RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 LDHBP07195 334 aaKnown RBP14.6□□□□□ -0.07
NUDCD3-211ENST00000497978 GTF2A2P52657 109 aa14.6□□□□□ -0.07
NUDCD3-211ENST00000497978 DCAF15Q66K64 600 aa14.6□□□□□ -0.07
NUDCD3-211ENST00000497978 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.6□□□□□ -0.07
NUDCD3-211ENST00000497978 PA2G4Q9UQ80 394 aaKnown RBP14.6□□□□□ -0.07
NUDCD3-211ENST00000497978 VASPP50552 380 aaPredicted RBP14.59□□□□□ -0.07
NUDCD3-211ENST00000497978 ERO1AQ96HE7 468 aa14.59□□□□□ -0.07
NUDCD3-211ENST00000497978 SRGAP3O43295 1099 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 PHKA1P46020 1223 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 CRHR2Q13324 411 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 ZGPATQ8N5A5 531 aaKnown RBP14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 FRAT1Q92837 279 aaPredicted RBP14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 OTUD5Q96G74 571 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 MS4A4AQ96JQ5 239 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 WRNIP1Q96S55 665 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 PTPN18Q99952 460 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 AKAP2Q9Y2D5 859 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 DAGLAQ9Y4D2 1042 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 TRIM17Q9Y577 477 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 SALL1Q9NSC2 1324 aa14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 RPAP1Q9BWH6 1393 aaPredicted RBP14.58□□□□□ -0.08
NUDCD3-211ENST00000497978 CCL15-CCL14A0A0B4J2E2 113 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 SPDYE5A6NIY4 337 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 WDHD1O75717 1129 aaPredicted RBP14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 PRDX5P30044 214 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 DIXDC1Q155Q3 683 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 CCL15Q16663 113 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 CCDC102BQ68D86 513 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 CDC42EP5Q6NZY7 148 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 ATF7IPQ6VMQ6 1270 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 ERO1BQ86YB8 467 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 FAM151AQ8WW52 585 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 ZNF341Q9BYN7 854 aa14.57□□□□□ -0.08
NUDCD3-211ENST00000497978 GNAI2P04899 355 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 CETPP11597 493 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 TRIM27P14373 513 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 SP3Q02447 781 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 TCP10Q12799 353 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 MTX1Q13505 466 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 OTOP1Q7RTM1 612 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 SLF2Q8IX21 1173 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 BRI3BPQ8WY22 251 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 ZFYVE28Q9HCC9 887 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 USP40Q9NVE5 1235 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 SNCAIPQ9Y6H5 919 aa14.56□□□□□ -0.08
NUDCD3-211ENST00000497978 AK9Q5TCS8 1911 aa14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 BCAR3O75815 825 aa14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 ADORA1P30542 326 aa14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 TIMM10P62072 90 aa14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 TFCP2Q12800 502 aa14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 SNAPC2Q13487 334 aa14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 MVPQ14764 893 aaKnown RBP14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 ARHGEF6Q15052 776 aa14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 SPTY2D1Q68D10 685 aaPredicted RBP14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 MIGA2Q7L4E1 593 aa14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 DZIP1Q86YF9 867 aaKnown RBP14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 CD99L2Q8TCZ2 262 aa14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 ZKSCAN4Q969J2 545 aaPredicted RBP14.55□□□□□ -0.08
NUDCD3-211ENST00000497978 A0A1B0GUL7 405 aa14.54□□□□□ -0.08
NUDCD3-211ENST00000497978 PPIL2Q13356 520 aa14.54□□□□□ -0.08
NUDCD3-211ENST00000497978 CLUAP1Q96AJ1 413 aa14.54□□□□□ -0.08
NUDCD3-211ENST00000497978 XAGE2Q96GT9 111 aa14.54□□□□□ -0.08
NUDCD3-211ENST00000497978 NEUROD6Q96NK8 337 aa14.54□□□□□ -0.08
NUDCD3-211ENST00000497978 EFCC1Q9HA90 598 aa14.54□□□□□ -0.08
NUDCD3-211ENST00000497978 ABCF2Q9UG63 623 aa14.54□□□□□ -0.08
NUDCD3-211ENST00000497978 PDS5AQ29RF7 1337 aaKnown RBP14.54□□□□□ -0.08
NUDCD3-211ENST00000497978 PPATQ06203 517 aa14.53□□□□□ -0.08
NUDCD3-211ENST00000497978 NFIAQ12857 509 aa14.53□□□□□ -0.08
NUDCD3-211ENST00000497978 G3BP1Q13283 466 aaKnown RBP eCLIP14.53□□□□□ -0.08
NUDCD3-211ENST00000497978 RASGRF1Q13972 1273 aa14.53□□□□□ -0.08
NUDCD3-211ENST00000497978 GORABQ5T7V8 394 aa14.53□□□□□ -0.08
NUDCD3-211ENST00000497978 ZKSCAN2Q63HK3 967 aa14.53□□□□□ -0.08
NUDCD3-211ENST00000497978 FAM43AQ8N2R8 423 aa14.53□□□□□ -0.08
NUDCD3-211ENST00000497978 ZCCHC17Q9NP64 241 aaKnown RBP14.53□□□□□ -0.08
NUDCD3-211ENST00000497978 PTPN22Q9Y2R2 807 aa14.53□□□□□ -0.08
NUDCD3-211ENST00000497978 IRF6O14896 467 aa14.52□□□□□ -0.09
NUDCD3-211ENST00000497978 HNRNPUQ00839 825 aaKnown RBP eCLIP14.52□□□□□ -0.09
NUDCD3-211ENST00000497978 FAM198AQ9UFP1 575 aa14.52□□□□□ -0.09
NUDCD3-211ENST00000497978 MYH2Q9UKX2 1941 aa14.52□□□□□ -0.09
NUDCD3-211ENST00000497978 GAKO14976 1311 aa14.51□□□□□ -0.09
NUDCD3-211ENST00000497978 ENTPD3O75355 529 aa14.51□□□□□ -0.09
NUDCD3-211ENST00000497978 INPP5BP32019 993 aa14.51□□□□□ -0.09
NUDCD3-211ENST00000497978 ERICH6Q7L0X2 663 aa14.51□□□□□ -0.09
NUDCD3-211ENST00000497978 IDI2Q9BXS1 227 aa14.51□□□□□ -0.09
NUDCD3-211ENST00000497978 ZNF112Q9UJU3 913 aa14.51□□□□□ -0.09
NUDCD3-211ENST00000497978 TNNQ9UQP3 1299 aa14.51□□□□□ -0.09
NUDCD3-211ENST00000497978 BTBD19C9JJ37 291 aa14.5□□□□□ -0.09
NUDCD3-211ENST00000497978 TLR2O60603 784 aa14.5□□□□□ -0.09
NUDCD3-211ENST00000497978 RGS3P49796 1198 aa14.5□□□□□ -0.09
NUDCD3-211ENST00000497978 KIF22Q14807 665 aa14.5□□□□□ -0.09
NUDCD3-211ENST00000497978 NOL9Q5SY16 702 aaKnown RBP14.5□□□□□ -0.09
NUDCD3-211ENST00000497978 ZSCAN29Q8IWY8 852 aaPredicted RBP14.5□□□□□ -0.09
NUDCD3-211ENST00000497978 TMEM57Q8N5G2 664 aa14.5□□□□□ -0.09
NUDCD3-211ENST00000497978 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.5□□□□□ -0.09
NUDCD3-211ENST00000497978 FAM163AQ96GL9 167 aaPredicted RBP14.5□□□□□ -0.09
NUDCD3-211ENST00000497978 MROH7-TTC4A0A0A0MT08 1334 aa14.49□□□□□ -0.09
NUDCD3-211ENST00000497978 PNMA6EA0A0J9YXQ4 647 aa14.49□□□□□ -0.09
NUDCD3-211ENST00000497978 LDHCP07864 332 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms