□□□ -0.83
NEDD4-203ENST00000502612 KRT82Q9NSB4 513 aa9.88□□□□□ -0.83
NEDD4-203ENST00000502612 TRIM28Q13263 835 aaKnown RBP9.87□□□□□ -0.83
NEDD4-203ENST00000502612 GRIK4Q16099 956 aa9.87□□□□□ -0.83
NEDD4-203ENST00000502612 DUOXA2Q1HG44 320 aa9.87□□□□□ -0.83
NEDD4-203ENST00000502612 LRFN4Q6PJG9 635 aa9.87□□□□□ -0.83
NEDD4-203ENST00000502612 KIAA1211Q6ZU35 1233 aa9.87□□□□□ -0.83
NEDD4-203ENST00000502612 ACAD11Q709F0 780 aa9.87□□□□□ -0.83
NEDD4-203ENST00000502612 DHX38Q92620 1227 aaKnown RBP9.87□□□□□ -0.83
NEDD4-203ENST00000502612 DRC1Q96MC2 740 aa9.87□□□□□ -0.83
NEDD4-203ENST00000502612 CSADQ9Y600 493 aa9.87□□□□□ -0.83
NEDD4-203ENST00000502612 MPP2Q14168 576 aa9.86□□□□□ -0.83
NEDD4-203ENST00000502612 SF3A1Q15459 793 aaKnown RBP9.86□□□□□ -0.83
NEDD4-203ENST00000502612 WIPI1Q5MNZ9 446 aaPredicted RBP9.86□□□□□ -0.83
NEDD4-203ENST00000502612 REC114Q7Z4M0 266 aa9.86□□□□□ -0.83
NEDD4-203ENST00000502612 SLITRK4Q8IW52 837 aa9.86□□□□□ -0.83
NEDD4-203ENST00000502612 PLPPR2Q96GM1 343 aa9.86□□□□□ -0.83
NEDD4-203ENST00000502612 LRRC3Q9BY71 257 aa9.86□□□□□ -0.83
NEDD4-203ENST00000502612 BRMS1Q9HCU9 246 aa9.86□□□□□ -0.83
NEDD4-203ENST00000502612 DCDC2CA8MYV0 355 aa9.85□□□□□ -0.83
NEDD4-203ENST00000502612 GRIN3BO60391 1043 aa9.85□□□□□ -0.83
NEDD4-203ENST00000502612 AOC2O75106 756 aa9.85□□□□□ -0.83
NEDD4-203ENST00000502612 RPL6Q02878 288 aaKnown RBP9.85□□□□□ -0.83
NEDD4-203ENST00000502612 KIF4BQ2VIQ3 1234 aa9.85□□□□□ -0.83
NEDD4-203ENST00000502612 CCDC81Q6ZN84 652 aa9.85□□□□□ -0.83
NEDD4-203ENST00000502612 AGGF1Q8N302 714 aaeCLIP9.85□□□□□ -0.83
NEDD4-203ENST00000502612 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.85□□□□□ -0.83
NEDD4-203ENST00000502612 RUSC1Q9BVN2 902 aa9.85□□□□□ -0.83
NEDD4-203ENST00000502612 POLR3KQ9Y2Y1 108 aaPredicted RBP9.85□□□□□ -0.83
NEDD4-203ENST00000502612 PCDHGC5Q9Y5F6 944 aa9.85□□□□□ -0.83
NEDD4-203ENST00000502612 BPNT1O95861 308 aa9.84□□□□□ -0.83
NEDD4-203ENST00000502612 ELNP15502 786 aa9.84□□□□□ -0.83
NEDD4-203ENST00000502612 COL8A1P27658 744 aa9.84□□□□□ -0.83
NEDD4-203ENST00000502612 SOX9P48436 509 aa9.84□□□□□ -0.83
NEDD4-203ENST00000502612 VPS37DQ86XT2 251 aa9.84□□□□□ -0.83
NEDD4-203ENST00000502612 PPT2Q9UMR5 302 aa9.84□□□□□ -0.83
NEDD4-203ENST00000502612 EIF4EBP3O60516 100 aaPredicted RBP9.83□□□□□ -0.84
NEDD4-203ENST00000502612 MCM4P33991 863 aa9.83□□□□□ -0.84
NEDD4-203ENST00000502612 CWF19L2Q2TBE0 894 aaKnown RBP9.83□□□□□ -0.84
NEDD4-203ENST00000502612 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
NEDD4-203ENST00000502612 SCARA3Q6AZY7 606 aa9.83□□□□□ -0.84
NEDD4-203ENST00000502612 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.83□□□□□ -0.84
NEDD4-203ENST00000502612 PODNQ7Z5L7 613 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms