RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 KCNA4P22459 653 aa12.46□□□□□ -0.41
AC055713.1-201ENST00000498967 HPDP32754 393 aaPredicted RBP12.46□□□□□ -0.42
AC055713.1-201ENST00000498967 VTI1AQ96AJ9 217 aa12.46□□□□□ -0.42
AC055713.1-201ENST00000498967 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.42
AC055713.1-201ENST00000498967 IFNA8P32881 189 aa12.46□□□□□ -0.42
AC055713.1-201ENST00000498967 NECAB1Q8N987 351 aa12.46□□□□□ -0.42
AC055713.1-201ENST00000498967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 SKOR1P84550 965 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 APLFQ8IW19 511 aaPredicted RBP12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 ANKRD30BQ9BXX2 1392 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 IPO11Q9UI26 975 aaKnown RBP12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 TSKSQ9UJT2 592 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 PDE6AP16499 860 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 PRKAR2BP31323 418 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 LRGUKQ96M69 825 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 IWS1Q96ST2 819 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 HOMER3Q9NSC5 361 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 TPX2Q9ULW0 747 aaKnown RBP12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 NEK2P51955 445 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 DUSP27Q5VZP5 1158 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 JADE1Q6IE81 842 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 CTAGE3PQ8IX95 158 aa12.45□□□□□ -0.42
AC055713.1-201ENST00000498967 GRIN1Q05586 938 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 NMIQ13287 307 aaPredicted RBP12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 MAP7D3Q8IWC1 876 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 TMX1Q9H3N1 280 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 SPOPO43791 374 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 C8orf74Q6P047 294 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 SYCE1Q8N0S2 351 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 ZGPATQ8N5A5 531 aaKnown RBP12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 FAM200AQ8TCP9 573 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 NACA2Q9H009 215 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 RAB17Q9H0T7 212 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 PALMDQ9NP74 551 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 ZSCAN32Q9NX65 697 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 GTPBP10A4D1E9 387 aaKnown RBP12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 EEF1DP29692 281 aaKnown RBP12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 NUDCD3Q8IVD9 361 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 NUB1Q9Y5A7 615 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 SPDYE3A6NKU9 549 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 GJC1P36383 396 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 GSTO1P78417 241 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 RNASELQ05823 741 aaKnown RBP12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 RPAINQ86UA6 219 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 SMAP1Q8IYB5 467 aaPredicted RBP12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 TROQ12816 1431 aaPredicted RBP12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 GABPB1Q06547 395 aaPredicted RBP12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 NOLC1Q14978 699 aaKnown RBP eCLIP12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 MFSD6Q6ZSS7 791 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 PODNQ7Z5L7 613 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 CFTRP13569 1480 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 NUMA1Q14980 2115 aa12.44□□□□□ -0.42
AC055713.1-201ENST00000498967 GSTA1P08263 222 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 GSTA2P09210 222 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 SUFUQ9UMX1 484 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 PTGS1P23219 599 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 ZNF449Q6P9G9 518 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 RNF34Q969K3 372 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 ZKSCAN3Q9BRR0 538 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 STK24Q9Y6E0 443 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 TMEM110-MUSTN1A8MSY1 372 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 BRDTQ58F21 947 aaPredicted RBP12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 TEX9Q8N6V9 391 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 TRIM8Q9BZR9 551 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 NOB1Q9ULX3 412 aaKnown RBP12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 MCM7P33993 719 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 SMTNP53814 917 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 BIN1O00499 593 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 KRT15P19012 456 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 RRAGBQ5VZM2 374 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 HECW1Q76N89 1606 aa12.43□□□□□ -0.42
AC055713.1-201ENST00000498967 TMEM132EQ6IEE7 984 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 CNNM2Q9H8M5 875 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 CASC4Q6P4E1 433 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 CYP26C1Q6V0L0 522 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 MMEL1Q495T6 779 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 F8W8V4 182 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 CCDC92Q53HC0 331 aaPredicted RBP12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 TTC19Q6DKK2 380 aaPredicted RBP12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 TSPY2A6NKD2 308 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 EXOSC9Q06265 439 aaKnown RBP12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 ARAP1Q96P48 1450 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 PAK2Q13177 524 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 GDAP1L1Q96MZ0 367 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 CCDC159P0C7I6 412 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 IRX5P78411 483 aaPredicted RBP12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 HOMEZQ8IX15 550 aa12.42□□□□□ -0.42
AC055713.1-201ENST00000498967 GUCA1BQ9UMX6 200 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms