RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TAL1P17542 331 aaPredicted RBP6.9□□□□□ -1.3
CBX3-208ENST00000497498 RAB6AP20340 208 aa6.9□□□□□ -1.3
CBX3-208ENST00000497498 PPP1R9AQ9ULJ8 1098 aa6.9□□□□□ -1.3
CBX3-208ENST00000497498 AP4E1Q9UPM8 1137 aa6.9□□□□□ -1.3
CBX3-208ENST00000497498 PAX4O43316 350 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 BRD1O95696 1058 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 PDE3AQ14432 1141 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 DSC3Q14574 896 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 NFXL1Q6ZNB6 911 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 FMNL2Q96PY5 1086 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 CCDC86Q9H6F5 360 aaKnown RBP6.89□□□□□ -1.31
CBX3-208ENST00000497498 C1GALT1Q9NS00 363 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 CCDC39Q9UFE4 941 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 ADGRE2Q9UHX3 823 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 DCTN4Q9UJW0 460 aa6.89□□□□□ -1.31
CBX3-208ENST00000497498 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
CBX3-208ENST00000497498 XRCC5P13010 732 aaKnown RBP6.88□□□□□ -1.31
CBX3-208ENST00000497498 ZNF157P51786 506 aaPredicted RBP6.88□□□□□ -1.31
CBX3-208ENST00000497498 CYP27A1Q02318 531 aa6.88□□□□□ -1.31
CBX3-208ENST00000497498 DUSP27Q5VZP5 1158 aa6.88□□□□□ -1.31
CBX3-208ENST00000497498 WDR89Q96FK6 387 aaPredicted RBP6.88□□□□□ -1.31
CBX3-208ENST00000497498 KRT82Q9NSB4 513 aa6.88□□□□□ -1.31
CBX3-208ENST00000497498 NLRP2Q9NX02 1062 aa6.88□□□□□ -1.31
CBX3-208ENST00000497498 CRIM1Q9NZV1 1036 aa6.88□□□□□ -1.31
CBX3-208ENST00000497498 TMPRSS2O15393 492 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 GSTP1P09211 210 aaKnown RBP6.87□□□□□ -1.31
CBX3-208ENST00000497498 LIG1P18858 919 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 KIF4BQ2VIQ3 1234 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 PI16Q6UXB8 463 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 DTHD1Q6ZMT9 781 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 ZNF765Q7L2R6 523 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 VSIG10LQ86VR7 867 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 ABI1Q8IZP0 508 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 TMEM39AQ9NV64 488 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 BSDC1Q9NW68 430 aaPredicted RBP6.87□□□□□ -1.31
CBX3-208ENST00000497498 PPP4R2Q9NY27 417 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 ANGEL1Q9UNK9 670 aaKnown RBP6.87□□□□□ -1.31
CBX3-208ENST00000497498 PCDHGC5Q9Y5F6 944 aa6.87□□□□□ -1.31
CBX3-208ENST00000497498 TREHO43280 583 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 ZNF862O60290 1169 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 SLFN14P0C7P3 912 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 FCGRTP55899 365 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 PPP2R3AQ06190 1150 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 ENOX2Q16206 610 aaKnown RBP6.86□□□□□ -1.31
CBX3-208ENST00000497498 OGFOD3Q6PK18 319 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 PDZD3Q86UT5 571 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 KRTAP1-3Q8IUG1 177 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 FBXL18Q96ME1 805 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 BCO2Q9BYV7 579 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 BIN2Q9UBW5 565 aaPredicted RBP6.86□□□□□ -1.31
CBX3-208ENST00000497498 DAGLAQ9Y4D2 1042 aa6.86□□□□□ -1.31
CBX3-208ENST00000497498 PLCB3Q01970 1234 aa6.85□□□□□ -1.31
CBX3-208ENST00000497498 ID3Q02535 119 aa6.85□□□□□ -1.31
CBX3-208ENST00000497498 FANCD2OSQ96PS1 177 aa6.85□□□□□ -1.31
CBX3-208ENST00000497498 ZC3H12CQ9C0D7 883 aaKnown RBP6.85□□□□□ -1.31
CBX3-208ENST00000497498 GOLGA2P5Q9HBQ8 144 aa6.85□□□□□ -1.31
CBX3-208ENST00000497498 DISC1Q9NRI5 854 aa6.85□□□□□ -1.31
CBX3-208ENST00000497498 ZC3H7BQ9UGR2 993 aaKnown RBP6.85□□□□□ -1.31
CBX3-208ENST00000497498 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.84□□□□□ -1.31
CBX3-208ENST00000497498 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
CBX3-208ENST00000497498 ATXN3LQ9H3M9 355 aa6.84□□□□□ -1.31
CBX3-208ENST00000497498 GPN3Q9UHW5 284 aaPredicted RBP6.84□□□□□ -1.31
CBX3-208ENST00000497498 PNMA6FA0A0J9YX94 578 aa6.83□□□□□ -1.32
CBX3-208ENST00000497498 MAPK1P28482 360 aa6.83□□□□□ -1.32
CBX3-208ENST00000497498 TXKP42681 527 aa6.83□□□□□ -1.32
CBX3-208ENST00000497498 HNRNPUQ00839 825 aaKnown RBP eCLIP6.83□□□□□ -1.32
CBX3-208ENST00000497498 NXPE4Q6UWF7 544 aa6.83□□□□□ -1.32
CBX3-208ENST00000497498 CBLL1Q75N03 491 aa6.83□□□□□ -1.32
CBX3-208ENST00000497498 STK35Q8TDR2 534 aa6.83□□□□□ -1.32
CBX3-208ENST00000497498 LGR6Q9HBX8 967 aa6.83□□□□□ -1.32
CBX3-208ENST00000497498 LRRC4CQ9HCJ2 640 aa6.83□□□□□ -1.32
CBX3-208ENST00000497498 TIMELESSQ9UNS1 1208 aa6.83□□□□□ -1.32
CBX3-208ENST00000497498 ARNTP27540 789 aa6.82□□□□□ -1.32
CBX3-208ENST00000497498 SULF2Q8IWU5 870 aa6.82□□□□□ -1.32
CBX3-208ENST00000497498 SMYD4Q8IYR2 804 aaPredicted RBP6.82□□□□□ -1.32
CBX3-208ENST00000497498 C3orf58Q8NDZ4 430 aa6.82□□□□□ -1.32
CBX3-208ENST00000497498 PIDD1Q9HB75 910 aa6.82□□□□□ -1.32
CBX3-208ENST00000497498 NME2P22392 152 aa6.81□□□□□ -1.32
CBX3-208ENST00000497498 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
CBX3-208ENST00000497498 CYP27C1Q4G0S4 372 aa6.81□□□□□ -1.32
CBX3-208ENST00000497498 KCNB2Q92953 911 aa6.81□□□□□ -1.32
CBX3-208ENST00000497498 PAK6Q9NQU5 681 aaPredicted RBP6.81□□□□□ -1.32
CBX3-208ENST00000497498 CACNA2D2Q9NY47 1150 aa6.81□□□□□ -1.32
CBX3-208ENST00000497498 AKAP2Q9Y2D5 859 aa6.81□□□□□ -1.32
CBX3-208ENST00000497498 ZNF252P-AS1Q0IIN9 211 aa6.8□□□□□ -1.32
CBX3-208ENST00000497498 CDK5R2Q13319 367 aa6.8□□□□□ -1.32
CBX3-208ENST00000497498 TTLL4Q14679 1199 aa6.8□□□□□ -1.32
CBX3-208ENST00000497498 ZC3H12AQ5D1E8 599 aaKnown RBP6.8□□□□□ -1.32
CBX3-208ENST00000497498 TP53INP2Q8IXH6 220 aa6.8□□□□□ -1.32
CBX3-208ENST00000497498 AGBL5Q8NDL9 886 aa6.8□□□□□ -1.32
CBX3-208ENST00000497498 FBF1Q8TES7 1133 aa6.8□□□□□ -1.32
CBX3-208ENST00000497498 SRCIN1Q9C0H9 1055 aa6.8□□□□□ -1.32
CBX3-208ENST00000497498 RNF114Q9Y508 228 aa6.8□□□□□ -1.32
CBX3-208ENST00000497498 FAM87AP0C7U9 286 aa6.79□□□□□ -1.32
CBX3-208ENST00000497498 ERVK-24P63145 666 aa6.79□□□□□ -1.32
CBX3-208ENST00000497498 FMR1Q06787 632 aaKnown RBP eCLIP6.79□□□□□ -1.32
CBX3-208ENST00000497498 FLCNQ8NFG4 579 aa6.79□□□□□ -1.32
CBX3-208ENST00000497498 BCL7CQ8WUZ0 217 aaPredicted RBP6.79□□□□□ -1.32
CBX3-208ENST00000497498 NECAB3Q96P71 396 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms